Details from NCBI annotation

Gene Symbol Vit
Gene Name vitrin
Entrez Gene ID 101722372

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VIT ENSCPOG00000012173 (Guinea pig)

Gene Details

vitrin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010946, Guinea pig)

Protein Percentage 87.21%
CDS Percentage 89.18%
Ka/Ks Ratio 0.24058 (Ka = 0.0682, Ks = 0.2837)

VIT ENSG00000205221 (Human)

Gene Details

vitrin

External Links

Gene Match (Ensembl Protein ID: ENSP00000368544, Human)

Protein Percentage 86.28%
CDS Percentage 87.8%
Ka/Ks Ratio 0.22167 (Ka = 0.0757, Ks = 0.3416)

Vit ENSMUSG00000024076 (Mouse)

Gene Details

vitrin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000024880, Mouse)

Protein Percentage 81.08%
CDS Percentage 83.49%
Ka/Ks Ratio 0.21518 (Ka = 0.1096, Ks = 0.5095)

Vit ENSRNOG00000004706 (Rat)

Gene Details

Protein Vit

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006360, Rat)

Protein Percentage 81.82%
CDS Percentage 82.47%
Ka/Ks Ratio 0.17719 (Ka = 0.108, Ks = 0.6098)

Genome Location

Sequence Coding sequence

Length: 1977 bp    Location: 18358353..18448569   Strand: +
>XM_004839291.1
ATGGGGATTGCTGTTCTCACTATGAAGGCATCTGTTATTGAAATGTTCCTTGTTTTGCTGGTGACTGGAATACATTCAAATAAAGAAATGGCAAAGAAGAGTAAAAGGCCCAAGTTCACTGTGCCTCAGATCAACTGTGATGTCCAAGCTGGAAAGATAATCAATCCTGAGTTCATTGTGAAGTGTCCAGCAGGATGCCAAGACCCCAAGTACCACGTTTATGGCACCAGTGTCTATGCGTCTTACTCCAGCCTATGTGGCGCTGCAGTGCACAGTGGTGTGCTCGATAATTCAGGAGGGAAAATACTTGTTCAGAAAGTGGCTGGACAGTCTGGTTACAGAGGCAGTTACTCCAATGGTGTCCAATCGTTGTCTCTACCACGATGGAGAGAATCCTTCATTGTCTCAGAAAGCAAACCCAAAAAGGGTGTAACCTACCCATCGGCTCTTATATATTCATCATCCAAGACTCCAGCTGCCAAAGCAGGCAAGTATGAGACCACCAAAGCCTATCAAAAGCCATCTGTTCCAGAGACAACTGCACAGCCAGTGGCTCTGATGCAGGTCTTGGCTAACCTGGAAACTGAGGCCACTCACATCACCTTGCCAAAGCCATCTCTACTGGTAGCCTCTGACACCAGCAGCCCCAGGCCACAGCCCATGGGCCACAGGAGCTGGGAGATGGATTCCCGGTCCACCGCCGCCTACATTGGCAGCCAAAACAGTCCCAGTGCCGGTCCAGGATTTGTTCCAAAAGAAGAATTAAGCACACAGGCTTTGGAGCCAGTGTCCCTGGGAGATCCGAACTGCAAAGTTGACTTGTCATTTTTAATTGATGGGAGCTCCAGCATCGGCAAGCGTCGGTTCCGAATCCAGAAGCAGTTCCTGGCTGATGTCGCCCAGGCCGTTGACATCGGCCCCTCCGGTCCTCTGATGGGCGTTGTTCAGTATGGAGACAACCCTGCTACCCACTTTAACCTAAAAACTCACACAAATTCTCGAGATCTGAAGGCAGCCATAGAGAAAATTACCCTGAGAGGAGGACTTTCTAATGCAGGCCGAGCCATCTCTTTTGTGACCAAGAACTTCTTTTCCAAAGCCAATGGAAACAGAGGTGGTGCTCCCAACGTGGCTGTGGTGCTACTGGATGGCTGGCCCACAGACAAAGTAGAGGAGACTTCAAGACTTGCAAGAGAGTCAGGAATCAACATTTTCTTCATCACCATTGAAGCTGCTCTTGAAAATGAGAAGCAGTACGTGGTGGAGCCCAACTTCGCCAGCAAGGCTGTGTGCAGAACAAATGGCTATTACTCGTTCAGTGTGCAGAGCTGGTTTGGACTCCGCAAGACCGTGCAGCCCCTGGTGAAGCGGATCTGCGACACAGACCGCCTGGCCTGCAGCAAGACCTGCTTCAACTCAGCCGACATTGGCTTCATCATTGATGGCTCCAGTAGCGTGGGGACAGGCAACTTCCGCACAGTCCTGCAGTTCGTGGCCAACCTCAGCAAGGAGTTTGAGATCTCAGACACGGACACGCGCATCGGGGCAGTACAGTACACCTACGAGCAGCGGTTGGAGTTTGGGTTTGACAAGTACCACACCAAGGCTGACATCCTCAACGCCATCAAGAGTGTGGGGTACTGGAGTGGGGGCACCAGCACGGGGGCTGCCATCCACTATGCCCTGGAGCAGCTCTTCAAGAAGTCCAAGCCCAACAAGCGGAAGTTAATGATCCTGATCACAGATGGCAAGTCCTACGATGACGTGCGGATCCCAGCCATGGCTGCCCATCAGAGGGGCGTCATCACTTACGCCATAGGCGTTGCATGGGCTGCCCAGGAAGAGCTGGACATCATTGCCACTCACCCTGCCAGGGACCACTCCTTCTTTGTGGATGAGTTTGACAACCTCTACACATCTGTTCCCAAGATCATCCGGAACATCTGTACCGAGTTCAACTCACAGCCTCGGAACTGA

Related Sequences

XP_004839348.1 Protein

Vit PREDICTED: vitrin [Heterocephalus glaber]

Length: 658 aa      View alignments
>XP_004839348.1
MGIAVLTMKASVIEMFLVLLVTGIHSNKEMAKKSKRPKFTVPQINCDVQAGKIINPEFIVKCPAGCQDPKYHVYGTSVYASYSSLCGAAVHSGVLDNSGGKILVQKVAGQSGYRGSYSNGVQSLSLPRWRESFIVSESKPKKGVTYPSALIYSSSKTPAAKAGKYETTKAYQKPSVPETTAQPVALMQVLANLETEATHITLPKPSLLVASDTSSPRPQPMGHRSWEMDSRSTAAYIGSQNSPSAGPGFVPKEELSTQALEPVSLGDPNCKVDLSFLIDGSSSIGKRRFRIQKQFLADVAQAVDIGPSGPLMGVVQYGDNPATHFNLKTHTNSRDLKAAIEKITLRGGLSNAGRAISFVTKNFFSKANGNRGGAPNVAVVLLDGWPTDKVEETSRLARESGINIFFITIEAALENEKQYVVEPNFASKAVCRTNGYYSFSVQSWFGLRKTVQPLVKRICDTDRLACSKTCFNSADIGFIIDGSSSVGTGNFRTVLQFVANLSKEFEISDTDTRIGAVQYTYEQRLEFGFDKYHTKADILNAIKSVGYWSGGTSTGAAIHYALEQLFKKSKPNKRKLMILITDGKSYDDVRIPAMAAHQRGVITYAIGVAWAAQEELDIIATHPARDHSFFVDEFDNLYTSVPKIIRNICTEFNSQPRN