Details from NCBI annotation

Gene Symbol Atl2
Gene Name atlastin GTPase 2, transcript variant X3
Entrez Gene ID 101701433

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATL2 ENSCPOG00000013597 (Guinea pig)

Gene Details

atlastin GTPase 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012242, Guinea pig)

Protein Percentage 98.29%
CDS Percentage 96.58%
Ka/Ks Ratio 0.06849 (Ka = 0.0098, Ks = 0.1425)

ATL2 ENSG00000119787 (Human)

Gene Details

atlastin GTPase 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000368237, Human)

Protein Percentage 93.26%
CDS Percentage 91.82%
Ka/Ks Ratio 0.13145 (Ka = 0.0396, Ks = 0.3016)

Atl2 ENSMUSG00000059811 (Mouse)

Gene Details

atlastin GTPase 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000064758, Mouse)

Protein Percentage 93.61%
CDS Percentage 87.85%
Ka/Ks Ratio 0.07668 (Ka = 0.0406, Ks = 0.5291)

Atl2 ENSRNOG00000006523 (Rat)

Gene Details

atlastin GTPase 2 (Atl2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008988, Rat)

Protein Percentage 92.57%
CDS Percentage 87.68%
Ka/Ks Ratio 0.08712 (Ka = 0.0453, Ks = 0.5204)

Genome Location

Sequence Coding sequence

Length: 1740 bp    Location: 19902152..19838433   Strand: -
>XM_004839315.1
ATGGCGGAGGGGGACGAGGCAGCGCGAAGGCAGCAGCCGCACCAGGGGCTGAGGCACCGGCGGCGGACCAGCGACCCCAGCGCCGGGGTGAACCACGTCTCGTCCACGACCTCCCTAGGTGAGGATTATGAAGATGATGACCTAGTAAACTCTGATGAGGTTATGAAGAAACCATGTCCAGTACAGATTGTTCTTGCTCATGAAGATGATCATAACTTTGAGCTTGATGAAGAAGCTTTGGAGCAGATTTTGCTACAGGAGCACATACGAGATCTTAACATAGTTGTGGTGTCTGTGGCAGGAGCTTTTCGTAAAGGAAAATCATTTCTACTGGACTTCATGCTTAGATATATGTATAACAAGGATTCTCAAAGTTGGATTGGTGGAAACAATGAACCATTGACTGGCTTTACATGGCGAGGTGGTTGTGAAAGAGAAACAACAGGCATACAAGTTTGGAATGAAGTATTTGTGATTGACAGACCTAATGGAACAAAAGTGGCTGTGCTGCTAATGGATACCCAGGGTGCCTTTGATAGCCAGTCAACTATCAAAGACTGTGCAACAGTTTTTGCTCTGAGCACTATGACTAGTTCGGTCCAGGTATATAATTTGTCTCAGAATATTCAAGAAGATGATCTTCAACACTTGCAATTATTTACAGAATATGGAAGACTTGCCATGGAAGAAATCTATCAGAAACCATTTCAGACGTTAATGTTTTTGATTAGAGATTGGAGTTATCCTTATGAACATTCGTATGGTTTAGAAGGTGGAAAACAATTTCTTGAAAAGCGATTGCAGGTAAAACAAAATCAACACGAAGAGCTACAGAATGTAAGGAAGCACATTCATAATTGTTTCTCAAATCTGGGTTGCTTCCTTTTGCCACATCCTGGTCTTAAAGTTGCAACTAATCCTAGTTTTGATGGGAGATTAAAAGATATTGATGAAGAATTTAAACGAGAGCTTCGAAATCTAGTTCCTTTGCTGCTTGCCCCTGAAAATTTGGTCGAAAAAGAGATAAGTGGATCTAAAGTCACTTGTAGAGATCTTGTAGAATATTTTAAGGCTTACATTAAAATTTATCAAGGAGAGGAACTTCCACATCCAAAGTCCATGCTTCAGGCAACAGCTGAAGCTAATAATCTTGCTGCAGTAGCAGGAGCACGAGATAGCTATTGCAAAAGTATGGAACAGGTATGTGGTGGGGACAAGCCTTACATTGCACCTTCAGACCTGGAGCGAAAACACCTGGATCTCAAGGAAGTGGCCATTAGACAGTTTCGTTCTGTGAAAAAAATGGGTGGAGATGAGTTCTGCCGTCGTTATCAGGACCAGCTTGAAGCTGAAATTGAAGAAACCTATGCAAATTTTATAAAGCACAATGATGGCAAAAATATCTTCTATGCTGCTCGTACCCCTGCCACGCTGTTTGCAGTTATGTTTGCAATGTATATAATCTCAGGACTGACTGGCTTCATTGGTCTAAACTCTATAGCTGTCTTGTGTAACCTTGTCATGGGGTTAGCACTGACGTCGCTTTGTACTTGGGCCTATGTTAAATACTCTGGGGAGTTCAGAGAAATTGGAACAATGATTGATCAGATTGCTGAAACACTATGGGAACAGGTGTTTTCCAAACTGTTTGAAGTTACTAGACGTCGAATGGTTCATCGTGCTCTTTCATCAGCACAGCTACAGAGACTGTCATCCAACAATAACAAGAAGAAAAATTAG

Related Sequences

XP_004839372.1 Protein

Atl2 PREDICTED: atlastin-2 isoform X3 [Heterocephalus glaber]

Length: 579 aa      View alignments
>XP_004839372.1
MAEGDEAARRQQPHQGLRHRRRTSDPSAGVNHVSSTTSLGEDYEDDDLVNSDEVMKKPCPVQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNKDSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGLEGGKQFLEKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPGLKVATNPSFDGRLKDIDEEFKRELRNLVPLLLAPENLVEKEISGSKVTCRDLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVAGARDSYCKSMEQVCGGDKPYIAPSDLERKHLDLKEVAIRQFRSVKKMGGDEFCRRYQDQLEAEIEETYANFIKHNDGKNIFYAARTPATLFAVMFAMYIISGLTGFIGLNSIAVLCNLVMGLALTSLCTWAYVKYSGEFREIGTMIDQIAETLWEQVFSKLFEVTRRRMVHRALSSAQLQRLSSNNNKKKN