Details from NCBI annotation

Gene Symbol Nrxn1
Gene Name neurexin 1, transcript variant X12
Entrez Gene ID 101713538

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NRXN1 ENSCPOG00000003316 (Guinea pig)

Gene Details

neurexin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002996, Guinea pig)

Protein Percentage 99.41%
CDS Percentage 95.82%
Ka/Ks Ratio 0.03024 (Ka = 0.005, Ks = 0.1659)

NRXN1 ENSG00000179915 (Human)

Gene Details

neurexin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000385142, Human)

Protein Percentage 98.04%
CDS Percentage 92.63%
Ka/Ks Ratio 0.02971 (Ka = 0.0097, Ks = 0.3253)

Nrxn1 ENSMUSG00000024109 (Mouse)

Gene Details

neurexin I

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000125407, Mouse)

Protein Percentage 98.26%
CDS Percentage 90.8%
Ka/Ks Ratio 0.01787 (Ka = 0.0082, Ks = 0.4616)

Nrxn1 ENSRNOG00000027796 (Rat)

Gene Details

neurexin I

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059951, Rat)

Protein Percentage 88.0%
CDS Percentage 83.8%
Ka/Ks Ratio 0.14458 (Ka = 0.0893, Ks = 0.6175)

Genome Location

Sequence Coding sequence

Length: 3990 bp    Location: 32273217..31137465   Strand: -
>XM_004839434.1
ATGACGGTCTTCAGCGGGCTCTTCGTAGGGGGGCTGCCGCCCGAGCTGCGCGCCGCCGCCCTCAAGCTCACCCGCGCCTCGGTGCGCGAGCACGCGCCCTTCCGCGGCTGGATCCGCGACGTGCGGGTGGACGCGGCTCGCACGCTGCCCGAGGACGGCGCCGAGGTGCGGCTGGACGACGACGAGCCCAGCGGCGGGGGACCCTGCGAAGTGGAGGAGGGCGCGGGCGGCGTGTGCCTCAACGGCGGGGTGTGCTCGGTGGTGGACGACCGCGCTGTGTGCGACTGCTCGCGGACTGGCTTCCGCGGCGAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGGAAAAGAAGAATATATTGCCACTTTCAAGGGATCTGAATACTTCTGCTACGACTTGTCTCAAAACCCCATTCAAAGCAGCAGCGATGAAATAACTCTGTCCTTTAAAACCCTTCAGAGGAATGGACTGATGCTTCACACTGGAAAATCAGCTGATTATGTCAATCTTGCCCTGAAAAATGGAGCTGTCTCTCTGGTCATTAATTTGGGATCAGGGGCCTTTGAAGCACTAGTGGAGCCCGTGAATGGAAAGTTTAATGATAATGCCTGGCATGATGTGAAAGTCACCAGGAATCTGCGTCAGCACTCAGGCATTGGACACGCTATGGTAAACAAACTACATTGTTCGGTGACAATATCAGTGGATGGGATTCTTACCACAACGGGCTACACACAAGAAGATTATACCATGCTGGGGTCTGATGACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCCCCAGTCAGTAACAACTTCATGGGCTGTCTCAAAGAGGTTGTATATAAAAATAATGATGTAAGGCTGGAATTATCACGACTTGCCAAACAAGGTGATCCTAAGATGAAGATCCACGGAGTGGTGGCATTTAAGTGTGAAAATGTTGCCACTTTAGACCCAATCACTTTTGAAACCCCAGAGTCTTTCATCTCTTTGCCTAAATGGAATGCAAAGAAGACAGGCTCCATATCATTTGACTTCCGTACAACAGAGCCAAATGGCCTGATCTTATTTAGCCATGGAAAGCCAAGACATCAGAAAGATGCCAAACATCCACAGATGATAAAGGTGGACTTCTTTGCTATTGAGATGCTGGATGGTCACCTCTACCTCCTCCTGGACATGGGGTCAGGTACCATCAAAATAAAAGCCCTGCAGAAGAAAGTGAATGATGGAGAATGGTATCATGTGGACTTCCAGAGAGATGGACGGTCAGGTACCATTTCTGTCAACACACTGCGCACGCCCTATACTGCCCCTGGTGAAAGTGAGATTCTGGACCTGGATGATGAGCTGTACCTGGGAGGCCTGCCAGAAAATAAGGCTGGCCTTGTCTTCCCCACTGAGGTGTGGACTGCTCTGCTCAACTATGGCTACGTGGGCTGCATCCGGGATTTATTCATTGATGGCCAGAGCAAAGACATCCGGCAAATGGCTGAAGTTCAAAGTACTGCTGGAGTGAAGCCCTCCTGCTCCAGGGAAACAGCAAAACCGTGCCTTAGCAATCCTTGCAAAAATAATGGCATGTGCAGGGATGGGTGGAACAGATATGTCTGTGATTGTTCTGGAACAGGCTACCTTGGCAGGTCCTGTGAGAGAGAGGCAACGGTGTTGAGCTATGATGGGAGCATGTTTATGAAGATCCAGCTCCCAGTGGTGATGCATACAGAGGCCGAGGACGTGTCCTTGCGGTTCCGGTCTCAGCGCGCCTATGGCATTCTGATGGCCACCACGTCCAGGGACTCCGCGGACACGCTGCGGCTGGAGCTGGACGCGGGCCGCGTGAAACTGACGGTCAACCTAGATTGTATCAGGATTAACTGTAATTCCAGCAAAGGTCCTGAGACCCTTTTTGCTGGCTATAACCTCAATGATAATGAATGGCACACTGTGCGTGTGGTTCGTCGAGGAAAAAGCTTAAAGTTAACGGTGGATGATCAACAGGCCATGACAGGCCAAATGGCAGGTGACCACACGAGGCTGGAGTTCCACAACATAGAGACTGGCATCATCACAGAACGCCGATATCTGTCCTCTGTGCCCTCCAACTTCATTGGGCACCTGCAGAGCTTGACATTTAATGGAATGGCATACATTGACTTGTGTAAAAACGGTGATATAGATTACTGTGAGCTCAATGCCAGATTTGGCTTCAGGAACATCATTGCAGACCCTGTCACCTTCAAGACCAAATCAAGCTATGTTGCCTTAGCTACATTGCAAGCCTACACTTCTATGCATCTTTTTTTCCAGTTCAAGACCACATCTTTAGATGGACTAATTCTCTATAATAGTGGGGATGGAAATGACTTTATTGTGGTTGAATTAGTTAAAGGGTACTTACATTATGTGTTTGATTTGGGAAATGGTGCTAACCTCATCAAAGGGAGCTCAAACAAACCACTCAACGACAATCAGTGGCACAATGTGATGATATCAAGGGATACCAGCAATCTCCACACTGTAAAAATCGACACAAAAATCACAACACAAATCACTGCTGGAGCCAGGAACTTAGACCTCAAGAGTGACTTGTATATAGGAGGAGTGGCTAAAGAAACCTACAAATCCTTGCCAAAACTGGTCCACGCCAAGGAGGGCTTCCAAGGCTGCCTGGCATCCGTTGACCTAAATGGACGGCTCCCGGACCTCATCTCAGATGCTCTTTTCTGCAATGGACAGATTGAGAGGGGATGTGAAGGTCCTAGCACAACCTGTCAAGAAGACTCGTGTTCCAATCAGGGTGTGTGCTTGCAGCAGTGGGATGGCTTCAGCTGTGACTGCAGCATGACTTCCTTCAGTGGACCTCTCTGCAATGACCCTGGGACAACATATATCTTTAGCAAAGGTGGTGGACAAATCACATATAAGTGGCCTCCTAATGACCGACCAAGTACACGAGCAGACAGACTGGCTATAGGGTTTAGCACTGTGCAGAAGGAAGCTGTATTGGTGCGAGTGGACAGTTCATCAGGCCTGGGTGACTACCTAGAGCTACATATACACCAAGGAAAAATTGGAGTTAAGTTTAATGTTGGGACAGATGACATCGCCATTGAAGAGTCCAATGCAATCATTAATGATGGGAAATACCATGTAGTGCGTTTCACGAGGAGTGGTGGCAATGCCACGTTACAAGTGGACAGCTGGCCAGTGATCGAGCGTTACCCAGCAGGGCGTCAGCTCACAATCTTCAATAGCCAAGCAACCATAATAATTGGCGGGAAAGAGCAGGGCCAGCCCTTCCAGGGCCAGCTCTCTGGGCTTTACTACAATGGCTTGAAAGTTCTGAATATGGCAGCTGAAAACGATGCCAACATCGCCATAGTGGGAAATGTGAGACTAGTTGGTGAAGTGCCTTCCTCTATGACAACTGAGTCGACAGCCACGGCCATGCAGTCAGAGATGTCCACGTCAATCATGGAGACCACCACAACCCTGGCCACAAGCACCGCAAGAAGAGGAAGGCCCCCAACAAAAGAACCTACCACAGATGACATCCTCGTGGCCTCCGCAGAGTGTCCTAGCGATGACGAGGACATTGACCCGTGTGAGCCAAGCTCAGCCAACCCAACCCGAGTGGGCGGAAGGGAGCCATACCCTGGCTCTGCAGAAGTGATCCGGGAGTCCAGCAGCACCACGGGCATGGTCGTTGGGATCGTGGCCGCAGCCGCCCTGTGCATCCTCATCCTCCTCTATGCCATGTACAAGTACAGGAACCGGGATGAAGGCTCATACCACGTGGATGAGAGCCGAAACTACATCAGTAACTCAGCACAGTCCAACGGGGCTGTGGTAAAGGAGAAGCAACCCAGCAGCGCAAAGAGCGCCAACAAAAACAAGAAAAACAAGGATAAAGAGTATTATGTCTGA

Related Sequences

XP_004839491.1 Protein

Nrxn1 PREDICTED: neurexin-1 isoform X12 [Heterocephalus glaber]

Length: 1329 aa      View alignments
>XP_004839491.1
MTVFSGLFVGGLPPELRAAALKLTRASVREHAPFRGWIRDVRVDAARTLPEDGAEVRLDDDEPSGGGPCEVEEGAGGVCLNGGVCSVVDDRAVCDCSRTGFRGEDCSQEDNNVEGLAHLMMGDQGKSKGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQGQPFQGQLSGLYYNGLKVLNMAAENDANIAIVGNVRLVGEVPSSMTTESTATAMQSEMSTSIMETTTTLATSTARRGRPPTKEPTTDDILVASAECPSDDEDIDPCEPSSANPTRVGGREPYPGSAEVIRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPSSAKSANKNKKNKDKEYYV