Details from NCBI annotation

Gene Symbol Ltbp1
Gene Name latent transforming growth factor beta binding protein 1, transcript variant X1
Entrez Gene ID 101715513

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LTBP1 ENSCPOG00000007011 (Guinea pig)

Gene Details

latent transforming growth factor beta binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006323, Guinea pig)

Protein Percentage 94.92%
CDS Percentage 92.95%
Ka/Ks Ratio 0.10771 (Ka = 0.025, Ks = 0.2317)

LTBP1 ENSG00000049323 (Human)

Gene Details

latent transforming growth factor beta binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000386043, Human)

Protein Percentage 92.84%
CDS Percentage 90.36%
Ka/Ks Ratio 0.10359 (Ka = 0.0356, Ks = 0.3433)

Ltbp1 ENSMUSG00000001870 (Mouse)

Gene Details

latent transforming growth factor beta binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000001927, Mouse)

Protein Percentage 89.07%
CDS Percentage 86.65%
Ka/Ks Ratio 0.10102 (Ka = 0.0537, Ks = 0.5312)

Ltbp1 ENSRNOG00000033090 (Rat)

Gene Details

latent transforming growth factor beta binding protein 1 (Ltbp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000040099, Rat)

Protein Percentage 89.89%
CDS Percentage 86.91%
Ka/Ks Ratio 0.09599 (Ka = 0.0502, Ks = 0.5235)

Genome Location

Sequence Coding sequence

Length: 5118 bp    Location: 14602805..15035094   Strand: +
>XM_004839274.1
ATGGCGGGGCCCTGGCTCAGGTGGGGGCTGCTGCTGTGCGCCGGGCTGCTGGCGTGCTGCGCGCGCGGCCGGTTGCGGAGGATCACGTACGTGGTGCGCCCGGGCCCCGGCCTGGCGGCAGTCGCCTCTCCCCTGGCCGGGCCGCCGCGCCCGCGGACCTTCAACGTCGCGCTCAACGCCAGGTACAGCCGCGGCTCGGCGGGCGCCCCCTCGGAGCGGAGCCGGCGCACGAGCAAGCCGGGAGGCGCGGCCCTGCAGGGGCTCCGGCCGCCGTCGCCCCCCGAGCCCGCGCGTCCCGGGGCCCCCGGCGGGCAGCTGCTGCCCAAGGCCGTCGGCCACCCGGCGGCCGCCCCGTTCGCCAGGCAGGGCCGGCAAGCTGCGCGCTCCAAGGTGCCGCAGGAGACGCAGAGCGGCGCGGGCTCCCGGCCGCAGGTTCACCCGAAGCAGCAGCTGCAGGGGGTTAATATCTGCGGAGGGCAGTGCTGTCATGGCTGGAGCAAGGCCCCTGGCTCCCAAAGGTGCACCAAACCAAGCTGTGTTCCACCGTGCCAGAATGGAGGGATGTGTCTCCGACCTCAACTCTGTGTGTGCAAACCAGGGACCAAGGGCAAAGCCTGTGAGACAACAGCTCCCCAGAACACCTTGTCAACGGCCTTTGGAGGGCAGAGTCCTGGGGCTGCCCCTTCTTGGGGCCCTCCTGAGCAAGCAGCAAAGCACACTTCGTCTAAGAAGGCAGACACCCTACCAAGAGTCAGTCCTGTGGCCCAGATGACCTTGACCCTCAAGCCAAAGCCTTCAGTAGGACTCTCCCAGCAGATACATTCTCAAGTAACACCCTTCTCCTCCCAGAATGTGATGATTCACCATGGCCAGGCCCAGGAATATGTGCTCAAGCCCAAATATTTTCCATCCCAGAAGGTGATTTCTGGGGAGCAGTCGACGGAAGGCTCATTCCCATTAAGATATGGGCAGGACCAAGTGCCTTTTCAGTTGAGTAACCACACTGGCCGCATCAAGGTGGTCTTTACTCCGAGCATCTGTAAAGTGACCTGCACCAAGGGCAGCTGTCAGAACAGCTGCAAGAAGGGGAACACCACCACTCTCATTAGTGAGAATGGTCATGCTGCTGACACCCTGACAGCTACGAACTTCCGAGTGGTAATTTGCCATCTTCCATGTATGAATGGTGGCCAGTGCAGTTCAAGGGACAAATGTCAGTGCCCTCCAAATTTCACAGGAAAGCTCTGTCAGATCCCGGTCCATGGAGCCAGCATGCCTAAACTTTATCAGCATTCCCAGCAGCCAGGCAAGGCATTGGGGACACATGTCATCCATTCTACACACACTTTGCCCCTGACCATGACCAGTCAGCAAGGAGTCAAAGTGAAATTTCCTCCCAACATAGTCAATATCCATGTGAAACATCCTCCTGAGGCTTCTGTCCAGATTCATCAGGTTTCAAGAATCGATGGCCCAACAGGCCAGAAAGTAAAAGAAGCTCTGCCAGGCCAAACCCAAGTTTCATACCAAGGGCTTCCTGTCCAGAAGACCCAGACTGTACATTCCACACACTCCCATCAGCAGGTCATTCCACACGTCTATCCCGTGGCTGCTAAAAGGCAACTTGGCCGGTGCTTCCAGGAAACCATTGGGTCCCAGTGTGGCAAAGCTCTCCCTGGCCTTTCAAAGCAAGAGGACTGCTGTGGAACTGTGGGTACCTCCTGGGGCTTTAACAAGTGCCAGAAATGCCCCAAGAAGCCAGCTTATCATGGATATAATCAAATGATAGAATGCCTGCAAGGTTATAAGAGGGTTAACAACACCTTTTGTCAAGATATTAATGAATGCCAGCTACAAGGTGTGTGCCCTAATGGTGAGTGTTTGAATACCATGGGCAGCTATAGATGTACCTGCAAAATGGGATTCGGGCCGGACCCTACCTTTTCAAGTTGTGTTCCGGAGCCCCCTGTGATGGCAGAAGAGAAGGGGCCCTGTTACCGGCTTGTCAGTTCCGGCAGGCAGTGTCTGCACCCTCTGTCTGTACACCTCACCAAGCAGCTCTGCTGCTGTAGTGTGGGCAAGGCCTGGGGTCCGCATTGTGAGAAATGTCCTCTCCCAGGCACAGCTGCTTTTAAGGAAATCTGTCCTGGTGGAATGGGTTATACGGTTTCTGGCGTTCATAGACGCAGGCCAATCCATCACCATGTAGGTAAAGGACCTGTATTTGTCAAGCCAAAGAACACTCAACCTGTTGCTAAAAGTACTCATCCTCCACCTCTCCCAGCCAAGGAAGAGCCAGTGGAGGCCCTGACCTTCTCCCGGGAACATGGGCCAGGAGCAGCGGAGTCGGAAGTGGCAACTGCACCCCCTGAGAAGGAAATATCTTCATTAGATCAAGAGAAAACCAAACTTGAGCCTGGCCAACCTCAGCTCTCCCCAGGCATTTCAACTTTTCATTTGCATCCCCAGTTTCCAGTAGTGATTGAAAAAACATCTCCTCCTGTACCTGTGGAAGTAGCTCCTGAAGCTTCCACATCGAGTGCCAGCCAAGTAATTGCACCGACTCAAGTAACAGAAATCAATGAATGTACGGTGAATCCTGATATCTGTGGAGCAGGACACTGCATTAACCTGCCAGTGAGGTACACGTGTATATGCTACGAGGGCTACAAGTTCAGCGAGCAGCAGAGGAAATGTGTTGATATTGATGAATGTACTCAGGCCCAACACCTCTGCTCCCAGGGACGCTGTGAAAACACGGAAGGAAGTTTCCTGTGTATTTGCCCAGCAGGCTTTATGGCCAGTGAGAAGGGCACTAACTGCATAGATGTGGACGAGTGCCTGCGGCCAGATGTGTGTGGCCAAGGGCACTGTGTCAACACCGTGGGCGCCTTCCGCTGTGAGTTCTGCGACAGTGGGTACCGCATGACCCGGAGAGGCCGTTGTGAGGATATTGATGAATGTTTGACTCCAAGTACTTGTCCAGATGAGCAGTGTGTGAATTCTCCTGGATCTTACCAGTGCGTCCCCTGCACAGAAGGGTTCCGAGGCTGGAATGGACAGTGTCTCGACGTGGACGAGTGCCTGGAACCAAATGTCTGCACAAATGGTTCTTGTTCCAACCTTGAAGGTTCCTTCATGTGCTCCTGTCACAAGGGTTACAGCCCCACGCCAGACCACAGACACTGTCAAGATATTGATGAATGTCAGCAAGGGAATCTATGTATGAATGGACAGTGCAAGAACACAGAGGGCTCCTTCCGGTGTACCTGTGGCCAGGGGTACCAGCTGTCAGCAGCAAAAGACCTGTGTGGAGATATTGATGAATGCCAGCACCGCCACCTCTGTGCTCACGGCCAGTGCAGGAACACAGAGGGCTCCTTCCAGTGTTTGTGTGACCAGGGCTACAGAGCATCTGCATTTGGAGATCACTGTGAAGATATCAATGAATGCTTGGAGGACAACAGTGTGTGCCAGGGGGGAGACTGCATTAATACTGATGGGTCGTATGATTGTACTTGTCCAGACGGATTCCAACTAAACGACAATAAAGGATGTCAAGATATTAATGAGTGTGAGCAGCCAGGGCTCTGTGGTCCTCATGGGGAGTGTCTCAACACAGATGGTTCTTTCCACTGTATCTGCGAACAAGGTTTCTCCATCTCTGCAGATGGCCGCACATGTGACGATATTGATGAATGTGTAAACAACACTGTATGTGACAGTCACGGGTTTTGTGACAATACAGCTGGCTCCTTCCGCTGCCTCTGTTATCAGGGCTTTCAAGCCCCGCAGGATGGGCAAGGGTGTGTGGATGTGAACGAATGTGAACTGCTCAGTGGCGTGTGTGGGGAAGCCTTCTGTGAAAACGTGGAGGGGTCCTTCCTGTGTGTGTGTGCTGACGAAAGCCAGGAGTACAGCCCCATGACGGGCCAGTGTCGCTCCCGGGCCTCTAGAGTTTTAGGTGTAGATCAGCCCAGAGAAGAAAAGAAAGAATGCTACTATAATCTCGACGATGCCAGTCTCTGTGATAATGTGTTGGCCCCCAATGTCACCAAGCAAGAATGCTGCTGCACGTCCGGTGCTGGGTGGGGAGATAACTGCGAGATTTTCCCTTGCCCCGTGCTGGGGACTGCTGAGTTCACGGAAATGTGTCCTAGAGGAAAAGGTTTTGTCCCCACTGGAGAATCCTCTTACAACATTGGTGGCAACATCTATAAAGATGCTGATGAATGCCTACTTTTTGGACAAGAAATCTGCAAAAATGGTTTCTGTTTGAACACCCAGCCTGGTTATGAATGCTACTGTAAGCAAGGGACATATTATGATCCTGTCAAATTGCAGTGTTTTGATATGGATGAATGTCAAGATCCCAGCAGTTGTATTGATGGCCAGTGTGTTAATACAGAAGGCTCTTACAACTGCTTCTGTACCCACCCGATGGTCCTGGATGCTTCAGAAAAAAGATGCATACGTCCCACTGAGTCAAATGAACAAATAGAAGAAACCGATGTGTACCAAGATCTGTGCTGGGAACATCTGAGTGATGAGTATGTGTGCAGCCGTCCTCTTGTGGGCAAGCAGACAACATACACCGAGTGCTGCTGTTTGTACGGAGAGGCCTGGGGCATGCAGTGTGCCCTCTGCCCCATGAAGGACTCAGATGACTACGCCCAGCTGTGTAACATCCCTGTGACAGGGCGCCGGCGGCCATATGGACGCGATGCCCTGGTTGACTTCAGTGAGCAGTACTCTCCAGAATCAGACCCCTACTTCATCCAGGACCGGTTTTTAAATAGCTTTGAGGAGTTACAAGCAGAGGAGTGCGGCATCCTCAATGGCTGTGAGAACGGCCGGTGTGTGAGGGTTCAGGAAGGTTATACCTGTGACTGCTTTGATGGGTACCACCTGGACACGGCCAGGATGACCTGTGTGGATGTAAATGAATGCGATGAGCTGAACAACCGGATGTCGCTCTGCAAGAATGCCAAGTGCATTAACACCGAAGGTTCCTACAAATGTTTGTGTCTGCCAGGCTACGTACCTTCTGACAAGCCCAACTATTGCACTCCGCTGAATACTGCCTTGAATTTAGAAAAAGACGGCGACCTGGAGTAA

Related Sequences

XP_004839331.1 Protein

Ltbp1 PREDICTED: latent-transforming growth factor beta-binding protein 1 isoform X1 [Heterocephalus glaber]

Length: 1705 aa      View alignments
>XP_004839331.1
MAGPWLRWGLLLCAGLLACCARGRLRRITYVVRPGPGLAAVASPLAGPPRPRTFNVALNARYSRGSAGAPSERSRRTSKPGGAALQGLRPPSPPEPARPGAPGGQLLPKAVGHPAAAPFARQGRQAARSKVPQETQSGAGSRPQVHPKQQLQGVNICGGQCCHGWSKAPGSQRCTKPSCVPPCQNGGMCLRPQLCVCKPGTKGKACETTAPQNTLSTAFGGQSPGAAPSWGPPEQAAKHTSSKKADTLPRVSPVAQMTLTLKPKPSVGLSQQIHSQVTPFSSQNVMIHHGQAQEYVLKPKYFPSQKVISGEQSTEGSFPLRYGQDQVPFQLSNHTGRIKVVFTPSICKVTCTKGSCQNSCKKGNTTTLISENGHAADTLTATNFRVVICHLPCMNGGQCSSRDKCQCPPNFTGKLCQIPVHGASMPKLYQHSQQPGKALGTHVIHSTHTLPLTMTSQQGVKVKFPPNIVNIHVKHPPEASVQIHQVSRIDGPTGQKVKEALPGQTQVSYQGLPVQKTQTVHSTHSHQQVIPHVYPVAAKRQLGRCFQETIGSQCGKALPGLSKQEDCCGTVGTSWGFNKCQKCPKKPAYHGYNQMIECLQGYKRVNNTFCQDINECQLQGVCPNGECLNTMGSYRCTCKMGFGPDPTFSSCVPEPPVMAEEKGPCYRLVSSGRQCLHPLSVHLTKQLCCCSVGKAWGPHCEKCPLPGTAAFKEICPGGMGYTVSGVHRRRPIHHHVGKGPVFVKPKNTQPVAKSTHPPPLPAKEEPVEALTFSREHGPGAAESEVATAPPEKEISSLDQEKTKLEPGQPQLSPGISTFHLHPQFPVVIEKTSPPVPVEVAPEASTSSASQVIAPTQVTEINECTVNPDICGAGHCINLPVRYTCICYEGYKFSEQQRKCVDIDECTQAQHLCSQGRCENTEGSFLCICPAGFMASEKGTNCIDVDECLRPDVCGQGHCVNTVGAFRCEFCDSGYRMTRRGRCEDIDECLTPSTCPDEQCVNSPGSYQCVPCTEGFRGWNGQCLDVDECLEPNVCTNGSCSNLEGSFMCSCHKGYSPTPDHRHCQDIDECQQGNLCMNGQCKNTEGSFRCTCGQGYQLSAAKDLCGDIDECQHRHLCAHGQCRNTEGSFQCLCDQGYRASAFGDHCEDINECLEDNSVCQGGDCINTDGSYDCTCPDGFQLNDNKGCQDINECEQPGLCGPHGECLNTDGSFHCICEQGFSISADGRTCDDIDECVNNTVCDSHGFCDNTAGSFRCLCYQGFQAPQDGQGCVDVNECELLSGVCGEAFCENVEGSFLCVCADESQEYSPMTGQCRSRASRVLGVDQPREEKKECYYNLDDASLCDNVLAPNVTKQECCCTSGAGWGDNCEIFPCPVLGTAEFTEMCPRGKGFVPTGESSYNIGGNIYKDADECLLFGQEICKNGFCLNTQPGYECYCKQGTYYDPVKLQCFDMDECQDPSSCIDGQCVNTEGSYNCFCTHPMVLDASEKRCIRPTESNEQIEETDVYQDLCWEHLSDEYVCSRPLVGKQTTYTECCCLYGEAWGMQCALCPMKDSDDYAQLCNIPVTGRRRPYGRDALVDFSEQYSPESDPYFIQDRFLNSFEELQAEECGILNGCENGRCVRVQEGYTCDCFDGYHLDTARMTCVDVNECDELNNRMSLCKNAKCINTEGSYKCLCLPGYVPSDKPNYCTPLNTALNLEKDGDLE