Details from NCBI annotation

Gene Symbol Smc6
Gene Name structural maintenance of chromosomes 6
Entrez Gene ID 101718055

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMC6 ENSCPOG00000014752 (Guinea pig)

Gene Details

structural maintenance of chromosomes 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013291, Guinea pig)

Protein Percentage 94.19%
CDS Percentage 92.13%
Ka/Ks Ratio 0.09428 (Ka = 0.0287, Ks = 0.3041)

SMC6 ENSG00000163029 (Human)

Gene Details

structural maintenance of chromosomes 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000404092, Human)

Protein Percentage 89.63%
CDS Percentage 89.48%
Ka/Ks Ratio 0.12525 (Ka = 0.0516, Ks = 0.4121)

Smc6 ENSMUSG00000020608 (Mouse)

Gene Details

structural maintenance of chromosomes 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020931, Mouse)

Protein Percentage 88.0%
CDS Percentage 87.07%
Ka/Ks Ratio 0.11015 (Ka = 0.0615, Ks = 0.5587)

Smc6 ENSRNOG00000004908 (Rat)

Gene Details

structural maintenance of chromosomes 6 (Smc6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007073, Rat)

Protein Percentage 87.91%
CDS Percentage 87.13%
Ka/Ks Ratio 0.11034 (Ka = 0.0614, Ks = 0.5569)

Genome Location

Sequence Coding sequence

Length: 3204 bp    Location: 689611..614015   Strand: -
>XM_004839436.1
ATGGCCAAAAGAAAGGAAGACAGTTTGCCCTCTCCTGAAACTGCCAAAAGACCGAGACGAGAGCCAGAGGATTTCGGTAGAGACAGTGACGAGGACGAATGTTCAGTTTCTTTGACTAAAGGCGGCTCTACTTTGACTGTAGCAGAAGTTGGGATAATTGAGAGTATTCAACTAAGAAACTTCATGTGCCATTCGATGCTTGGGCCCTTCAAGTTCGGTTCTAATGTCAACTTTGTTGTTGGCAACAATGGAAGTGGGAAGAGTGCTGTGCTCACAGCTCTCATTGTCGGGCTTGGTGGAAAAGCAGTCGCTACCAACAGGGGATCCTCTTTAAAAGGCTTTGTCAAAGATGGGCAGAGCTCAGCGGATATCACAGTCACTTTGAGAAACAGAGGAGATGATGCCTATAGAGCAAATGTGTATGGTGACTCCATAGTTGTGCAGCAGCACATCAGCATGGATGGAAGTCGATCCTATAAACTGAAAAGTCAAACAGGTGCTGTGGTTTCTACTAGGAAAGAAGAGCTGATTGCAGTTCTTGATCATTTTAACATCCAGGTAGATAATCCTGTTTCTGTTTTAACACAAGAGATGAGCAAGCAGTTCTTGCAGTCTAAAAATGAGGGCGACAAATACAAAGTAAGTGTCACCAGACGACTCACTGAACTAAAGCGCCAGTGTTTAGAGAAAGAGGAACGTTTTCAAAGTATTGCTGGTTTAAGTACAATGAAGACTAATTTAGAGTATTTGAAACATGAAATGGCCTGGGCAGTGGTCAATGAAATTGAAAAACAGTTGAATGCTATCAGAGATAATATCAAAATTGGAGAAGATCGTGCTGCTAGACTTGACAGGAAAATGGAAGAGCAGCAGGTCAAACTTAATGAAGCAGAAAAAAAATACAAGGATATTCAGGATAAACTGGAAAAGATTAGTCAAGAGACAAATGCACGAGCACCAGAATGTATGGCATTAAAAGCAGATGTCACTGCTAAGAAAAGGGACTATAATGAAGCTGAGGTTTTATATAACCGTTCCCTAAATGAATATAAAGCATTAAAGAAAGATGACGAGCAGCTTTGTAAAAGAATTGAGGAACTTAAAAAAAGTGCTGATCAATTTTTGGAAACAGAACGGTTGGAAAGGCAAAAAAAAATATGTTGGTTAAAAGAGAGATTAAAGGCCTTTCAGGACCAAGAAAATTCAGTCAGTCAAGAGATGGAGCAGTTTCAGCAGGCCACAGAAAAGGGCAGAGAAGAATACGCCCGGATTAGGAGAGAAGAATTAGATGTGAAGCATGCACTGAACTATAATCAGAGGCAACTGAAAGAATTAAAAGATAGTAAAACTGATCGACTAAAACGATTTGGTCCTCATGTTCCAGCTCTTCTGGAAGCAATAGATGATGCTTACCGACGGGGATATTTTACCCATAAACCTGTAGGCCCTTTAGGAGCTTGCATTCATCTTCGGGATCCTGAGCTTGCCTTGGCTGTTGAATCCTGCTTGAAAGGGCTTCTTCAAGCCTACTGCTGCCATAATCATGCTGATGAAAGAGTCCTTCAGGCATTAATGAAAAGATTTTATTCTCCTGGGACCTCACGGCCACAGATAATAGTTTCTGAATTTCAGAATGAGATATATGATGTAAGACACAGAGCTGTTCATCATCCAGAGTTTCCAACAGTGCTGACAGCATTAGAAATAGACAATGCAGTTGTTGCAAATAGCCTGATTGACATGAGAAACATAGAGACTGTGCTGCTAATCAAGAGTAATGCTGTAGCTCGTGCAGTAATGCAGTCCCAACAGCCACCCAAAAATTGTAGAGAAGCTTTTACCGCTGATGGTGATCAGGTTTTTGCAGGACGTTACTATTCATCAGAAAATACAAGGCCTAAGTTCCTAAGCAGAGATGTGGATTCTGAAATAAGCAACTTGGAGAATGAAGTTGAAAATAAGAGAGCCCAGTTAGTAAATCTTCAGCAACATTTATCTGCCCGTGAAAAGGATGTTAAACAAAATGAAGAACTTCTTAAAAGGTGCCAGCTACATTATAAAGAGTTAAAGATGAAAATAAGAAAAAATATTTCTGAAATTCGGGAACTTGAGAATATAGAAGAACACAAATCTGTAGATATTGCAACCTTGGAAGATGAAGCTCATGACAATAAAATCAAAATGAAAATGACTGAGAAACAGATGGAACAACAAAAAGAAAGTTTGGAGCACTTTAAAAGTCTGAAAAAAGAAGCAGAGAACAAGTATGATACAGTTAAATTGAAAATTAATCAACTATCAGAACTAGCAGATCCACTTAAGGACGAATTAAACCTTGCTGATTCTGAAGTGGATAACCAGAAACGAGGGAAGAGGCATTATGAAGATAAGCAAAAAGAACACTTGGATACTTTAAATAAAAAGAAACGAGAACTGGACATGAAAGAAAAGGAGCTAGAGGAGAAAATGTCACAAGCAAGACAGATCTGCCCGGAAAGGATAGAAGTAAAAAAATCTGCATCAATGCTAGATAAAGAAATTAACCGATTACGACAGAAGATACAGGCAGAACATGCTAGTCATGGAGATAGAGAAGAAATAATGAGGCAGTACCAGGAAGCAAGAGAAACTTATCTTGACCTGGATAATAAAGTAAGGACTTTAAAAAGGTTTATTAAATTACTAGAAGAAATAATGACCCACAGATATAAAACATATCAACAATTTAGAAGGTGTTTGACTTTACGATGCAAATTGTACTTTGACAACTTACTGTCACAACGGGCCTATTGTGGAAAAATGAACTTTGACCATAAGAATGAAACTCTTGCTATATCAGTTCAGCCTGGAGAGGGAAACAAAGCTGCCTTCAATGACATGCGAGCGTTGTCTGGCGGCGAACGCTCTTTCTCCACAGTGTGCTTCATCCTTTCCCTGTGGTCCATTGCCGAATCACCTTTCAGATGCCTGGATGAGTTTGATGTCTACATGGATATGGTTAATAGGAGGATTGCCATGGACATGATACTTAAGATGGCAGATTCTCAGCGTTTTAGACAGTTTATCTTGCTTACCCCACAAAGTATGAGTTCACTTCCTTCCAGTAAATTGATTAGAATTCTTCGGATGTCTGATCCTGAAAGAGGACAAACTACGTTGCCTTTCCGACCTGTGACTTGGGAAGATGAGGATGAGCGGAGCTGA

Related Sequences

XP_004839493.1 Protein

Smc6 PREDICTED: structural maintenance of chromosomes protein 6 [Heterocephalus glaber]

Length: 1067 aa      View alignments
>XP_004839493.1
MAKRKEDSLPSPETAKRPRREPEDFGRDSDEDECSVSLTKGGSTLTVAEVGIIESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLKGFVKDGQSSADITVTLRNRGDDAYRANVYGDSIVVQQHISMDGSRSYKLKSQTGAVVSTRKEELIAVLDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKVSVTRRLTELKRQCLEKEERFQSIAGLSTMKTNLEYLKHEMAWAVVNEIEKQLNAIRDNIKIGEDRAARLDRKMEEQQVKLNEAEKKYKDIQDKLEKISQETNARAPECMALKADVTAKKRDYNEAEVLYNRSLNEYKALKKDDEQLCKRIEELKKSADQFLETERLERQKKICWLKERLKAFQDQENSVSQEMEQFQQATEKGREEYARIRREELDVKHALNYNQRQLKELKDSKTDRLKRFGPHVPALLEAIDDAYRRGYFTHKPVGPLGACIHLRDPELALAVESCLKGLLQAYCCHNHADERVLQALMKRFYSPGTSRPQIIVSEFQNEIYDVRHRAVHHPEFPTVLTALEIDNAVVANSLIDMRNIETVLLIKSNAVARAVMQSQQPPKNCREAFTADGDQVFAGRYYSSENTRPKFLSRDVDSEISNLENEVENKRAQLVNLQQHLSAREKDVKQNEELLKRCQLHYKELKMKIRKNISEIRELENIEEHKSVDIATLEDEAHDNKIKMKMTEKQMEQQKESLEHFKSLKKEAENKYDTVKLKINQLSELADPLKDELNLADSEVDNQKRGKRHYEDKQKEHLDTLNKKKRELDMKEKELEEKMSQARQICPERIEVKKSASMLDKEINRLRQKIQAEHASHGDREEIMRQYQEARETYLDLDNKVRTLKRFIKLLEEIMTHRYKTYQQFRRCLTLRCKLYFDNLLSQRAYCGKMNFDHKNETLAISVQPGEGNKAAFNDMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRIAMDMILKMADSQRFRQFILLTPQSMSSLPSSKLIRILRMSDPERGQTTLPFRPVTWEDEDERS