Sequence details NCBI ID: XM_004839238.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Fam179a
Gene Name family with sequence similarity 179, member A, transcript variant X1
Entrez Gene ID 101699882

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FAM179A ENSCPOG00000004687 (Guinea pig)

Gene Details

family with sequence similarity 179, member A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004219, Guinea pig)

Protein Percentage 82.75%
CDS Percentage 88.07%
Ka/Ks Ratio 0.34676 (Ka = 0.0957, Ks = 0.2761)

FAM179A ENSG00000189350 (Human)

Gene Details

family with sequence similarity 179, member A

External Links

Gene Match (Ensembl Protein ID: ENSP00000368876, Human)

Protein Percentage 73.05%
CDS Percentage 80.97%
Ka/Ks Ratio 0.33045 (Ka = 0.167, Ks = 0.5053)

Fam179a ENSMUSG00000045761 (Mouse)

Gene Details

family with sequence similarity 179, member A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000094886, Mouse)

Protein Percentage 75.53%
CDS Percentage 79.46%
Ka/Ks Ratio 0.22045 (Ka = 0.1515, Ks = 0.6871)

Fam179a ENSRNOG00000026344 (Rat)

Gene Details

family with sequence similarity 179, member A

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000038699, Rat)

Protein Percentage 75.31%
CDS Percentage 79.08%
Ka/Ks Ratio 0.22226 (Ka = 0.1541, Ks = 0.6935)

Genome Location

Sequence Coding sequence

Length: 3015 bp    Location: 10902844..10943235   Strand: +
Raw sequence   
>XM_004839238.1
ATGGGCACCCGTGACGATGTCCCCCCAGCCGAGGGTCTGGCTCCAGTGGCCGTGTACTGTGGGAGTGTCCCTAGGACCAGTGCTGGGCCCTGCGCACCCCTGCCTGGAAGCATCAGCTCCTCTGTGCCACATGGCTTTTCCTCCGACCAGCCTGTGCCAAGTGTCCTGCGGGGCCACGAGAAGCCAGCACAGCTCTCGAGTGGATGTGGGGACTCAGGCAGCATCATAGTGGGTGCCCCTCTGAAGGGCTGGCAGGCCAGGAATGGGCACCCCAGGGACCTTGGAGCTCTGTCTTTGGGACTTCTCCCCCGGGTGTCTGTCAGCTTGCTGGAGTCAGAGGCCAACAGCGCGGCCAGAGACACCACCCAGATCAAGGACAAACTCAAGAAGAGGAGGCTCTCGGAGGGCATGGCAGCATCTTTGCGAGCCTCTCTGGATCCCGGGGGAGGCCCCCGCGGAGCCCCTCTGCGGAGCACCGTGCCCCGCACCACTTCCCAGAGGCTGCTGAGGGTGCCCAGGCCGATGCCCCCCATCCAGAGCATCCCTACCACCCCTGAGGCCAGTGGAGCCAAGGAGAAGGGCCTGGACCCCCCCGGGAGCGGGCAGGGGGCCCAGGAGCTGAGAGCTGGTGCTCAGGAGGTGCAGATCTCCCCACAATACCTGCACTGCAATGATGAGAAGATGCAGAAGAGCCTGGGAGGCATCGTGATCCCCCCGATTCCGAAGGCAGGGGTGTCCGTGGGGACCTCTCCCCGCAGGCCTGGCCCCCTTCCCAGTCCCTCGGCTCCAGGCCAGGACATCCTCACAGGAACAAGGCCCCTCCACACACGACTGCTCCAGGAGAGTGGGCTGCGAGAGAAGACCCCTAAATCTCCAGAGCCCAAACCTTTGGCCCCACTCATGAGGGAGGGGTCTGCCACTGCTGCCTCCAAGAAGCCCCTGGCCTCCTCACAGTCTGCTCCCGTGCTGACAGCCTTCTCCTTGAGCCATGCCGAAGAAGACCACACCTTGGTGAAAGAAGAAGACCAGAAGGAATCCGGCACCAAGTTCCAAGTCACCATCTCCAGGTCTGCCCAGGAGAAGATGCGGCTGAAGCAGATGAAGGAGATGGAGTCGCTCCAGAGGGCGAAGGAACCAGAGAGGGAGTGGGCGCTCGCTCCCCAGGGCCTGGGCTCCAGGAGAACCTTCGTGAAGGAAGGTCTCCTTCCCCTCCGGGGCAGTGGGACGCAGTCTATGCCCAGCAGGCTGAGCAGCCCCTGCAGAAACAGCAGCGGCATCCCCCTGAGGAAGCGGGCCAACCGGTCTTCTCTACCCAGCATCCCTGTCGGCAAGCAGGAGCCCAGCTTTGCCCGCCACGCGTCAGCTAACTCGTTACCTGCGGTGCTCACTTTGGGGTCTCCTGAATGGGAGGCAGAGGAGGAGGAGATGGACCTCAGAACCTTCAAGGAATTGCGGCCTTTCTCGAACCCGGAGCTGGGGTTGATGGATGCCCTTCAGGGCCTCAGCAGCAGTGACTGGCAGGTGAAGCAGAAGAGCCTGGTGAGCATCCAGCGCCTGGCAGCCTGTCACCCAGAGGTCCTGGCTGGGAGGCTGCACGACGTGTCGGTGGCAGTGACCGGGGAGGTCACCAACCTCCGCTCCAAGGTGTCCCGCCTGGCCATCAGCACCCTGGGAGACCTTTTCCGGGCTTTGAAGAAGAACATGGACCAGGAGGCTGAGGGGGTCACCCGCTGCCTGCTGCAGAAGATGGGGAACGCCAGCGAGTTCATCCAGCGCGCTGCCAGCCGGGCCCTGGGCGCCATGGTGGAGACCGTGACCCCGGCCCGGGCCCTGACGGCCCTCACCTCAGCAGGCGTCTACCACCGAAACCCCTTAGTCCGGAAATGCACTGCCGAGCACCTCTCAGCTGTCCTGGAGCAGATTGGCGCTGAGAAGCTTCTCTCGGGCAGCAGGGACAGCATAGACATGCTGGTGCACACGCTGGTGAGGCTGGCCCAGGACTCCAACCAGGACACCAGGTTTTATGGCCGGAAGATGGTGACCATCTTGATGGCAAATGCTAAGTTCGACGTGTTTCTGAAGCAGTCCCTTCCATCTCATGACTTGCGGAAAGTCATGGCGGCCATCAAGCAGCGGGGACTAGAAGATAACCATGAACTTCCATCTGCCAAAGGCCGTAAGGTGTCAAGGAGTCTGGTGGCATGTGAGAACGGGCTGCTCATCGAGGAGGGGGTTGGCTCCAATGGCCCGTGGCTGGCAGTACGCTCCTCCCTGCCGGGTGGCGTGGAAATAGCAGAACAACTTCGGGAGCTGAGGAGGCTGCTGGAGGCCAGAGAGTACCAGTCTCGGATGGAAGGCGTGGCGCGGCTCCTTGAGCACTGCAAGACCAAGCCAGAGCTCATCATCGCCAACCTGGTCCAGGTCTTTGATGCTTTCACCCCAAGGCTTCAGGATTCCAACAAGAAAGTGAACCAGTGGGCTCTGGAGTCTCTCGCCAAGATGATCCCCCTCCTCAAGGACAGTGTGCACCCCATGCTGCTCTCCCTCATCATCGCTGTTGCAGACAACCTCAACTCCAAGAACTTGGGGATCACCACTGCTGCCACCTCTGTGCTGGATGCAATGACAGAGAGCCTGGACCACCTCGTCCTCCTCCAAGCGTTTGCTGGGCGGGTGCGCTTCCTGAGCGGCCGTGCAGTGCTGGACATCACGGAACGCCTGTCGGTGCTGGTGGCCTCAGTTTACCCTCAGAAACCTCAGGCCGTGGAACGCCACGTCCTCCCTGTCCTCTGGTACTTCCTAAACAACATGATCAGGAGTGGCACGCTGCCAGGGCTTGGCGGGAACGTCCGCACAGTGGTGTGCCAGCTGTCCAGGACCCTGCAGCAGCAAATGGGTACCCGGCTGCAGGACTTTGCCACTGCCCAGCCAAAGCAAGTCCTCAGAATGCTCCAGGAACTCAACACAGAGTCCCCGGGAGGCCCCCATGAGGTTACCGAGAGAGGCGCCACCTGA

Related Sequences

XP_004839295.1 Protein

Fam179a PREDICTED: protein FAM179A isoform X1 [Heterocephalus glaber]

Length: 1004 aa      View alignments
>XP_004839295.1
MGTRDDVPPAEGLAPVAVYCGSVPRTSAGPCAPLPGSISSSVPHGFSSDQPVPSVLRGHEKPAQLSSGCGDSGSIIVGAPLKGWQARNGHPRDLGALSLGLLPRVSVSLLESEANSAARDTTQIKDKLKKRRLSEGMAASLRASLDPGGGPRGAPLRSTVPRTTSQRLLRVPRPMPPIQSIPTTPEASGAKEKGLDPPGSGQGAQELRAGAQEVQISPQYLHCNDEKMQKSLGGIVIPPIPKAGVSVGTSPRRPGPLPSPSAPGQDILTGTRPLHTRLLQESGLREKTPKSPEPKPLAPLMREGSATAASKKPLASSQSAPVLTAFSLSHAEEDHTLVKEEDQKESGTKFQVTISRSAQEKMRLKQMKEMESLQRAKEPEREWALAPQGLGSRRTFVKEGLLPLRGSGTQSMPSRLSSPCRNSSGIPLRKRANRSSLPSIPVGKQEPSFARHASANSLPAVLTLGSPEWEAEEEEMDLRTFKELRPFSNPELGLMDALQGLSSSDWQVKQKSLVSIQRLAACHPEVLAGRLHDVSVAVTGEVTNLRSKVSRLAISTLGDLFRALKKNMDQEAEGVTRCLLQKMGNASEFIQRAASRALGAMVETVTPARALTALTSAGVYHRNPLVRKCTAEHLSAVLEQIGAEKLLSGSRDSIDMLVHTLVRLAQDSNQDTRFYGRKMVTILMANAKFDVFLKQSLPSHDLRKVMAAIKQRGLEDNHELPSAKGRKVSRSLVACENGLLIEEGVGSNGPWLAVRSSLPGGVEIAEQLRELRRLLEAREYQSRMEGVARLLEHCKTKPELIIANLVQVFDAFTPRLQDSNKKVNQWALESLAKMIPLLKDSVHPMLLSLIIAVADNLNSKNLGITTAATSVLDAMTESLDHLVLLQAFAGRVRFLSGRAVLDITERLSVLVASVYPQKPQAVERHVLPVLWYFLNNMIRSGTLPGLGGNVRTVVCQLSRTLQQQMGTRLQDFATAQPKQVLRMLQELNTESPGGPHEVTERGAT