Details from NCBI annotation

Gene Symbol Socs5
Gene Name suppressor of cytokine signaling 5, transcript variant X2
Entrez Gene ID 101703084

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SOCS5 ENSCPOG00000013415 (Guinea pig)

Gene Details

suppressor of cytokine signaling 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012077, Guinea pig)

Protein Percentage 96.64%
CDS Percentage 94.53%
Ka/Ks Ratio 0.08866 (Ka = 0.0159, Ks = 0.1795)

SOCS5 ENSG00000171150 (Human)

Gene Details

suppressor of cytokine signaling 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000305133, Human)

Protein Percentage 95.9%
CDS Percentage 92.41%
Ka/Ks Ratio 0.06668 (Ka = 0.0192, Ks = 0.2883)

Socs5 ENSMUSG00000037104 (Mouse)

Gene Details

suppressor of cytokine signaling 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000038591, Mouse)

Protein Percentage 92.91%
CDS Percentage 87.5%
Ka/Ks Ratio 0.06572 (Ka = 0.0352, Ks = 0.5351)

Socs5 ENSRNOG00000028504 (Rat)

Gene Details

suppressor of cytokine signaling 5 (Socs5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020346, Rat)

Protein Percentage 93.47%
CDS Percentage 87.56%
Ka/Ks Ratio 0.05946 (Ka = 0.0325, Ks = 0.5458)

Genome Location

Sequence Coding sequence

Length: 1611 bp    Location: 28193800..28216389   Strand: +
>XM_004839400.1
ATGGATAAAGTGGGGAAAATGTGGAATACCTTCAAATACAAATGTCAGAATCTTTTCGGTCATGAGGGAGGAAGCCATAGTGAAAATGTGGACATGAACTCCAACAGGTGTTTGCCTATCAAAGAGAAAAAGATCAGTCTGGTAGACTCTGCTCCTCAGCAGCAAAGCAGTCCCTTAAGAGAAAATGTTGCCTTACAGCTGGGATTAAGTCCTTCAAAGAATTCTTCAAGGAGAAACCAAAACTGTGCTACTGAAATCCCTCAAATTGTTGAAATAAGCATCGAGAAAGATAATGATTCATGTGTCACCCCAGGAACAAGACTCACACGAAGAGATTCCTACTCTCGACATGCCCCATGGGGTGGGAAGAAAAAGCATTCCTGTTCCACAAAGACCCAGAGTTCTTTGGACACTGATAAAAAGTTTGGTAGAGCTCGAAGTGGACTGCAAAGGCGAGAGAGGCGCTATGGAGTGAGCTCAGTGCACGACATGGACAGTGTTTCCAGCAGAACCATTGGGAGCCGCTCTCTGAGACAGAGGCTACAGGACACCGTGGGCTTGTGTTTTCCCATGAGAACTTACACCAAGCAGTCAAAGCCCCTCTTTTCCAATAAAAGAAAAATACATCTTTCTGAATTGATGCTTGAGAAATGCCCTTTTCCTGCTGGCTCAGATTTAGCCCAAAAATGGCATTTGATTAAACAGCATACAGCTCCTGTGAGCCCACATTCAACCTTTTTTGATACATTTGATCCGTCCTTGGTTTCTACAGAAGATGAAGAAGACAGACTTAGAGAGAGAAGACGGCTTAGTATTGAAGAAGGGGTGGATCCCCCTCCCAATGCACAAATACATACATTTGAAGCTACTGCACAGGTTAATCCCTTATATAAACTGGGACCAAAGTTAGCTCCTGGAATGACAGAAATGAGTGGGGACAGTTCTGCAGTTCCACAGGGTACTTGTGACTCAGAAGAGGACACAACCACCCTGTGTTTGCAGTCACGGAGGCAGAAGCAGCGCCAGGTGTCTGGAGACAGCCATGCTCACATTAGCAGACAGGGAGCTTGGAAAGTCCATACACAGATTGATTATATACACTGCCTTGTGCCGGATTTACTTCAGATTACAGGGAATCCCTGTTACTGGGGAGTGATGGATCGGTATGAAGCAGAAGCCCTTCTGGAAGGGAAACCTGAAGGCACATTTTTGCTCAGGGACTCTGCACAAGAGGACTACCTCTTCTCTGTGAGCTTCCGCCGCTACAACAGATCCCTGCATGCCCGAATTGAACAGTGGAATCACAACTTCAGTTTTGATGCCCACGACCCGTGTGTGTTTCACTCTTCTACTGTAACAGGACTTCTAGAACATTATAAAGACCCCAGTTCTTGCATGTTTTTTGAACCATTGCTTACTATATCTCTGAATAGGACCTTTCCTTTTAGCCTGCAGTACATCTGCCGTGCAGTCATCTGCAGGTGCACTACGTATGATGGAATTGATGGGCTCCCTCTACCGTCAATGTTACAGGATTTTTTAAAGGAGTATCATTATAAACAAAAGGTTAGGGTTCGCTGGTTAGAACGAGAACCAGTCAAGGCAAAGTAA

Related Sequences

XP_004839457.1 Protein

Socs5 PREDICTED: suppressor of cytokine signaling 5 isoform X2 [Heterocephalus glaber]

Length: 536 aa      View alignments
>XP_004839457.1
MDKVGKMWNTFKYKCQNLFGHEGGSHSENVDMNSNRCLPIKEKKISLVDSAPQQQSSPLRENVALQLGLSPSKNSSRRNQNCATEIPQIVEISIEKDNDSCVTPGTRLTRRDSYSRHAPWGGKKKHSCSTKTQSSLDTDKKFGRARSGLQRRERRYGVSSVHDMDSVSSRTIGSRSLRQRLQDTVGLCFPMRTYTKQSKPLFSNKRKIHLSELMLEKCPFPAGSDLAQKWHLIKQHTAPVSPHSTFFDTFDPSLVSTEDEEDRLRERRRLSIEEGVDPPPNAQIHTFEATAQVNPLYKLGPKLAPGMTEMSGDSSAVPQGTCDSEEDTTTLCLQSRRQKQRQVSGDSHAHISRQGAWKVHTQIDYIHCLVPDLLQITGNPCYWGVMDRYEAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYNRSLHARIEQWNHNFSFDAHDPCVFHSSTVTGLLEHYKDPSSCMFFEPLLTISLNRTFPFSLQYICRAVICRCTTYDGIDGLPLPSMLQDFLKEYHYKQKVRVRWLEREPVKAK