Details from NCBI annotation

Gene Symbol Epcam
Gene Name epithelial cell adhesion molecule, transcript variant X1
Entrez Gene ID 101706078

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

EPCAM ENSCPOG00000003748 (Guinea pig)

Gene Details

epithelial cell adhesion molecule

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003385, Guinea pig)

Protein Percentage 85.16%
CDS Percentage 86.45%
Ka/Ks Ratio 0.25083 (Ka = 0.0922, Ks = 0.3675)

EPCAM ENSG00000119888 (Human)

Gene Details

epithelial cell adhesion molecule

External Links

Gene Match (Ensembl Protein ID: ENSP00000263735, Human)

Protein Percentage 80.25%
CDS Percentage 83.86%
Ka/Ks Ratio 0.28221 (Ka = 0.1215, Ks = 0.4306)

Epcam ENSMUSG00000045394 (Mouse)

Gene Details

epithelial cell adhesion molecule

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000061935, Mouse)

Protein Percentage 80.25%
CDS Percentage 80.68%
Ka/Ks Ratio 0.16808 (Ka = 0.1194, Ks = 0.7102)

Epcam ENSRNOG00000015667 (Rat)

Gene Details

epithelial cell adhesion molecule (Epcam), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021135, Rat)

Protein Percentage 78.34%
CDS Percentage 80.15%
Ka/Ks Ratio 0.15768 (Ka = 0.1245, Ks = 0.7894)

Genome Location

Sequence Coding sequence

Length: 945 bp    Location: 28755032..28770160   Strand: +
>XM_004839406.1
ATGGCGCCTTCCCAGGTCCTCGCGTTCGGGCTCCTGATCCTGGCGGCGACGGCGGCGGTGGGCACGGCCCAGGAAGGATGTGACTGTGAAAACTACAGGATGACCACAAACTGTTTTTTGAACGGAGATGGTCAATGCCAGTGTACCTCCTATGGTACACAGAATCCTGTCATTTGCACAACTCTGGCTTCCAAATGTTTGGTGATGAAGGCAGAAATGACTCACTCAAAGTCTGGGAGGAGAGTGAAGCCTGAGGGAGCGATCCAGAACAATGACGGACTGTACGATCCCGACTGTGATGAGCATGGGCTCTTCAAAGCCAAGCAGTGCAATGGCACAGCCACATGCTGGTGTGTGAATAGTGCTGGCGTCCGGAGGACCAACAAGGACACAGAGATCCAGTGCTCCGAGACCGTGCGGACCTACTGGATCATCATTGAACTAAAACACAAGGAAAGACAACAGCCTTACGACCTTCAAAGCCTACAGATGGCACTTAAGGAGATGATCACAACCCGTTACCAGCTGAATCCAAAATTTATTACAAATATTCTGTATGAGAATGATGTTATCATTATTGATCTGATGCAAAATTCTTCTCTGAAGACTCAGAATGATGTGGACATAGCTGATGTGGCTTATTATTTTGAAAAAGATGTTAAAGGTGAATCCTTGTTCCGTTCTAAGAAAATGGACCTGAGAGTAAATGGGGAACAACTGGATCTGGATCCTGGTCAAACTTTAATTTACTATGTTGATGAAAAACCACCTGAATTTTCAATGCAAGGTCTAGCAGCGGGTGTTATTGCCGTCATTGTGGTTGTGATAATAGCAATTATCGCTGGAATTGTTGTGCTGATTATTTCCAGAAAGAAGAAAACAGCAAAGTACGAGAAGGCTGAGATAAAGGAGATGGGTGAGATACATAGAGAACTCAATGCATAA

Related Sequences

XP_004839463.1 Protein

Epcam PREDICTED: epithelial cell adhesion molecule isoform X1 [Heterocephalus glaber]

Length: 314 aa      View alignments
>XP_004839463.1
MAPSQVLAFGLLILAATAAVGTAQEGCDCENYRMTTNCFLNGDGQCQCTSYGTQNPVICTTLASKCLVMKAEMTHSKSGRRVKPEGAIQNNDGLYDPDCDEHGLFKAKQCNGTATCWCVNSAGVRRTNKDTEIQCSETVRTYWIIIELKHKERQQPYDLQSLQMALKEMITTRYQLNPKFITNILYENDVIIIDLMQNSSLKTQNDVDIADVAYYFEKDVKGESLFRSKKMDLRVNGEQLDLDPGQTLIYYVDEKPPEFSMQGLAAGVIAVIVVVIIAIIAGIVVLIISRKKKTAKYEKAEIKEMGEIHRELNA