Details from NCBI annotation

Gene Symbol Otof
Gene Name otoferlin, transcript variant X1
Entrez Gene ID 101698163

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 5979 bp    Location: 8690366..8599824   Strand: -
>XM_004839142.1
ATGGCCCTGCTTGTCCACCTCAAGAGCGTCTCGGAGCTGAGGGGCAAGGGCGACCGGATTGCCAAAGTGACTTTCCGAGGGCAGCCCTTCTACTCCCGGGTCCTGGAGAACTGCGAGGATGTGGCCGACTTTGATGAGACATTCCGGTGGCCAGTGGCCAGCAACATTGACAGAAATGAGATGCTGGAGATTCAGATTTTCAACTATAGCAAAGTCTTCAGCAACAAGTTAATCGGGACCTTCCGCATGGTGCTGCAGAAGGTGGTCGAGGAGAACCACGTGGAGGTGACCGACACGCTGATTGACGACAACAATGCTGTCATCAAGACCAGCCTGAATGTGGAGGTCCGGTATCAGGCTGCAGATGGCACAAGGGGCTCCTGGGATGACGAGGACTTCCTGAGGGATGAGTCTCTTCAGGAGGAAGAGAAGGACACTCAGGAGACAGATGGGCTGCTCCCCAGCTCCCGCCCCAGCTCCCGGCCACCGGGAGAGAAGAGCTTCCGGAGCAAAGGCAGAGAGAAGACCAAGGGAGCCAGAGATGGCGAGCACAAAGCCGGGAGGAGGGTGTTCTCTGCCATGAAGCTCGGCAAGAACCGGCCCCACAAGGAGGAACCCCAGAGACAAGATGAGCCAGCAGTGCTGGAGATGGAGGACCTTGACCACCTGGCCATTCGGCTGGGGGATGGCCTGGACCCCGACTCGGCGTCTCTAGCCTCTGTCACAGCTCTTACCACCAATGTCTCCAACAAGAGATCCAAGCCAGACATTAAGATGGAGCCAAGCGCCGGGCGGCCCATGGATTACCAGGTCAGCATCACGGTGATAGAGGCGCGGCAGCTGGTGGGCTTGAACATGGACCCTGTGGTGTGTGTGGAAGTGGGCGATGACAAGAAGTACACCTCCATGAAGGAGTCCACGAACTGCCCCTACTATAATGAGTACTTCGTCTTCGACTTCCACGTCTCTCCTGACGTCATGTTCGACAAAATCATCAAGATCTCGGTGATTCACTCCAAGAACCTGCTGCGCAGCGGCACCCTGGTGGGGTCCTTCAAAATGGATGTGGGGACCGTGTACTCCCAGCCCGAGCACCAGTTCCATCACAAGTGGGCCATCCTGTCCGACCCCGACGACATCTCCGCCGGGCTGAAAGGCTACGTGAAGTGTGACATCGCCGTGGTGGCCAAGGGAGACAACATCAAGACACCGCACAAGGCCAACGAGACAGATGAAGAGGACATTGAGGGGAACTTGCTGCTCCCTGACGGGGTACCCGCGGAACGCCAGTGGGCCCGCTTCTACGTGAAAATTTATCGCGCGGAGGGGCTGCCCAGGATGAACACAAGCCTCATGGCCAACGTGAAGAAGGCTTTCATCGGCGAAAATAAGGACCTCGTTGACCCCTACGTGCAAGTCTTCTTTGCGGGCCAGAAGGGCAAGACTTCGGTGCAGAAAAACAGCTACGAGCCCCTCTGGAATGAGCAGGTTGTCTTCACAGACCTGTTCCCGCCGCTCTGCAAACGCATGAAGGTGCAGATCCGGGACTGTGACAAGGTCAATGACGTGGCCATCGGCACTCACTTCATCGATCTGCGCAAGATTTCCAATGATGGAGACAAAGGCTTCCTGCCCACGCTGGGCCCGGCCTGGGTGAACATGTACGGCTCCACACGCAACTACACACTGCTGGATGAGCACCAGGACCTGAATGAGGGCCTGGGGGAGGGGGTGTCCTTCCGCGCCCGCCTCATGCTGGGCCTGGCGGTGGAGATCCTGGACACCTCCAACCCTGAGCTCACCAGCTCCACAGAGGTGCAGGTGGAGCAGGCCACCCCTGTCTCAGAGAGCTGCACAGGGAGAGTGGAAGAATTCTTTCTATTTGGAGCCTTTCTGGAAGCCTCAATGATCGACCGGAAGAATGGAGACAAACCAATTACCTTTGAGGTGACCATAGGCAACTATGGGAATGAAGTTGATGGCCTGTCAGGACCCCAGAGGCCTCGGCCCCGGAAAGAGCCCGGGGACGAGGAGGAAGTAGACCTGATCCAGAACTCGAGTGATGACGAGGGTGATGATGGCGGGGATCTGGCCTCGGTGTCCTCCACCCCACCCGTGCGCCCCCAGATCACCGACAGGAACTACTTCCACCTGCCCTACCTGGAGTGCAAGCCCTGCATCTACATCAAGAGCTGGTGGGCGGACCAGCGCCGCCGCCTCTACAATGCCAACATCATGGACCACATCGCAGACAAGCTGGAGGAAGGCCTGAACGACGTACAGGAGATGATCAAAACGGAGAAGTCCTACCCCGAGCGCCGCCTGCGTGGGGTGCTGGAGGAGCTCAGCAGCGGCTGCCACCGCTTCCTCTCCCTCGCGGACAAGGACCAGGGCCACTCGTATCGCACCAAGCTGGATCGAGAACGCCTCAAATCATGCATGAGGGAGCTGGAGAGCATGGGGCAGCAGGCCAAGAGCCTGCGCGCTCAGGTGAAGCGGCACACGGTGCGCGACAAGCTGAGGCAGTGCCAGAACTTCCTGCAGAAGCTGCGCTTCCTGGCAGATGAGCCCCAGCACAGCATCCCCGACGTCTTCATCTGGATGATGAGCAACAACAAGCGCGCAGCCTACGCCCGCGTGCCCTCCAGAGACCTGCTCTTCTCCACCGTGGAGGAGGAGCTGGGCAAGGACTGCGCCAAGGTCAAGACGCTGTTCCTCAAGCTGCCGGGGAAGCGGGGCTTTGGCGCAGCGGGCTGGACGGTGCAGGCCAAGCTGGAGCTCTACCTGTGGCTGGGCCTCAGCAAGCAGCGGAAGGACTTCCTGTGTGGCCTGCCCTGCGGCTTCGAGGAGGTCAAGGCGGCCAGGGGCCTGGGCCTGCACTCCTTCCCACCCCTCAGCCTGGTGTACACTAAAAAGCAGGCGTTCCAGCTCCGAGCCCACATGTACCAGGCCCGAAGCCTCTTTGCCGCAGACAGCAGCGGGCTCTCTGACCCCTTTGCCCGAGTCTTCTTCATCAACCAGAGCCAGTGCACAGAGGTGTTGAACGAGACACTGTGTCCCACTTGGGACCAGATGCTGGTGTTTGACAACCTGGAATTGTATGGTGAAGCTCATGAGTTGCGGGAGGACCCTCCCATCACTGTCATCGAAATCTACGATCAGGACAGCATGGGCAAAGCCGACTTCATGGGCCGGACCTTCGCCAAGCCCCTGGTAAAGATGGCAGATGAGGCATACTGCCCGCCCCGCTTCCCGCCCCAGCTCGAGTACTACCAGATCTACCGCGGCAACGCCACAGCTGGAGACCTGCTGGCTGCCTTTGAGCTCCTGCAGATTGGGCCAGCAGGGAAGGCTGACCTGCCCCCCATCAATGCCCCAGTGGACACGGACCGGGGGCCCATCATGCCTGTGCCTGTGGGCATCCGGCCTGTGCTCAGCAAGTACCGGGTGGAGGTGCTGTTCTGGGGCCTGCGGGACCTGAAGCGGGTGAACCTGGCCCAGGTGGACCGGCCTCGGGTAGACATCGAGTGTGCAGGGAAGGGGGTGCAGTCATCCCTGATCCACAACTACAAGAAGAACCCCAACTTCAACACCCTGGTCAAGTGGTTTGAAGTGGACCTCCCCGAGAACGAGCTGCTGCACCCGCCCCTGAACATCCGTGTGGTGGACTGCCGGGCCTTCGGCCGATACACCCTGGTGGGCTCGCATGCCGTCAGCTCCCTGCGCCGCTTCATCTACCGGCCGCCCGAGCACACAGCCCCCAAGTGGAACACCACGGGGGAGGTCGTGGTGAGCATGGAGCCAGAGGTGCCTGTCAGGAAACTGGAGACCATGGTGAAGCTGGACGCGACTTCTGATGCTGTTGTCACGGTGGATGTGGCCGAGGAGGAGAAGGAGAAAAGGAAGAAGAAAAAGGGCAGCGCAGAAGAGCCCGAGGAGGAGGAGCCGGATGAGAGCATGCTGGACTGGTGGTCCAAGTACTTCGCCTCCATCGACACCATGAAGGAGCAACTTCGCCAACAAGAGACCTTGGGAGCTGACTTGGAAGAGAAGGAAGAGGCGGACAACACAGAAGGCCTGAAGGGGCCGATGAAGGGCAAGGAGAAGGCAAGGGCAACAAAGGAGGAGAAGAAGAAACGAGCCCAGAGCCCAGGCCCTGGCCAGGGGTCCGAGGTCCCTGAGAAGAAGAAACCCAAGATTGATGAGCTAAAGGTGTACCCTAAGGAGCTGGAGTCCGAGTTTGACAACTTTGAGGACTGGCTGCACACGTTCAACCTGCTTCGGGGCAAGACCCAGGATGGCGAGGACTGCTCCACTGAGGAGGAGCGCACTGTGGGCCGGTTCAAGGGCTCTCTCTGCGTCTACAAAGTGCCTCTCCCAGAGGACATATCCCGGGAAGCCGGCTACGATCCCACCTTCGGCATGTTCCAGGGCATCCCGAGCAACGACTCCATCAATGTGCTGGTCCGAGTGTATGTGGTCCGGGCCACAGATCTACACCCTGCTGACATCAACGGCAAAGCTGACCCCTACATCGCCATCCGGCTAGGCAAGACCGACATCCGCGACAAGGAGAACTACATCTCCAAGCAGCTCAACCCGGTCTTTGGGAAGTCCTTCGACATCCAGGCCTCCTTCCCCATGGAGTCCATGCTCACGGTGGCTGTGTACGACTGGGACCTGGTGGGCACGGACGACCTCATCGGGGAAACCAAGATCGACCTGGAGAACCGCTTCTACAGCAAACACCGCGCCACCTGCGGCGTGGCCCAGACCTACTCCACACACGGCTACAATGTCTGGAGGGACCCCGCGAAGCCCAGCCAGATCCTCACGCGCCTCTGCAAAGTGGGCAAGGTGGACGGGCCCCACTTCGGGCCCCCCGGGAGAGTGAAGGTGGCCAACCGCGTCTTCACGGGGCCCTCGGAGATCGAGGACGAGAATGGTCAGAGGAAGCCCACTGACGAGCACGTGGCCCTGTCTGCCCTGAGGCACTGGGAGGACATCCCCCGCGTGGGCTGCCGCCTGGTGCCAGAGCACGTTGAGACCCGGCCGCTGCTCAACCCTGACAAGCCAGGCATCGAGCAGGGCCGCCTGGAGCTGTGGGTGGACATGTTTCCCATGGACATGCCGGCCCCCGGGACACCGCTGGACATCTCCCCCCGGAAGCCCAAGAAGTATGAGCTACGGGTCATCGTGTGGAACACAGACGAGGTGGTCCTGGAGGACGACGACTTCTTCACCGGGGAGAAGTCCAGCGACATTTTCGTGCGGGGGTGGCTGAAGGGCCAGCAGGAGGACAAGCAGGACACGGACGTGCATTACCACTCCCTCACTGGGGAGGGCAACTTCAACTGGCGCTACCTGTTCCCCTTCGACTACCTGGCGGCCGAGGAGAAGATCGTCATCTCCAAGAAAGAGTCCATGTTCTCGTGGGACGAGACGGAGTACAAAATCCCCGCGCGCCTCACCCTGCAGATCTGGGATGCAGACCACTTCTCCGCCGACGACTTCCTGGGGGCCATCGAGCTGGACCTGAACCGGTTCCCCCGGGGCGCGAAGACAGCCAAGCAGTGCAGCATGGAGATGGCCACCGGGGAGGTGGATGTGCCACTGGTCTCCATCTTCAAGCAGAAGCGCGTCAAAGGCTGGTGGCCCCTCCTGGCCCGCAATGAGAACGACGAGTTCGAGCTCACGGGCAAGGTGGAAGCTGAGCTGCACTTGCTGACAGCAGAGGAGGCGGAGAAGAATCCAGTGGGCCTGGCCCGCAGTGAACCTGACCCCCTAGAGAAACCCAACCGGCCCGACACCGCCTTCGTCTGGTTCCTGAACCCACTCAAGTCCATCAAGTACCTCATCTGCACCCGGTACAAGTGGCTCATCATCAAGGTCGTGCTGGCATTGCTGGGGCTGCTCATGCTGGGCCTGTTCCTCTACAGCCTTCCCGGCTACATGGTCAAGAAGCTCCTGGGCGCGTGA

Related Sequences

XP_004839199.1 Protein

Otof PREDICTED: otoferlin isoform X1 [Heterocephalus glaber]

Length: 1992 aa     
>XP_004839199.1
MALLVHLKSVSELRGKGDRIAKVTFRGQPFYSRVLENCEDVADFDETFRWPVASNIDRNEMLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENHVEVTDTLIDDNNAVIKTSLNVEVRYQAADGTRGSWDDEDFLRDESLQEEEKDTQETDGLLPSSRPSSRPPGEKSFRSKGREKTKGARDGEHKAGRRVFSAMKLGKNRPHKEEPQRQDEPAVLEMEDLDHLAIRLGDGLDPDSASLASVTALTTNVSNKRSKPDIKMEPSAGRPMDYQVSITVIEARQLVGLNMDPVVCVEVGDDKKYTSMKESTNCPYYNEYFVFDFHVSPDVMFDKIIKISVIHSKNLLRSGTLVGSFKMDVGTVYSQPEHQFHHKWAILSDPDDISAGLKGYVKCDIAVVAKGDNIKTPHKANETDEEDIEGNLLLPDGVPAERQWARFYVKIYRAEGLPRMNTSLMANVKKAFIGENKDLVDPYVQVFFAGQKGKTSVQKNSYEPLWNEQVVFTDLFPPLCKRMKVQIRDCDKVNDVAIGTHFIDLRKISNDGDKGFLPTLGPAWVNMYGSTRNYTLLDEHQDLNEGLGEGVSFRARLMLGLAVEILDTSNPELTSSTEVQVEQATPVSESCTGRVEEFFLFGAFLEASMIDRKNGDKPITFEVTIGNYGNEVDGLSGPQRPRPRKEPGDEEEVDLIQNSSDDEGDDGGDLASVSSTPPVRPQITDRNYFHLPYLECKPCIYIKSWWADQRRRLYNANIMDHIADKLEEGLNDVQEMIKTEKSYPERRLRGVLEELSSGCHRFLSLADKDQGHSYRTKLDRERLKSCMRELESMGQQAKSLRAQVKRHTVRDKLRQCQNFLQKLRFLADEPQHSIPDVFIWMMSNNKRAAYARVPSRDLLFSTVEEELGKDCAKVKTLFLKLPGKRGFGAAGWTVQAKLELYLWLGLSKQRKDFLCGLPCGFEEVKAARGLGLHSFPPLSLVYTKKQAFQLRAHMYQARSLFAADSSGLSDPFARVFFINQSQCTEVLNETLCPTWDQMLVFDNLELYGEAHELREDPPITVIEIYDQDSMGKADFMGRTFAKPLVKMADEAYCPPRFPPQLEYYQIYRGNATAGDLLAAFELLQIGPAGKADLPPINAPVDTDRGPIMPVPVGIRPVLSKYRVEVLFWGLRDLKRVNLAQVDRPRVDIECAGKGVQSSLIHNYKKNPNFNTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHAVSSLRRFIYRPPEHTAPKWNTTGEVVVSMEPEVPVRKLETMVKLDATSDAVVTVDVAEEEKEKRKKKKGSAEEPEEEEPDESMLDWWSKYFASIDTMKEQLRQQETLGADLEEKEEADNTEGLKGPMKGKEKARATKEEKKKRAQSPGPGQGSEVPEKKKPKIDELKVYPKELESEFDNFEDWLHTFNLLRGKTQDGEDCSTEEERTVGRFKGSLCVYKVPLPEDISREAGYDPTFGMFQGIPSNDSINVLVRVYVVRATDLHPADINGKADPYIAIRLGKTDIRDKENYISKQLNPVFGKSFDIQASFPMESMLTVAVYDWDLVGTDDLIGETKIDLENRFYSKHRATCGVAQTYSTHGYNVWRDPAKPSQILTRLCKVGKVDGPHFGPPGRVKVANRVFTGPSEIEDENGQRKPTDEHVALSALRHWEDIPRVGCRLVPEHVETRPLLNPDKPGIEQGRLELWVDMFPMDMPAPGTPLDISPRKPKKYELRVIVWNTDEVVLEDDDFFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYLFPFDYLAAEEKIVISKKESMFSWDETEYKIPARLTLQIWDADHFSADDFLGAIELDLNRFPRGAKTAKQCSMEMATGEVDVPLVSIFKQKRVKGWWPLLARNENDEFELTGKVEAELHLLTAEEAEKNPVGLARSEPDPLEKPNRPDTAFVWFLNPLKSIKYLICTRYKWLIIKVVLALLGLLMLGLFLYSLPGYMVKKLLGA