Details from NCBI annotation

Gene Symbol Otof
Gene Name otoferlin, transcript variant X3
Entrez Gene ID 101698163

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 5934 bp    Location: 8690366..8601287   Strand: -
>XM_004839144.1
ATGGCCCTGCTTGTCCACCTCAAGAGCGTCTCGGAGCTGAGGGGCAAGGGCGACCGGATTGCCAAAGTGACTTTCCGAGGGCAGCCCTTCTACTCCCGGGTCCTGGAGAACTGCGAGGATGTGGCCGACTTTGATGAGACATTCCGGTGGCCAGTGGCCAGCAACATTGACAGAAATGAGATGCTGGAGATTCAGATTTTCAACTATAGCAAAGTCTTCAGCAACAAGTTAATCGGGACCTTCCGCATGGTGCTGCAGAAGGTGGTCGAGGAGAACCACGTGGAGGTGACCGACACGCTGATTGACGACAACAATGCTGTCATCAAGACCAGCCTGAATGTGGAGGTCCGGTATCAGGCTGCAGATGGCACAAGGGGCTCCTGGGATGACGAGGACTTCCTGAGGGATGAGTCTCTTCAGGAGGAAGAGAAGGACACTCAGGAGACAGATGGGCTGCTCCCCAGCTCCCGCCCCAGCTCCCGGCCACCGGGAGAGAAGAGCTTCCGGAGAGCCGGGAGGAGGGTGTTCTCTGCCATGAAGCTCGGCAAGAACCGGCCCCACAAGGAGGAACCCCAGAGACAAGATGAGCCAGCAGTGCTGGAGATGGAGGACCTTGACCACCTGGCCATTCGGCTGGGGGATGGCCTGGACCCCGACTCGGCGTCTCTAGCCTCTGTCACAGCTCTTACCACCAATGTCTCCAACAAGAGATCCAAGCCAGACATTAAGATGGAGCCAAGCGCCGGGCGGCCCATGGATTACCAGGTCAGCATCACGGTGATAGAGGCGCGGCAGCTGGTGGGCTTGAACATGGACCCTGTGGTGTGTGTGGAAGTGGGCGATGACAAGAAGTACACCTCCATGAAGGAGTCCACGAACTGCCCCTACTATAATGAGTACTTCGTCTTCGACTTCCACGTCTCTCCTGACGTCATGTTCGACAAAATCATCAAGATCTCGGTGATTCACTCCAAGAACCTGCTGCGCAGCGGCACCCTGGTGGGGTCCTTCAAAATGGATGTGGGGACCGTGTACTCCCAGCCCGAGCACCAGTTCCATCACAAGTGGGCCATCCTGTCCGACCCCGACGACATCTCCGCCGGGCTGAAAGGCTACGTGAAGTGTGACATCGCCGTGGTGGCCAAGGGAGACAACATCAAGACACCGCACAAGGCCAACGAGACAGATGAAGAGGACATTGAGGGGAACTTGCTGCTCCCTGACGGGGTACCCGCGGAACGCCAGTGGGCCCGCTTCTACGTGAAAATTTATCGCGCGGAGGGGCTGCCCAGGATGAACACAAGCCTCATGGCCAACGTGAAGAAGGCTTTCATCGGCGAAAATAAGGACCTCGTTGACCCCTACGTGCAAGTCTTCTTTGCGGGCCAGAAGGGCAAGACTTCGGTGCAGAAAAACAGCTACGAGCCCCTCTGGAATGAGCAGGTTGTCTTCACAGACCTGTTCCCGCCGCTCTGCAAACGCATGAAGGTGCAGATCCGGGACTGTGACAAGGTCAATGACGTGGCCATCGGCACTCACTTCATCGATCTGCGCAAGATTTCCAATGATGGAGACAAAGGCTTCCTGCCCACGCTGGGCCCGGCCTGGGTGAACATGTACGGCTCCACACGCAACTACACACTGCTGGATGAGCACCAGGACCTGAATGAGGGCCTGGGGGAGGGGGTGTCCTTCCGCGCCCGCCTCATGCTGGGCCTGGCGGTGGAGATCCTGGACACCTCCAACCCTGAGCTCACCAGCTCCACAGAGGTGCAGGTGGAGCAGGCCACCCCTGTCTCAGAGAGCTGCACAGGGAGAGTGGAAGAATTCTTTCTATTTGGAGCCTTTCTGGAAGCCTCAATGATCGACCGGAAGAATGGAGACAAACCAATTACCTTTGAGGTGACCATAGGCAACTATGGGAATGAAGTTGATGGCCTGTCAGGACCCCAGAGGCCTCGGCCCCGGAAAGAGCCCGGGGACGAGGAGGAAGTAGACCTGATCCAGAACTCGAGTGATGACGAGGGTGATGATGGCGGGGATCTGGCCTCGGTGTCCTCCACCCCACCCGTGCGCCCCCAGATCACCGACAGGAACTACTTCCACCTGCCCTACCTGGAGTGCAAGCCCTGCATCTACATCAAGAGCTGGTGGGCGGACCAGCGCCGCCGCCTCTACAATGCCAACATCATGGACCACATCGCAGACAAGCTGGAGGAAGGCCTGAACGACGTACAGGAGATGATCAAAACGGAGAAGTCCTACCCCGAGCGCCGCCTGCGTGGGGTGCTGGAGGAGCTCAGCAGCGGCTGCCACCGCTTCCTCTCCCTCGCGGACAAGGACCAGGGCCACTCGTATCGCACCAAGCTGGATCGAGAACGCCTCAAATCATGCATGAGGGAGCTGGAGAGCATGGGGCAGCAGGCCAAGAGCCTGCGCGCTCAGGTGAAGCGGCACACGGTGCGCGACAAGCTGAGGCAGTGCCAGAACTTCCTGCAGAAGCTGCGCTTCCTGGCAGATGAGCCCCAGCACAGCATCCCCGACGTCTTCATCTGGATGATGAGCAACAACAAGCGCGCAGCCTACGCCCGCGTGCCCTCCAGAGACCTGCTCTTCTCCACCGTGGAGGAGGAGCTGGGCAAGGACTGCGCCAAGGTCAAGACGCTGTTCCTCAAGCTGCCGGGGAAGCGGGGCTTTGGCGCAGCGGGCTGGACGGTGCAGGCCAAGCTGGAGCTCTACCTGTGGCTGGGCCTCAGCAAGCAGCGGAAGGACTTCCTGTGTGGCCTGCCCTGCGGCTTCGAGGAGGTCAAGGCGGCCAGGGGCCTGGGCCTGCACTCCTTCCCACCCCTCAGCCTGGTGTACACTAAAAAGCAGGCGTTCCAGCTCCGAGCCCACATGTACCAGGCCCGAAGCCTCTTTGCCGCAGACAGCAGCGGGCTCTCTGACCCCTTTGCCCGAGTCTTCTTCATCAACCAGAGCCAGTGCACAGAGGTGTTGAACGAGACACTGTGTCCCACTTGGGACCAGATGCTGGTGTTTGACAACCTGGAATTGTATGGTGAAGCTCATGAGTTGCGGGAGGACCCTCCCATCACTGTCATCGAAATCTACGATCAGGACAGCATGGGCAAAGCCGACTTCATGGGCCGGACCTTCGCCAAGCCCCTGGTAAAGATGGCAGATGAGGCATACTGCCCGCCCCGCTTCCCGCCCCAGCTCGAGTACTACCAGATCTACCGCGGCAACGCCACAGCTGGAGACCTGCTGGCTGCCTTTGAGCTCCTGCAGATTGGGCCAGCAGGGAAGGCTGACCTGCCCCCCATCAATGCCCCAGTGGACACGGACCGGGGGCCCATCATGCCTGTGCCTGTGGGCATCCGGCCTGTGCTCAGCAAGTACCGGGTGGAGGTGCTGTTCTGGGGCCTGCGGGACCTGAAGCGGGTGAACCTGGCCCAGGTGGACCGGCCTCGGGTAGACATCGAGTGTGCAGGGAAGGGGGTGCAGTCATCCCTGATCCACAACTACAAGAAGAACCCCAACTTCAACACCCTGGTCAAGTGGTTTGAAGTGGACCTCCCCGAGAACGAGCTGCTGCACCCGCCCCTGAACATCCGTGTGGTGGACTGCCGGGCCTTCGGCCGATACACCCTGGTGGGCTCGCATGCCGTCAGCTCCCTGCGCCGCTTCATCTACCGGCCGCCCGAGCACACAGCCCCCAAGTGGAACACCACGGGGGAGGTCGTGGTGAGCATGGAGCCAGAGGTGCCTGTCAGGAAACTGGAGACCATGGTGAAGCTGGACGCGACTTCTGATGCTGTTGTCACGGTGGATGTGGCCGAGGAGGAGAAGGAGAAAAGGAAGAAGAAAAAGGGCAGCGCAGAAGAGCCCGAGGAGGAGGAGCCGGATGAGAGCATGCTGGACTGGTGGTCCAAGTACTTCGCCTCCATCGACACCATGAAGGAGCAACTTCGCCAACAAGAGACCTTGGGAGCTGACTTGGAAGAGAAGGAAGAGGCGGACAACACAGAAGGCCTGAAGGGGCCGATGAAGGGCAAGGAGAAGGCAAGGGCAACAAAGGAGGAGAAGAAGAAACGAGCCCAGAGCCCAGGCCCTGGCCAGGGGTCCGAGGTCCCTGAGAAGAAGAAACCCAAGATTGATGAGCTAAAGGTGTACCCTAAGGAGCTGGAGTCCGAGTTTGACAACTTTGAGGACTGGCTGCACACGTTCAACCTGCTTCGGGGCAAGACCCAGGATGGCGAGGACTGCTCCACTGAGGAGGAGCGCACTGTGGGCCGGTTCAAGGGCTCTCTCTGCGTCTACAAAGTGCCTCTCCCAGAGGACATATCCCGGGAAGCCGGCTACGATCCCACCTTCGGCATGTTCCAGGGCATCCCGAGCAACGACTCCATCAATGTGCTGGTCCGAGTGTATGTGGTCCGGGCCACAGATCTACACCCTGCTGACATCAACGGCAAAGCTGACCCCTACATCGCCATCCGGCTAGGCAAGACCGACATCCGCGACAAGGAGAACTACATCTCCAAGCAGCTCAACCCGGTCTTTGGGAAGTCCTTCGACATCCAGGCCTCCTTCCCCATGGAGTCCATGCTCACGGTGGCTGTGTACGACTGGGACCTGGTGGGCACGGACGACCTCATCGGGGAAACCAAGATCGACCTGGAGAACCGCTTCTACAGCAAACACCGCGCCACCTGCGGCGTGGCCCAGACCTACTCCACACACGGCTACAATGTCTGGAGGGACCCCGCGAAGCCCAGCCAGATCCTCACGCGCCTCTGCAAAGTGGGCAAGGTGGACGGGCCCCACTTCGGGCCCCCCGGGAGAGTGAAGGTGGCCAACCGCGTCTTCACGGGGCCCTCGGAGATCGAGGACGAGAATGGTCAGAGGAAGCCCACTGACGAGCACGTGGCCCTGTCTGCCCTGAGGCACTGGGAGGACATCCCCCGCGTGGGCTGCCGCCTGGTGCCAGAGCACGTTGAGACCCGGCCGCTGCTCAACCCTGACAAGCCAGGCATCGAGCAGGGCCGCCTGGAGCTGTGGGTGGACATGTTTCCCATGGACATGCCGGCCCCCGGGACACCGCTGGACATCTCCCCCCGGAAGCCCAAGAAGTATGAGCTACGGGTCATCGTGTGGAACACAGACGAGGTGGTCCTGGAGGACGACGACTTCTTCACCGGGGAGAAGTCCAGCGACATTTTCGTGCGGGGGTGGCTGAAGGGCCAGCAGGAGGACAAGCAGGACACGGACGTGCATTACCACTCCCTCACTGGGGAGGGCAACTTCAACTGGCGCTACCTGTTCCCCTTCGACTACCTGGCGGCCGAGGAGAAGATCGTCATCTCCAAGAAAGAGTCCATGTTCTCGTGGGACGAGACGGAGTACAAAATCCCCGCGCGCCTCACCCTGCAGATCTGGGATGCAGACCACTTCTCCGCCGACGACTTCCTGGGGGCCATCGAGCTGGACCTGAACCGGTTCCCCCGGGGCGCGAAGACAGCCAAGCAGTGCAGCATGGAGATGGCCACCGGGGAGGTGGATGTGCCACTGGTCTCCATCTTCAAGCAGAAGCGCGTCAAAGGCTGGTGGCCCCTCCTGGCCCGCAATGAGAACGACGAGTTCGAGCTCACGGGCAAGGTGGAAGCTGAGCTGCACTTGCTGACAGCAGAGGAGGCGGAGAAGAATCCAGTGGGCCTGGCCCGCAGTGAACCTGACCCCCTAGAGAAACCCAACCGGCCCGACACAAGCTTCATCTGGTTCTTGAGCCCTCTCAAGTCTGCTCGCTACTTCCTGTGGCACACCTACCGCTGGCTGCTCCTCAAGCTGCTGCTGCTCCTGCTGCTGTTCCTCCTGCTCGCCCTCTTTCTCTACTCTGTGCCTGGCTACCTGGCCAAGAAGATTGTCAGGGCCTGA

Related Sequences

XP_004839201.1 Protein

Otof PREDICTED: otoferlin isoform X3 [Heterocephalus glaber]

Length: 1977 aa     
>XP_004839201.1
MALLVHLKSVSELRGKGDRIAKVTFRGQPFYSRVLENCEDVADFDETFRWPVASNIDRNEMLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENHVEVTDTLIDDNNAVIKTSLNVEVRYQAADGTRGSWDDEDFLRDESLQEEEKDTQETDGLLPSSRPSSRPPGEKSFRRAGRRVFSAMKLGKNRPHKEEPQRQDEPAVLEMEDLDHLAIRLGDGLDPDSASLASVTALTTNVSNKRSKPDIKMEPSAGRPMDYQVSITVIEARQLVGLNMDPVVCVEVGDDKKYTSMKESTNCPYYNEYFVFDFHVSPDVMFDKIIKISVIHSKNLLRSGTLVGSFKMDVGTVYSQPEHQFHHKWAILSDPDDISAGLKGYVKCDIAVVAKGDNIKTPHKANETDEEDIEGNLLLPDGVPAERQWARFYVKIYRAEGLPRMNTSLMANVKKAFIGENKDLVDPYVQVFFAGQKGKTSVQKNSYEPLWNEQVVFTDLFPPLCKRMKVQIRDCDKVNDVAIGTHFIDLRKISNDGDKGFLPTLGPAWVNMYGSTRNYTLLDEHQDLNEGLGEGVSFRARLMLGLAVEILDTSNPELTSSTEVQVEQATPVSESCTGRVEEFFLFGAFLEASMIDRKNGDKPITFEVTIGNYGNEVDGLSGPQRPRPRKEPGDEEEVDLIQNSSDDEGDDGGDLASVSSTPPVRPQITDRNYFHLPYLECKPCIYIKSWWADQRRRLYNANIMDHIADKLEEGLNDVQEMIKTEKSYPERRLRGVLEELSSGCHRFLSLADKDQGHSYRTKLDRERLKSCMRELESMGQQAKSLRAQVKRHTVRDKLRQCQNFLQKLRFLADEPQHSIPDVFIWMMSNNKRAAYARVPSRDLLFSTVEEELGKDCAKVKTLFLKLPGKRGFGAAGWTVQAKLELYLWLGLSKQRKDFLCGLPCGFEEVKAARGLGLHSFPPLSLVYTKKQAFQLRAHMYQARSLFAADSSGLSDPFARVFFINQSQCTEVLNETLCPTWDQMLVFDNLELYGEAHELREDPPITVIEIYDQDSMGKADFMGRTFAKPLVKMADEAYCPPRFPPQLEYYQIYRGNATAGDLLAAFELLQIGPAGKADLPPINAPVDTDRGPIMPVPVGIRPVLSKYRVEVLFWGLRDLKRVNLAQVDRPRVDIECAGKGVQSSLIHNYKKNPNFNTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHAVSSLRRFIYRPPEHTAPKWNTTGEVVVSMEPEVPVRKLETMVKLDATSDAVVTVDVAEEEKEKRKKKKGSAEEPEEEEPDESMLDWWSKYFASIDTMKEQLRQQETLGADLEEKEEADNTEGLKGPMKGKEKARATKEEKKKRAQSPGPGQGSEVPEKKKPKIDELKVYPKELESEFDNFEDWLHTFNLLRGKTQDGEDCSTEEERTVGRFKGSLCVYKVPLPEDISREAGYDPTFGMFQGIPSNDSINVLVRVYVVRATDLHPADINGKADPYIAIRLGKTDIRDKENYISKQLNPVFGKSFDIQASFPMESMLTVAVYDWDLVGTDDLIGETKIDLENRFYSKHRATCGVAQTYSTHGYNVWRDPAKPSQILTRLCKVGKVDGPHFGPPGRVKVANRVFTGPSEIEDENGQRKPTDEHVALSALRHWEDIPRVGCRLVPEHVETRPLLNPDKPGIEQGRLELWVDMFPMDMPAPGTPLDISPRKPKKYELRVIVWNTDEVVLEDDDFFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYLFPFDYLAAEEKIVISKKESMFSWDETEYKIPARLTLQIWDADHFSADDFLGAIELDLNRFPRGAKTAKQCSMEMATGEVDVPLVSIFKQKRVKGWWPLLARNENDEFELTGKVEAELHLLTAEEAEKNPVGLARSEPDPLEKPNRPDTSFIWFLSPLKSARYFLWHTYRWLLLKLLLLLLLFLLLALFLYSVPGYLAKKIVRA