Sequence details NCBI ID: XM_004839296.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gpatch11
Gene Name G patch domain containing 11
Entrez Gene ID 101723885

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GPATCH11 ENSCPOG00000012194 (Guinea pig)

Gene Details

G patch domain containing 11

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010967, Guinea pig)

Protein Percentage 89.73%
CDS Percentage 88.97%
Ka/Ks Ratio 0.20877 (Ka = 0.0732, Ks = 0.3508)

Gpatch11 ENSMUSG00000050668 (Mouse)

Gene Details

G patch domain containing 11

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000126814, Mouse)

Protein Percentage 89.73%
CDS Percentage 84.66%
Ka/Ks Ratio 0.05483 (Ka = 0.0564, Ks = 1.0294)

Gpatch11 ENSRNOG00000025317 (Rat)

Gene Details

G patch domain containing 11 (Gpatch11), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000031805, Rat)

Protein Percentage 91.12%
CDS Percentage 83.53%
Ka/Ks Ratio 0.03575 (Ka = 0.047, Ks = 1.3157)

Genome Location

Sequence Coding sequence

Length: 792 bp    Location: 18696628..18707627   Strand: +
Raw sequence   
>XM_004839296.1
ATGAAGTTGAACATGGCAGAAGAAGAGGACTATATGTCTGATTCCTTCATTAATGTCCAAGAAGATATCAGACCAGGATTGCCAATGCTGAGGCAAATCCGAGAAGCCCGTCGAAAAGAAGAAAAGCAACAGGAAGCTAATTTGAAAAATAGACAGAAGAGTTTAAAAGAAGAGGAAAGAGAAAGACGTGACACTGGGTTGAAAAATGCACTAGGCTGTGAAAACAAAGGGTTTGCTTTGCTCCAAAAGATGGGCTATAAAAGTGGTCAAGCTCTTGGCAAGAGTGGAGATGGTATTATTGAACCAATTCCTCTTAACGTCAAAACAGGGAAAAGTGGCATTGGTCATGAGGCATTATTAAAACGAAAAGCAGAAGAAAAATTAGAAAGCTACAGGAGAAAGATTCACATGAAAAACCAAGCTGAAGAAAGAGCTGCAGTACAGTTTCGGATGCGACTTAAAAACAAGCAAGATGAAATGAAGCTTGAAGGAGATCTTAAAAGAAGCCAGCGAGCCTGTCAACAATTGGATACTCAGAAGAATATTCAGGTTCCCAGAGAGGCATGGTACTGGTTGAAGCCTGAAGAAGAAACTGAAGAAGAGGAAGAAGAAGAAGAAGAGGATGAAGATGAATATAAGAGTGAAGATTTAAGTGTACTGGAAAAACTACAAATACTGACTGGTTATCTAAGGGAAGAACATCTGTATTGTATTTGGTGTGGAACAGCCTATGAAGATAAAGAAGATCTATCTTCAAATTGCCCAGGACCAACTTCTGCAGATCACGACTAA

Related Sequences

XP_004839353.1 Protein

Gpatch11 PREDICTED: G patch domain-containing protein 11 [Heterocephalus glaber]

Length: 263 aa      View alignments
>XP_004839353.1
MKLNMAEEEDYMSDSFINVQEDIRPGLPMLRQIREARRKEEKQQEANLKNRQKSLKEEERERRDTGLKNALGCENKGFALLQKMGYKSGQALGKSGDGIIEPIPLNVKTGKSGIGHEALLKRKAEEKLESYRRKIHMKNQAEERAAVQFRMRLKNKQDEMKLEGDLKRSQRACQQLDTQKNIQVPREAWYWLKPEEETEEEEEEEEEDEDEYKSEDLSVLEKLQILTGYLREEHLYCIWCGTAYEDKEDLSSNCPGPTSADHD