Details from NCBI annotation

Gene Symbol Vti1a
Gene Name vesicle transport through interaction with t-SNAREs 1A, transcript variant X2
Entrez Gene ID 101719787

Database interlinks

Part of NW_004624737.1 (Scaffold)

For more information consult the page for NW_004624737.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VTI1A ENSCPOG00000006164 (Guinea pig)

Gene Details

vesicle transport through interaction with t-SNAREs 1A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005560, Guinea pig)

Protein Percentage 96.77%
CDS Percentage 94.93%
Ka/Ks Ratio 0.08686 (Ka = 0.0149, Ks = 0.1715)

VTI1A ENSG00000151532 (Human)

Gene Details

vesicle transport through interaction with t-SNAREs 1A

External Links

Gene Match (Ensembl Protein ID: ENSP00000376792, Human)

Protein Percentage 96.31%
CDS Percentage 94.16%
Ka/Ks Ratio 0.09071 (Ka = 0.0174, Ks = 0.1922)

Vti1a ENSMUSG00000024983 (Mouse)

Gene Details

vesicle transport through interaction with t-SNAREs 1A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000093644, Mouse)

Protein Percentage 94.01%
CDS Percentage 90.17%
Ka/Ks Ratio 0.06524 (Ka = 0.0273, Ks = 0.4182)

Vti1a ENSRNOG00000042786 (Rat)

Gene Details

vesicle transport through interaction with t-SNAREs 1A (Vti1a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000058953, Rat)

Protein Percentage 97.33%
CDS Percentage 90.91%
Ka/Ks Ratio 0.02333 (Ka = 0.0116, Ks = 0.4954)

Genome Location

Sequence Coding sequence

Length: 654 bp    Location: 34021067..33660747   Strand: -
>XM_004838935.1
ATGTCCTCCGACTTCGAAGGCTATGAGCAGGACTTCGCCGTGCTCACCGCAGAGATCACCAGCAAGATTTCGAGGGTCCCTCGACTCCCGCCTGATGAGAAGAAACAAATGGTTGCAAATGTGGAGAAACAGCTTGAAGAGGCAAAAGAACTGCTTGAGCAGATGGATTTGGAAGTCAGAGAGATACCACCCCAAAGTCGAGGAATGTACAGCAACAGAATGAGAAGCTACAAGCAAGAAATGGGAAAACTCGAAACAGATTTTAAAAGGTCACGGATCGCCTACAGTGACGAAGTACGGAATGAGCTCCTAGGGGATGATGGGAATTCCTCAGAGAACCAGAGGGCACATCTGCTCGATAACACAGAGAGGCTGGAAAGGTCATCTCGGAGACTAGAGGCTGGATACCAAATAGCAGTGGAAACCGAACAAATTGGCCAAGAAATGTTGGAAAACCTCAGTCATGACAGAGAAAAGATACAGCGAGCACGTGAAAGACTTCGGGAAACAGATGCAGACTTGGGGAAAAGCTCCAGGATTCTGACAGGGATGTTGAGAAGAATCATCCAGAACCGCATCCTGCTTGTCATCTTGGGGATCGTCGTGGTCATCACCATCCTAACGACGATTGCTTTTTTCGTCAGAAGACAGTGA

Related Sequences

XP_004838992.1 Protein

Vti1a PREDICTED: vesicle transport through interaction with t-SNAREs homolog 1A isoform X2 [Heterocephalus glaber]

Length: 217 aa      View alignments
>XP_004838992.1
MSSDFEGYEQDFAVLTAEITSKISRVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVREIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDDGNSSENQRAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDADLGKSSRILTGMLRRIIQNRILLVILGIVVVITILTTIAFFVRRQ