Details from NCBI annotation

Gene Symbol Snx17
Gene Name sorting nexin 17, transcript variant X1
Entrez Gene ID 101714437

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SNX17 ENSCPOG00000007749 (Guinea pig)

Gene Details

sorting nexin 17

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006980, Guinea pig)

Protein Percentage 98.3%
CDS Percentage 94.82%
Ka/Ks Ratio 0.04409 (Ka = 0.0082, Ks = 0.1858)

SNX17 ENSG00000115234 (Human)

Gene Details

sorting nexin 17

External Links

Gene Match (Ensembl Protein ID: ENSP00000233575, Human)

Protein Percentage 98.72%
CDS Percentage 93.9%
Ka/Ks Ratio 0.0241 (Ka = 0.006, Ks = 0.2485)

Snx17 ENSMUSG00000029146 (Mouse)

Gene Details

sorting nexin 17

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031029, Mouse)

Protein Percentage 97.87%
CDS Percentage 91.84%
Ka/Ks Ratio 0.02802 (Ka = 0.01, Ks = 0.3552)

Genome Location

Sequence Coding sequence

Length: 1413 bp    Location: 9444054..9450685   Strand: +
>XM_004839194.1
ATGCACTTTTCCATTCCTGAAACCGAGTCCCGAAGCGGGGACAGCGGCGGCTCCGCTTACGTGGCCTATAACATTCACGTGAATGGAGTCCTTCACTGTCGGGTTCGCTACAGCCAGCTTCTGGGGCTGCACGAGCAGCTTCGGAAGGAGTATGGGGCAAATGTGCTTCCTGCATTCCCCCCAAAGAAGCTTTTCTCTCTGACACCTGCAGAGGTAGAACAGAGGAGAGAGCAGTTAGAGAAGTACATGCAAGCTGTTCGGCAAGACCCATTGCTTGGGGGCAGTGAGACCTTCAATAGTTTCTTGCGTCGGGCACAGCAGGAGACACAGCAGGTCCCCACGGAGGAAGTTTCCTTGGAAGTGCTGCTCAGCAATGGGCAGAAAGTTTTGGTCAGTGTGCTAACTTCAGATCAGACCGAGGATGTTCTGGAGGCTGTGGCTGCAAAGTTGGATCTTCCAGATGACTTGATCGGATACTTTAGTCTCTTCCTTGTTAGAGAAAAAGAGGATGGATCTTTTTCTTTTGTACGGAAGTTGCAAGAGTTTGAGCTGCCTTATGTGTCTGTTACCAGTCTTCGGAGTCAAGAGTATAAGATTGTGCTAAGAAAGAGTTATTGGGACTCTGCCTATGATGACGATGTCATGGAGAACCGGGTTGGCCTGAACCTGCTTTATGCTCAGACAGTCTCAGATATTGAGCGAGGGTGGATCCTGGTCACTAAAGAGCAGCACCGGCAGCTCAAATCTCTACAGGAGAAGGTCTCCAAAAAGGAGTTCCTGCGGCTGGCCCAAACTCTGCGCCACTATGGTTACCTGCGCTTTGATGCCTGTGTGGCTGACTTCCCAGAGAAGGACTGTCCTGTCGTGGTGAGCGCAGGCAACAGTGAGCTCAGCCTCCAGCTCCGCCTGCCTGGCCAGCAGCTTCGAGAAGGCTCCTTCCGGGTCACCCGCATGCGATGTTGGCGGGTTACCTCCTCTGTGCCACTGCCCAGTGGAAGCACAAATAGCCCAGGCCGAGGCCGGGGTGAAGTGCGCCTGGAACTGGCTTTTGAATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCATCACCAGCCCCCAGGCTATCATGATGAGCATCTGTTTGCAGTCCATGGTAGATGAACTGATGGTGAAGAAATCGGGAGGCAGTATAAGGAAGATGCTGCGCCGGCGGGTGGCAGGTACCCTGAGACGCTCAGACAGCCAGCAGGCAGTGAAGTCTCCACCACTGCTCGAGTCACCTGATGCCAGCCGGGAGTCCATGGTCAAACTCTCAAGTAAGCTGAGTGCTGTGAGCTTGCGCGGGATTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAA

Related Sequences

XP_004839251.1 Protein

Snx17 PREDICTED: sorting nexin-17 isoform X1 [Heterocephalus glaber]

Length: 470 aa      View alignments
>XP_004839251.1
MHFSIPETESRSGDSGGSAYVAYNIHVNGVLHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDPLLGGSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVSVLTSDQTEDVLEAVAAKLDLPDDLIGYFSLFLVREKEDGSFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAYDDDVMENRVGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLPSGSTNSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGGSIRKMLRRRVAGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTDASASDVHGNFAFEGIGDEDL