Sequence details NCBI ID: XM_004839292.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Strn
Gene Name striatin, calmodulin binding protein
Entrez Gene ID 101722720

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

STRN ENSCPOG00000012176 (Guinea pig)

Gene Details

striatin, calmodulin binding protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010949, Guinea pig)

Protein Percentage 97.82%
CDS Percentage 95.26%
Ka/Ks Ratio 0.06137 (Ka = 0.0103, Ks = 0.1675)

STRN ENSG00000115808 (Human)

Gene Details

striatin, calmodulin binding protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000263918, Human)

Protein Percentage 96.28%
CDS Percentage 94.06%
Ka/Ks Ratio 0.09074 (Ka = 0.0178, Ks = 0.1967)

Strn ENSMUSG00000024077 (Mouse)

Gene Details

striatin, calmodulin binding protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000120830, Mouse)

Protein Percentage 95.51%
CDS Percentage 89.06%
Ka/Ks Ratio 0.0451 (Ka = 0.0216, Ks = 0.4792)

Strn ENSRNOG00000004806 (Rat)

Gene Details

striatin, calmodulin binding protein (Strn), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006527, Rat)

Protein Percentage 96.15%
CDS Percentage 88.76%
Ka/Ks Ratio 0.03649 (Ka = 0.019, Ks = 0.5217)

Genome Location

Sequence Coding sequence

Length: 2343 bp    Location: 18584995..18476517   Strand: -
Raw sequence   
>XM_004839292.1
ATGGACGAGCAGGCGGGTCCCGGCGTCTTCTTCGGCAACAACCACCCAGGCGCCAGCGGTGCTAAGGGGCTCGGGCCTCTGCCGGAGGCTGCCGCGGCCGGCGATGGGGCGGCTACGGCGGGGGCGGCCCGAGCCCAGTACAGCCTCCCGGGGATCCTGCACTTCCTGCAGCACGAGTGGGCCCGCTTCGAGGTGGAGAGAGCCCAGTGGGAGGTGGAGCGGGCGGAGCTGCAGGCTCAGATTGCCTTCCTTCAGGGGGAAAGGAAAGGTCAAGAAAATTTGAAGAAGGATCTTGTGAGGAGGATCAAAATGTTGGAATATGCTCTTAAACAGGAAAGAGCCAAATACCACAAGTTGAAATATGGGACAGAATTGAATCAGGGAGATATGAAGCCTCCAAGCTATGATTCTGATGAAGGTAATGAAACAGAAGTCCAGCCACAACAAAACAGCCAGTTAATGTGGAAACAGGGTCGACAGCTACTCCGACAGTATCTCCAGGAGGTGGGTTACACTGATACTATTCTAGATGTGAAATCCAAACGAGTGCGTGCTTTATTGGGCTTTTCAAGTGATGTCACTGACAGGGAAGATGACAAAAATCAGGACTCAGTAATAAATGGCACAGAGGCTGAAATTAAAGAGACAGCAATGATTGGAAAATCCGAGTTAACAGATTCTGCCTCCGTGCTGGATAATTTCAAATTCCTTGAAAATGCAGCTACAGATTTCAGCGATGAAGATGAAGATGATGACATTGAGGGAAGAGAGAAAAGTGTCATTGATACTTCAACGATTGTTAGGAAAAAAGTATTGCCTGATAGCAGTGAAGATCGAGCTACAAAAGAAGCCCTGAAGGAATTTGACTTCTTGGTTACATCAGAAGAAGGAGACAATGAATCTAGAAGTACAGGTGATGGAATAGATTGGGAAAAGGAAGATCAGTGTCTCATGCCTGAAGCCTGGAATGTGGACCAGGGAGTAATTACCAAACTCAAGGAACAATACAAAAAGGAGAGAAAGGGGAAAAAGGGGGTGAAGAGGCCCAATAGGTCAAAACTACAAGATATGCTTGCTAATTTGAGAGATGTTGATGAACTTCCTTCATTGCAGCCATCTGTGGGTTCACCTTCCAGACCCAGCAGTTCCAGGCTTCCTGAACATGAAATTAATAGGGCAGATGAAGTGGAAGCCCTGACATTTCCTCCTTCTTCTGGGAAGTCATTCATCATGGGAGCAGATGAAGCCCTTGAAAGTGAACTGGGACTTGGAGAATTAGCAGGCCTCACCGTGGCCAATGAAGCGGATTCACTAGCTTACGATATAGCAAATAATAAAGATGCATTGAGGAAGACTTGGAACCCTAAGTTTACTTTGAGAAGTCACTTTGATGGCATTCGAGCCCTTGTTTTCCACCCAGTTGAGCCTGTTTTGATAACAGCATCAGAGGATCACACATTGAAAATGTGGAATTTGCAAAAAACAGCCCCAGCTAAAAAGAGTACTTCTCTTGATGTCGAGCCCATCTATACATTTAGGGCTCATAAAGGTCCAGTGCTTTGCGTGGTAATGAGCAGCAATGGTGAGCAGTGTTTCAGTGGTGGTACTGATGGACTCATCCAGGGCTGGAATACCACTAACCCCAACATTGATCCCTATGACTCTTACGATCCTTCTGTTTTAAGAGGCCCTCTGCTAGGTCACACAGATGCAGTTTGGGGTCTGGCTTACAGTGCAGCACATCAGCGTTTGTTGTCCTGCTCAGCAGATGGCACTCTTCGTTTATGGAGCACAACTGAGGTTGCTCCTGCACTAACTGTATTTAATGATAATCAAGAATTGGGAATTCCTGCCTCTGTGGACCTAGTGAGCAGTGACCCAAGCCATATGGTAGCATCATTCAGCAAAGGATACACGAGCATCTTTAATATGGAAACTCAGCAGCGCATTCTCACTTTAGAATCCAATCTAGATTCAATGTCTAGCTCCTCCTGCCAAATAAATAGAGTCATCAGTCATCCCACTCTTCCGATCAGTATCACTGCTCATGAAGATAGACACATCAAATTCTATGATAACAATACAGGCAAACTGATCCACTCAATGGTAGCCCACCTAGAAGCCGTTACAAGTTTAGCAGTTGATCCCAATGGCCTCTACTTGATGTCTGGCAGTCATGACTGTTCAATACGTTTATGGAATCTAGAAAGTAAGACATGTATCCAAGAGTTCACAGCTCATCGGAAAAAATTTGAAGAATCAATTCATGATGTAGCTTTCCACCCATCTAAATGCTATATAGCCAGTGCTGGAGCTGATGCACTTGCTAAAGTCTTTGTATGA

Related Sequences

XP_004839349.1 Protein

Strn PREDICTED: striatin [Heterocephalus glaber]

Length: 780 aa      View alignments
>XP_004839349.1
MDEQAGPGVFFGNNHPGASGAKGLGPLPEAAAAGDGAATAGAARAQYSLPGILHFLQHEWARFEVERAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKLKYGTELNQGDMKPPSYDSDEGNETEVQPQQNSQLMWKQGRQLLRQYLQEVGYTDTILDVKSKRVRALLGFSSDVTDREDDKNQDSVINGTEAEIKETAMIGKSELTDSASVLDNFKFLENAATDFSDEDEDDDIEGREKSVIDTSTIVRKKVLPDSSEDRATKEALKEFDFLVTSEEGDNESRSTGDGIDWEKEDQCLMPEAWNVDQGVITKLKEQYKKERKGKKGVKRPNRSKLQDMLANLRDVDELPSLQPSVGSPSRPSSSRLPEHEINRADEVEALTFPPSSGKSFIMGADEALESELGLGELAGLTVANEADSLAYDIANNKDALRKTWNPKFTLRSHFDGIRALVFHPVEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCFSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWSTTEVAPALTVFNDNQELGIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNLDSMSSSSCQINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVFV