Sequence details NCBI ID: XM_004839053.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pum2
Gene Name pumilio homolog 2 (Drosophila), transcript variant X10
Entrez Gene ID 101724249

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PUM2 ENSCPOG00000007075 (Guinea pig)

Gene Details

pumilio RNA-binding family member 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006382, Guinea pig)

Protein Percentage 95.75%
CDS Percentage 92.82%
Ka/Ks Ratio 0.08523 (Ka = 0.0212, Ks = 0.249)

PUM2 ENSG00000055917 (Human)

Gene Details

pumilio RNA-binding family member 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000338173, Human)

Protein Percentage 95.86%
CDS Percentage 92.98%
Ka/Ks Ratio 0.07681 (Ka = 0.0195, Ks = 0.2544)

Pum2 ENSMUSG00000020594 (Mouse)

Gene Details

pumilio 2 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000128292, Mouse)

Protein Percentage 95.19%
CDS Percentage 91.52%
Ka/Ks Ratio 0.07197 (Ka = 0.023, Ks = 0.3197)

Pum2 ENSRNOG00000006180 (Rat)

Gene Details

pumilio homolog 2 (Drosophila) (Pum2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008359, Rat)

Protein Percentage 95.09%
CDS Percentage 91.75%
Ka/Ks Ratio 0.07692 (Ka = 0.0234, Ks = 0.3048)

Genome Location

Sequence Coding sequence

Length: 3195 bp    Location: 3042333..2953867   Strand: -
Raw sequence   
>XM_004839053.1
ATGAATCATGATTTTCAAGCTCTTGCATTAGAATCTCGGGGAATGGGAGAGCTTTTGCCTACCAAAAAATTTTGGGACCCTGATGATCCAACAAAAGATGGAGAAAAAGGCGTATTTCTCGGGGGTGATGAGTGGAGAGAGACTGCGTGGGGACCTTCTCATCATTCAGTGTCCCAGCCTATTATGGTACAAAGAAGATCTGGACAGGGTTTTCATGGAAACAGTGAAGTAAATGCAATATTGTCTCCGCGATCAGAAAGTGGAGGCCTTGGTGTGAGCATGGTAGAATATGTATTAAGTTCCTCTCCTGCTGATAAATTGGATTCTCGATTTAGGAAGGGAACTTTTGGAACTAGAGATGCTGAAGCAGATGGACCTGAGAGAGGAGATCAGAAAGGCAAGGCGTCTCCATTTGAGGAGGACCAGGACAGAGATCTCAAACAAGGAGAGGATGGCGACCCTAAACTAAATGGAAGAGGTTTGCCAAATGGAGTGGATGCCGATGGCAAAGATTTTAATCGTACTCCTGGAAGTCGTCAGGCCTCTCCAACTGAAGTAGTTGAGCGCCTTGGCCCCAGTACTAATCCTCCAGAAGGACTGGGTCCTCTTCCCAATCCTACAGCTAATAAACCACTTGTTGAAGAATTTTCACATCCTGAAACTCAGAATCTGGATGCCATGGAACAAGTTGGTCTGGATTCCTTACAGTTTGACTATCCTGGTAATCAGGTACCCATGGACTCTTCAGGAGCTGCTGTAGGCCTTTTTGACTACAATTCTCAGCAGCAGCTCTTTCAGAGGACTAATGCACTAACAGTTCAGCAGTTAACTGCAGCTCAACAGCAGCAATATGCATTAGCAGCAGCTCAGCAGCCACATATAGCTGGTATATTCTCAGCAGGCCTTGCTCCAGCTGCATTTGTGCCAAATCCATATATTATTAGTGCTGCTCCTCCAGGGACCGATCCATATACTGCAGCAGGTTTGGCTGCAGCAGCAACATTGGCAGGTCCAGCAGTGGTTCCACCACAGTATTATGGTGTTCCATGGGGGGTGTATCCAGCCAATTTATTTCAGCAGCAAGCTGCTGCGGCAGCAAACAGCACAGCCAGTCAGCAAGCAGCATCACAAGCACAACCTGGACAGCAACAGGTTCTTCGTGCTGGAGGTGGTCAGCGTCCTCTTACTCCCAACCAGGGTCAACAAGGACAGCAAGCAGAATCACTTGCAGCAGCTGCAGCTGCAAATCCAACTTTGGCTTTTGGGCAGGGTCTGGCTACAGGAATGCCAGGCTATCAAGTATTAGCTCCGACTGCCTATTACGATCAGACTGGTGCCTTAGTGGTTGGCCCTGGAGCAAGAACTGGCCTTGGAGCTCCAGTTCGGTTAATGGCTCCAACACCTGTTTTAATTAGTTCAGCAGCAGCACAAGCTGCAGCAGCAGCAGCAGCTGGTGGAACTGCAAATGGTCTCACAAGCAGCACAAGTGGTCTGTTCCGACCTATCGGCACCCAGCCACAGCAGCAGCAGCAGCCGCCGCCCAGCACTAATCTGCAGTCGAACTCATTTTATGGGAGCAGTTCTTTGACGAGTAACTCCCAGAGCAGTTCCCTATTTTCTCATGGACCCGGTCAGCCTGGAAGCACATCTCTTGGCTTTGGAAGTGGTAGCTCTTTGGGTGCTGCTATAGGCTCAGCCCTCAGTGGATTTGGTTCATCAGTTGGCAGTTCTGCAAGTAGTAGTGCCACAAGGAGAGAGTCTCTATCTACTAGCTCTGACTTGTACAAAAGATCTAGTAGCAGCCTAGCACCCATAGGGCAACCATTTTACAATAGTCTGGGATTTTCCTCCTCTCCAAGTCCAATAGGCATGCCTCTGCCAAGCCAAACTCCAGGACATTCACTTACGCCACCGCCATCACTTTCATCACATGGATCCTCATCCAGTTTGCATTTAGGAGGACTGACCAATGGTAGTGGTCGCTATATCTCTGCAGCACCGGGAGCAGAAGCAAAATACCGGAGTGCTTCAGGCACTTCCAGTCTGTTTAGTTCCAGCAGCCAGCTCTTCCCTCCTTCCCGACTTCGGTATAACAGGTCCGACATTATGCCTTCTGGCCGCAGTAGGCTGCTGGAAGATTTCAGAAACAACCGCTTCCCAAACCTGCAGCTGAGAGACTTGATTGGACATATAGTTGAGTTTTCTCAAGACCAGCATGGTTCCAGGTTCATACAACAGAAGCTAGAAAGAGCTACTCCAGCTGAGCGGCAGATGGTGTTTAATGAAATTCTCCAGGCAGCCTATCAACTAATGACGGATGTTTTTGGCAACTATGTCATACAGAAGTTTTTTGAGTTTGGGAGTTTGGATCAAAAATTAGCCCTGGCTACTCGTATTCGTGGTCATGTTCTGCCATTAGCCTTGCAGATGTATGGCTGTCGTGTTATTCAGAAAGCATTAGAGTCTATTTCTTCTGACCAGCAGAGTGAAATGGTAAAGGAGCTTGATGGGCATGTCCTTAAATGTGTAAAGGATCAGAATGGAAACCATGTTGTACAGAAATGTATTGAATGTGTTCAGCCACAGTCACTGCAGTTCATCATTGATGCTTTCAAAGGACAAGTATTTGTGCTTTCAACCCATCCTTACGGTTGCAGAGTTATTCAGCGTATCCTAGAGCATTGCACTGCAGAACAGACCTTACCGATCTTAGAAGAACTTCACCAACATACAGAGCAGTTGGTACAGGACCAGTATGGCAACTACGTCGTCCAGCACGTGCTGGAGCATGGCCGGCCTGAGGACAGGAGCAGGGTCGTTTCGGAAGTCCGGGGGGAGGTCCTCGCTCTGAGCCAGCACAAATTTGCCAGCAATGTGGTAGAAAAGTGTGTTACTCATGCCTCCCGTGCTGAGAGAGCGCTGCTGATTGACGAGGTCTGCTGCCAGAATGACGGCCCTCACAGTGCCTTATACACCATGATGAAGGACCAGTACGCCAACTACGTGGTCCAGAAGATGGTTGACATGGCCGAGCCTGCCCAGAGGAAAATAATCATGCATAAGATTCGACCTCACATAACTACTTTGCGCAAGTACACATACGGGAAGCATATACTGGCCAAGTTGGAGAAATATTATTTGAAAAATAGCCCAGACCTAGGGCCTATTGGAGGACCACCAAATGGAGTGCTGTAA

Related Sequences

XP_004839110.1 Protein

Pum2 PREDICTED: pumilio homolog 2 isoform X10 [Heterocephalus glaber]

Length: 1064 aa      View alignments
>XP_004839110.1
MNHDFQALALESRGMGELLPTKKFWDPDDPTKDGEKGVFLGGDEWRETAWGPSHHSVSQPIMVQRRSGQGFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADKLDSRFRKGTFGTRDAEADGPERGDQKGKASPFEEDQDRDLKQGEDGDPKLNGRGLPNGVDADGKDFNRTPGSRQASPTEVVERLGPSTNPPEGLGPLPNPTANKPLVEEFSHPETQNLDAMEQVGLDSLQFDYPGNQVPMDSSGAAVGLFDYNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGIFSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQQAAAAANSTASQQAASQAQPGQQQVLRAGGGQRPLTPNQGQQGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTANGLTSSTSGLFRPIGTQPQQQQQPPPSTNLQSNSFYGSSSLTSNSQSSSLFSHGPGQPGSTSLGFGSGSSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASGTSSLFSSSSQLFPPSRLRYNRSDIMPSGRSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVVQHVLEHGRPEDRSRVVSEVRGEVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMVDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGVL