Details from NCBI annotation

Gene Symbol Spast
Gene Name spastin, transcript variant X3
Entrez Gene ID 101710272

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SPAST ENSCPOG00000008815 (Guinea pig)

Gene Details

spastin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007913, Guinea pig)

Protein Percentage 97.79%
CDS Percentage 96.25%
Ka/Ks Ratio 0.08212 (Ka = 0.0103, Ks = 0.1256)

SPAST ENSG00000021574 (Human)

Gene Details

spastin

External Links

Gene Match (Ensembl Protein ID: ENSP00000320885, Human)

Protein Percentage 94.86%
CDS Percentage 93.44%
Ka/Ks Ratio 0.13351 (Ka = 0.0263, Ks = 0.197)

Spast ENSMUSG00000024068 (Mouse)

Gene Details

spastin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000024869, Mouse)

Protein Percentage 92.44%
CDS Percentage 88.03%
Ka/Ks Ratio 0.09621 (Ka = 0.0417, Ks = 0.4335)

Spast ENSRNOG00000027136 (Rat)

Gene Details

spastin (Spast), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000033763, Rat)

Protein Percentage 95.23%
CDS Percentage 89.69%
Ka/Ks Ratio 0.05542 (Ka = 0.024, Ks = 0.4336)

Genome Location

Sequence Coding sequence

Length: 1755 bp    Location: 13721111..13780530   Strand: +
>XM_004839264.1
ATGAGTTCTCCGGGTGGACGAGGGAAGAAGAAAGGCTCCGGCGGCCCCAGCAGCCCGGTGCCTCGCAGGCCTCCGCCCCCCTGCCCGGCCCCCGCCCCTCCCGTCGCCGGGCCGGCCCCTCCGCCGCCCTCGGCCCCTAAGCGGAACCTGTATTACTTCTCCTACCCCCTGTTCGCAGGCTTCGCGCTGCTGCGCCTGGCGGCCTTCCACCTGGGGCTCCTCTTCGTGTGGCTCTGTCAGCGCTTGTCCCGCGCCCTCATGGCCGCCAAGAGGAGCTCCCGGGCTGCGCCGGCGCCGGCCTCGGCCTCGCCTCCGGCCCCGGAGCCGGGCGGGGAGGCCGAGCGCGTCCGAGCCTTCCACAAACAGGCCTTCGAGTACATCTCCGTTGCCCTGCGCATCGACGAGGACGAGAAAGCAGGACAGAAGGAGCAAGCTGTGGAATGGTATAAGAAAGGTATCGAAGAACTAGAAAAAGGAATAGCTGTCATAGTTACAGGACAAGGTGAACAATGTGAAAGAGCTAGACGTCTTCAAGCAAAAATGATGACTAATTTGGTTATGGCCAAGGATCGTTTACAACTTCTAGAAAGTGGAGCTGTTCCAAAAAGAAAAGATCCCTTAACACACGCTAGTAATTCACTGCCTCGCTCAAAAACAGTTATGAAAACTGGATCCACAGGTCTTTCAGGTCACCACAGAGCACCTAGTTGCAGTGGTTTATCCATGGTTTCTGGAACGAGACAGGGGCCTGGTCCTACAACAGCGGCTCATAAGGGCACTCCAAAAATAAACAGAACAAATAAGCCTTCAACCCCTACAACTGCTGCTCGAAAAAAGAAAGACTTGAAGAATTTTAGGAATGTGGATAGCAACCTTGCTAACCTTATAATGAATGAAATTGTGGACAATGGGACAGCTGTTAAATTTGATGATATAGCTGGTCAAGAGTTGGCAAAACAAGCATTGCAAGAAATTGTTATTCTTCCTTCTCTCAGGCCTGAGTTGTTTACAGGGCTTAGAGCACCTGCCAGAGGATTATTACTCTTTGGTCCACCTGGAAATGGGAAGACAATGCTGGCTAAAGCAGTAGCTGCAGAATCTAACGCAACATTTTTTAATATCAGTGCTGCAAGTTTAACTTCAAAATATGTGGGAGAAGGCGAGAAATTGGTGAGAGCTCTTTTTGCTGTGGCTCGAGAACTTCAACCTTCTATAATTTTTATAGATGAAGTTGATAGCCTTTTATGTGAAAGAAGAGAAGGGGAGCATGATGCTAGTAGACGTCTAAAGACTGAATTTCTAATAGAATTTGATGGTGTACAGTCTGCTGGAGATGACAGAGTACTTGTAATGGGTGCAACTAACAGACCACAAGAGCTTGATGAGGCTGTTCTCAGGCGGTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAGACTACTTTTACTTAAAAATCTGTTATGTAAACAAGGAAGTCCATTGACCCAAAAAGAACTAGCACAACTTGCTAGAATGACTGATGGATACTCAGGAAGTGATCTAACAGCTTTGGCAAAAGATGCAGCACTGGGACCTATCCGAGAACTGAAACCAGAACAGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATCGGACTTCACTGAATCCTTGAAAAAAATAAAACGCAGTGTGAGCCCTCAAACTTTAGAAGCATACATACGATGGAACAAGGACTTTGGAGATACCACTGTTTAA

Related Sequences

XP_004839321.1 Protein

Spast PREDICTED: spastin isoform X3 [Heterocephalus glaber]

Length: 584 aa      View alignments
>XP_004839321.1
MSSPGGRGKKKGSGGPSSPVPRRPPPPCPAPAPPVAGPAPPPPSAPKRNLYYFSYPLFAGFALLRLAAFHLGLLFVWLCQRLSRALMAAKRSSRAAPAPASASPPAPEPGGEAERVRAFHKQAFEYISVALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDRLQLLESGAVPKRKDPLTHASNSLPRSKTVMKTGSTGLSGHHRAPSCSGLSMVSGTRQGPGPTTAAHKGTPKINRTNKPSTPTTAARKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFGDTTV