Details from NCBI annotation

Gene Symbol Six3
Gene Name SIX homeobox 3
Entrez Gene ID 101698303

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SIX3 ENSCPOG00000022943 (Guinea pig)

Gene Details

SIX homeobox 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016391, Guinea pig)

Protein Percentage 97.59%
CDS Percentage 97.02%
Ka/Ks Ratio 0.06816 (Ka = 0.0109, Ks = 0.1596)

SIX3 ENSG00000138083 (Human)

Gene Details

SIX homeobox 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000260653, Human)

Protein Percentage 98.42%
CDS Percentage 97.16%
Ka/Ks Ratio 0.03236 (Ka = 0.0062, Ks = 0.1912)

Six3 ENSMUSG00000038805 (Mouse)

Gene Details

sine oculis-related homeobox 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000135677, Mouse)

Protein Percentage 99.68%
CDS Percentage 96.11%
Ka/Ks Ratio 0.0039 (Ka = 0.0012, Ks = 0.3191)

Six3 ENSRNOG00000024544 (Rat)

Gene Details

SIX homeobox 3 (Six3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000029513, Rat)

Protein Percentage 98.72%
CDS Percentage 94.78%
Ka/Ks Ratio 0.00661 (Ka = 0.0026, Ks = 0.386)

Genome Location

Sequence Coding sequence

Length: 954 bp    Location: 26387603..26390469   Strand: +
>XM_004839389.1
ATGGTATTCCGCTCCCCCCTAGACCTCTATTCCTCCCACTTCTTGTTGCCAAACTTCGCCGATTCTCACCACTGCTCCCTACTTCTGGCGAGCGGCGGCGGCGGGAGCGGCGCGGGAGGCGGCGGCGGGAACCGCGCGGGAGGCGGCGGCGGCGGCGGCGGCTCCAGGGCCCCCCCGGAAGAGTTGTCCATGTTCCAGCTGCCCACCCTCAACTTCTCGCCGGAGCAGGTGGCCAGCGTCTGTGAGACGCTGGAGGAGACGGGCGACATCGAGCGGCTGGGCCGCTTCCTCTGGTCGCTGCCCGTGGCCCCCGGGGCGTGCGAGGCCATCAACAAGCACGAGTCGATCCTGCGTGCGCGCGCCGTGGTCGCTTTCCACACGGGCAACTTCCGCGACCTGTACCACATCCTGGAGAACCACAAGTTCACCAAGGAATCGCACGGCAAGCTGCAGGCTATGTGGCTCGAGGCGCACTACCAGGAGGCCGAGAAGCTGCGCGGCCGCCCACTCGGCCCGGTGGACAAGTACCGCGTGCGCAAGAAGTTCCCGCTGCCGCGCACCATCTGGGACGGCGAGCAGAAGACGCATTGCTTCAAGGAGCGGACTCGGAGCCTGCTGCGGGAGTGGTACCTGCAGGACCCCTACCCCAACCCCAGCAAGAAACGTGAACTGGCGCAGGCCACCGGCCTCACTCCCACACAAGTAGGCAACTGGTTTAAGAACCGGCGGCAGCGCGACCGCGCCGCAGCGGCCAAGAACAGGCTCCAGCATCAGGCCATCGGACCAAGCGGCATGCGCTCGCTGGCCGAGCCCGGCTGCCCCACGCACGGCTCGGCCGAGTCGCCGTCCACGGCGGCCAGCCCGACCACCAGCGTGTCCAGCCTGACGGAGCGCGCGGACACCGGCACCTCGATCCTCTCGGTAACCTCCAGCGACTCGGAATGTGATGTATGA

Related Sequences

XP_004839446.1 Protein

Six3 PREDICTED: homeobox protein SIX3 [Heterocephalus glaber]

Length: 317 aa      View alignments
>XP_004839446.1
MVFRSPLDLYSSHFLLPNFADSHHCSLLLASGGGGSGAGGGGGNRAGGGGGGGGSRAPPEELSMFQLPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQAIGPSGMRSLAEPGCPTHGSAESPSTAASPTTSVSSLTERADTGTSILSVTSSDSECDV