Sequence details NCBI ID: XM_004839273.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ttc27
Gene Name tetratricopeptide repeat domain 27, transcript variant X1
Entrez Gene ID 101714933

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TTC27 ENSCPOG00000000166 (Guinea pig)

Gene Details

tetratricopeptide repeat domain 27

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000146, Guinea pig)

Protein Percentage 91.97%
CDS Percentage 92.64%
Ka/Ks Ratio 0.24965 (Ka = 0.0442, Ks = 0.1769)

TTC27 ENSG00000018699 (Human)

Gene Details

tetratricopeptide repeat domain 27

External Links

Gene Match (Ensembl Protein ID: ENSP00000313953, Human)

Protein Percentage 89.09%
CDS Percentage 88.93%
Ka/Ks Ratio 0.1867 (Ka = 0.0588, Ks = 0.3151)

Ttc27 ENSMUSG00000024078 (Mouse)

Gene Details

tetratricopeptide repeat domain 27

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000024882, Mouse)

Protein Percentage 85.83%
CDS Percentage 84.93%
Ka/Ks Ratio 0.18288 (Ka = 0.0856, Ks = 0.4682)

Ttc27 ENSRNOG00000042932 (Rat)

Gene Details

tetratricopeptide repeat domain 27 (Ttc27), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006505, Rat)

Protein Percentage 86.89%
CDS Percentage 84.89%
Ka/Ks Ratio 0.16691 (Ka = 0.0809, Ks = 0.4847)

Genome Location

Sequence Coding sequence

Length: 2544 bp    Location: 14256381..14449484   Strand: +
Raw sequence   
>XM_004839273.1
ATGTGCGGGGTGATGTGGACCCCGGAGGTGGCAGTTCTGAGGGGCTTCTCTACTGAGGCTGAGCGGCAGCAGTGGAAGCAGGAGGGAGCGTCTGGCTCAGAGAGTGGATCCTTCTTACAGTTGCTGTTAGAAGGGCGTTATGAGGCTGTGTTCTTCCATTCAGTGACTCAAAATATTTTAAATTTTTCAACAATGGCTGAAGAAAAAATTGACAGCTACCTGGAGAAGCAGATAGTAACATTCCTGGATTGCTCTGCAGATTTGGACAAAACAGAAAGACAGCAGCTGATATTCCTGCTTGGTGTGAGCAGTTTGCAGCTTTTTGTTCAGAGTAACTGGACGGGGCCTCTTGTGGACTTGCACCCTCGAGATTTTTTGCCATCTGTTCTGTTCCAGCAATTTAGTAAGGTCAAAGAACTAGACATGGTTGTTCTGAGCCTGCTCACTCTAGACGGTGAATCAGTCTACAGTCTGACTGCAAAACCTATCCTGCTACTGATTGCACGCATTATCCTGGTGAATATAAGACATAAACTGACAGCTATTCAGAGCTTGCCATGGTGGACTTTGAGATGTGTGAATATTCACCAGCAGTTGCTAGAGGAGCGCTCACTTCAGCTTTTTGCTCTTGTTGAGAACTGTATTGATCAAGTGTTGAAACTAGAGAATCTGTTTGCAGATGATTCGGGTCGATATTTGGTGATTCAATTCCATCTGGAATGTGCATATATATATTTATATTATTATGAATATAAAAAAGCGAAAGAGCAGTTCAATATTGCTAAAGACATTGGCAAATTGCATATTGACTTGACAGGTGTATTAGGAAAAAGAACACGATTCCAGGAAAATTATGTAGCACAACTGATTGTGGATGTAAGAAGGGAAGGGGATGGCCTTTCAAACTCTGAATTCAGTCCAGCACCCACCCCTCAGGAACGTTTAACCAAGAATCTTGAGCTCAATGATGATACTGTTCTGAATGAGATAAAATTCGCAGACTGTGAACAGTTTCAGATGCCTGACCTTTGTGCTGAAGAGCTTGCTGTTATCCTTGGAGTCTGCACAAATTTTCAAAAGAATAACCCAGTACATAAGTTAACTGAAGAGGAGCTGCTGGCATTTACATCATGTTTGCTTTCACAACCAAAGTTCTGGGCCATTCAGACATCAGCCTTGATCCTCCGGACAAAACTTGAGCGAGGAAGCACCCGCCGAGTGGAACGGGCAATGAGGCAGACACAGGCTCTTGCAGACCAATTTGAGGATAAAACTACGTCTGTGTTGGAACGTCTGAAGATTTTCTACTGCTGTCAAGTACCACCTCACTGGGCTATCCAGCGCCAACTTGCAAGTTTGCTGTTTGAGTTGGGGTGTACCAGTTCGGCCCTTCAGATATTTGAGAAGCTGGAAATGTGGGAAGATGTGGTCATTTGTTACGAAAGGGCTGGGCAGCATGGGAAGGCAGAAGAAATCCTTAGGCAAGAGCTGGAGAAAAAAGAAACACCAAGTTTATACTGCTTGCTTGGAGATGTCCTTCGAGATCACTCCTGCTATGACAAGGCCTGGGAGCTGTCCCAGCACCGCAGTGCTCGGGCCCAGCGCTCCAAAGCCCTCCTTCATCTTCGGAACAAGGAGTTTAAAGAATGTGTGGAGTGCTTTGAACGCTCTGTGAAGATTAATCCTATGCAGCTTGGAGTGTGGTTTTCTCTAGGCTGTGCCTATTTGGCCTTGGAAGATTATGGAGGCTCAGCAAAGGCATTTCAGCGTTGTGTGACCCTAGAACCTGATAATGCTGAAGCTTGGAACAATTTATCAACTTCCTATATCCGATTAAAACAAAAAGTAAAAGCTTTTAGAACTTTACAAGAAGCTCTCAAATGTAACTATGAACACTGGCAAATCTGGGAAAACTATATCCTCACCAGCACTGATGTTGGGGAATTTTCAGAAGCAATTAAAGCTTATCACCGACTCTTGGACTTAAGAGACAAGTACAAAGATGTTCAGGTCCTTAAAATTCTGGTCAGGGCAGTGACTGATGGGATGACTGATCGAAGTGGAGATGTTGCCACAAGCCTCAAAGGAAAGCTGCAGGAGTTATTTGGCAGAGTAACTTCAAGAGTGACCAATGATGGTGAAGTCTGGAGGCTGTATGCCCAATTGTGTGGGAATGGACAGAGTGAGAAGCCCGATGAGAACAAGAAGGCATTCCAGTATCTCTTGAAGGCATACAAGTGTGACACCCAGTCCCGTTGTTGGGAGAAAGATATTGCATCATTTAAGGAAATCGTTCAAAGAGCCTTAGGGCTTGCACATGTGGCTATAAAATGCAGTGAAAACAAACCTGGTCCTCAAGAAGCTGTACAGATGCTTTCTTCAGTTCGACTTAATTTACAGGGCTTACTATCTAAGGCAAAGCAACATTTTACAGACGTGACAAGTGGAGAAGTTTCCAGTGAGTTAGCAGATGAAATAGCAGCTATGGATGCCTTGGTAACAGAACTTCAAGACCTAAGCAACCAGTTTCGAAATCAGTATTAA

Related Sequences

XP_004839330.1 Protein

Ttc27 PREDICTED: tetratricopeptide repeat protein 27 isoform X1 [Heterocephalus glaber]

Length: 847 aa      View alignments
>XP_004839330.1
MCGVMWTPEVAVLRGFSTEAERQQWKQEGASGSESGSFLQLLLEGRYEAVFFHSVTQNILNFSTMAEEKIDSYLEKQIVTFLDCSADLDKTERQQLIFLLGVSSLQLFVQSNWTGPLVDLHPRDFLPSVLFQQFSKVKELDMVVLSLLTLDGESVYSLTAKPILLLIARIILVNIRHKLTAIQSLPWWTLRCVNIHQQLLEERSLQLFALVENCIDQVLKLENLFADDSGRYLVIQFHLECAYIYLYYYEYKKAKEQFNIAKDIGKLHIDLTGVLGKRTRFQENYVAQLIVDVRREGDGLSNSEFSPAPTPQERLTKNLELNDDTVLNEIKFADCEQFQMPDLCAEELAVILGVCTNFQKNNPVHKLTEEELLAFTSCLLSQPKFWAIQTSALILRTKLERGSTRRVERAMRQTQALADQFEDKTTSVLERLKIFYCCQVPPHWAIQRQLASLLFELGCTSSALQIFEKLEMWEDVVICYERAGQHGKAEEILRQELEKKETPSLYCLLGDVLRDHSCYDKAWELSQHRSARAQRSKALLHLRNKEFKECVECFERSVKINPMQLGVWFSLGCAYLALEDYGGSAKAFQRCVTLEPDNAEAWNNLSTSYIRLKQKVKAFRTLQEALKCNYEHWQIWENYILTSTDVGEFSEAIKAYHRLLDLRDKYKDVQVLKILVRAVTDGMTDRSGDVATSLKGKLQELFGRVTSRVTNDGEVWRLYAQLCGNGQSEKPDENKKAFQYLLKAYKCDTQSRCWEKDIASFKEIVQRALGLAHVAIKCSENKPGPQEAVQMLSSVRLNLQGLLSKAKQHFTDVTSGEVSSELADEIAAMDALVTELQDLSNQFRNQY