Details from NCBI annotation

Gene Symbol Vsnl1
Gene Name visinin-like 1, transcript variant X2
Entrez Gene ID 101716324

Database interlinks

Part of NW_004624738.1 (Scaffold)

For more information consult the page for NW_004624738.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VSNL1 ENSCPOG00000000759 (Guinea pig)

Gene Details

visinin-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000678, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 94.24%
Ka/Ks Ratio 0.001 (Ka = 0.0005, Ks = 0.4851)

VSNL1 ENSG00000163032 (Human)

Gene Details

visinin-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000384719, Human)

Protein Percentage 100.0%
CDS Percentage 92.15%
Ka/Ks Ratio 0.001 (Ka = 0.0006, Ks = 0.5628)

Vsnl1 ENSMUSG00000054459 (Mouse)

Gene Details

visinin-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000072145, Mouse)

Protein Percentage 100.0%
CDS Percentage 93.89%
Ka/Ks Ratio 0.001 (Ka = 0.0004, Ks = 0.4244)

Vsnl1 ENSRNOG00000005345 (Rat)

Gene Details

visinin-like 1 (Vsnl1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007609, Rat)

Protein Percentage 100.0%
CDS Percentage 93.89%
Ka/Ks Ratio 0.001 (Ka = 0.0005, Ks = 0.4567)

Genome Location

Sequence Coding sequence

Length: 576 bp    Location: 513860..611190   Strand: +
>XM_004839023.1
ATGGGGAAGCAGAACAGCAAACTGGCCCCTGAGGTCATGGAGGACCTGGTGAAGAGCACGGAGTTCAACGAGCACGAGCTCAAGCAGTGGTACAAGGGGTTCCTCAAGGACTGCCCGAGCGGGAGGCTGAACCTCGAGGAGTTCCAGCAGCTCTACGTGAAGTTCTTCCCCTACGGAGATGCCTCCAAGTTCGCGCAGCACGCCTTCCGCACCTTCGACAAGAATGGCGACGGCACCATCGACTTCCGAGAGTTCATCTGCGCCCTGTCCATCACCTCCAGAGGCAGCTTCGAGCAGAAGCTCAACTGGGCCTTCAACATGTATGACCTGGACGGTGACGGCAAGATCACCCGTGTGGAGATGCTGGAGATCATCGAGGCTATCTACAAAATGGTGGGCACTGTGATCATGATGAAAATGAATGAGGATGGCCTCACGCCTGAGCAGCGAGTGGACAAGATTTTCAGCAAGATGGATAAGAACAAAGATGACCAGATTACACTGGACGAGTTCAAAGAAGCTGCAAAGAGCGACCCTTCCATCGTATTACTCCTGCAGTGCGACATTCAGAAATGA

Related Sequences

XP_004839080.1 Protein

Vsnl1 PREDICTED: visinin-like protein 1 isoform X2 [Heterocephalus glaber]

Length: 191 aa      View alignments
>XP_004839080.1
MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGDASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVEMLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKEAAKSDPSIVLLLQCDIQK