Details from NCBI annotation

Gene Symbol Msh2
Gene Name mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)
Entrez Gene ID 101706924

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MSH2 ENSCPOG00000014297 (Guinea pig)

Gene Details

mutS homolog 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012880, Guinea pig)

Protein Percentage 95.72%
CDS Percentage 93.83%
Ka/Ks Ratio 0.11016 (Ka = 0.022, Ks = 0.1994)

MSH2 ENSG00000095002 (Human)

Gene Details

mutS homolog 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000233146, Human)

Protein Percentage 94.43%
CDS Percentage 91.9%
Ka/Ks Ratio 0.10894 (Ka = 0.0307, Ks = 0.2814)

Msh2 ENSMUSG00000024151 (Mouse)

Gene Details

mutS homolog 2 (E. coli)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000024967, Mouse)

Protein Percentage 92.4%
CDS Percentage 86.87%
Ka/Ks Ratio 0.07368 (Ka = 0.0411, Ks = 0.5582)

Msh2 ENSRNOG00000015796 (Rat)

Gene Details

mutS homolog 2 (E. coli) (Msh2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021538, Rat)

Protein Percentage 92.07%
CDS Percentage 86.78%
Ka/Ks Ratio 0.07393 (Ka = 0.0415, Ks = 0.5612)

Genome Location

Sequence Coding sequence

Length: 2805 bp    Location: 28780614..28861523   Strand: +
>XM_004839408.1
ATGGCTGTGCAGCCCAAAGAGACGCTGCAGCTGGAGAGCGCGGCCGAGATCGGCTTCGTGCGTTTCTTCCAGGCCATGCCGGGGAAGCCGACCACCACGGTGCGCCTCTTTGACCGTGGCGACTTCTACACGGCTCACGGCGAGGACGCGCTGTTGGCGGCCCGCGAGGTGTTCAAGACGCAGGGAGTGATCAAGTACCTGGGGCCGGCAGGAACAAAGACTCTACAGAGTGTTGTGCTTAGCAAAATGAATTTTGAGTCTTTTGTAAAAGATCTTCTTTTGGTTCGTCAGTATCGAGTTGAAGTTTATAAGAATAAAGCTGGAAATAAGGCATCCAAGGAAAATGATTGGTATTTGGCATATAAGGCTTCACCTGGCAATCTTTCTCAGTTTGAAGACATTCTCTTTGGTAACAGTGATACGGCAGCTTCCATTGGTGTCGTGGGCATTAAAATGTCTACAGTTGATGGTCAAAGACAGCTTGGAGTTGGGTATGTTGACTCTACACAGAGGAAGCTAGGACTGTGTGAGTTCCCTGATAATGATCAGTTCTCCAATCTCGAGGCTCTCCTGATTCAGATTGGACCAAAAGAATGCGTTTTACCAGGAGGAGAGACCTTTGGAGACATGGGGAAGATGCGGCAGATTATTCAGAGAGCAGGAATTCTGATCACAGAAAGAAAAAGAGCTGACTTTTCCACAAAAGACATTTACCAGGACCTCAACCGGTTGTTGAAAGGCAAAAAAGGAGAGCAGATGAATAGTGTTGTCTTGCCAGAAATGGAAAATCAGGTTGCAGTTTCATCATTGTCTGCAGTAATCAAGTTCTTAGAACTCTTATCTGATGATTCAAATTTTGGACAGTTTGAACTGACTACTTTTGACTTCAGCCAGTACATGAAATTGGACATTGCAGCAGTTAAAGCCCTTAATCTTTTCCAGGGTTCTGTTGAAGACACCACTGGCTCTCAGTCTCTGGCTGCATTGCTGAATAAATGCAAAACCCCTCAAGGACAAAGGCTAGTTAACCAGTGGATTAAGCAGCCTCTCATGGATAAGAACAGAATAGAGGAGAGACTAAATTTAGTGGAGGCTTTTGTAGAAGATGTGGAATTGCGGCAGAATTTACAAGAGGATTTACTTCGTCGATTCCCAGATCTTAACCGACTTGCCAAGAAATTTCAGAGACAAGCTGCAAACTTACAAGATTGTTACCGACTCTACCAGGGTATAAATCAACTTCCTAATGTTATACAGGCCCTGGAAAAATATGAAGGAAGACACCAGGCATTGTTGTTGGCAGTGTTTGTGACTCCTCTTATTGATCTTCGTTCTGATTTCTCCAAGTTTCAGGAAATGATAGAAACAACGTTAGATATGGATCAGGTGGAAAATCATGAATTCCTTGTAAAACCTTCCTTTGATCCTAATCTGAGTGAATTGAGAGAAGTAATGGATGACTTGGAAAAGAAGATGCAGTCCACATTGATAAGTGCAGCTCATGACCTCGGATTGGATCCTGGCAAGCAGATTAAATTGGATTCCAGTGGACAGTTTGGCTATTACTTTCGTGTAACCTGTAAGGAAGAAAAAGTCCTTCGTAACAATAAAAACTTTAGTACTGTGGATATCCAGAAGAATGGTGTTAAATTTACCAACAGTAAGTTGTCCTCTTTGAATGAAGAATATACTAAAAATAAAGGCGAGTATGAAGAAGCCCAGGATGCCATTGTTAAAGAAATTGTCAATATATCTTCAGGCTACGTAGAACCAATGCAGTCACTGAATGATGTGTTAGCTCAGCTAGATGCTGTTGTCAGCTTTGCTCATGTGTCAAACGGAGCACCTGTTCCATATGTACGACCAGTCATTTTGGAGAAAGGTCAAGGAAGAATCATATTGAAAGCATCCAGGCATGCTTGTGTCGAAGTTCAAGATGAAATTGCATTTATTCCTAATGATGTGCACTTTGAAAAAGACAAACAGATGTTTCACATCATTACTGGCCCCAATATGGGAGGTAAATCAACATATATTCGCCAAACTGGGGTGATAGTACTTATGGCCCAAATTGGCTGTTTTGTGCCGTGCGAGTCAGCGGAAGTGTCCATTGTGGATTGCATCTTGGCTCGGGTGGGGGCTGGTGACAGTCAGTTGAAAGGAGTCTCCACATTCATGGCTGAGATGCTGGAAACTGCTTCCATCCTCAGGTCTGCAACCAAAGATTCTTTAATAATCATAGATGAACTGGGAAGAGGAACCTCTACCTATGATGGATTTGGTTTAGCATGGGCTATATCAGATTACATTGCAACAAGGATTGGTGCTTTTTGCATGTTTGCAACCCATTTTCATGAACTTACTGCACTGGCCAATCAGATACCAACTGTTAATAATCTACATGTCACAGCACTGACCACTGATGAGACCTTAACTATGCTGTATCAGGTGAAGAAAGGTGTCTGTGATCAGAGTTTTGGGATTCATGTTGCAGAGCTTGCTAATTTCCCTCGGCATGTGATAGAGTCTGCCAGACAGAAAGCCCTGGAACTTGAGGAGTTCCAGAGTATTGGTGCCTCACAACCTCGTGATGACATGGAACCAGTAGCAAAGAAGTACTGTCTGGAAAGAGAGCAAGGTGAAAAAATCATTCAGGAGTTTCTATCCAAGGTGAAGCAAGTGCCCTTTACTGAAATGTCAGAAGAAAACATCACAGAAAAGTTAAAACAGCTGAAAGCTGAGGTGATGGCAAAGAATAACAGTTTTGTGAATGAAATCATTTCACGAATAAAGGTTACTACGTGA

Related Sequences

XP_004839465.1 Protein

Msh2 PREDICTED: DNA mismatch repair protein Msh2 [Heterocephalus glaber]

Length: 934 aa      View alignments
>XP_004839465.1
MAVQPKETLQLESAAEIGFVRFFQAMPGKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYLGPAGTKTLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENDWYLAYKASPGNLSQFEDILFGNSDTAASIGVVGIKMSTVDGQRQLGVGYVDSTQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETFGDMGKMRQIIQRAGILITERKRADFSTKDIYQDLNRLLKGKKGEQMNSVVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVKALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDVELRQNLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYEGRHQALLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREVMDDLEKKMQSTLISAAHDLGLDPGKQIKLDSSGQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQSLNDVLAQLDAVVSFAHVSNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDEIAFIPNDVHFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATRIGAFCMFATHFHELTALANQIPTVNNLHVTALTTDETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIESARQKALELEEFQSIGASQPRDDMEPVAKKYCLEREQGEKIIQEFLSKVKQVPFTEMSEENITEKLKQLKAEVMAKNNSFVNEIISRIKVTT