Sequence details NCBI ID: XM_004838894.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Casp7
Gene Name caspase 7, apoptosis-related cysteine peptidase, transcript variant X3
Entrez Gene ID 101709568

Database interlinks

Part of NW_004624737.1 (Scaffold)

For more information consult the page for NW_004624737.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CASP7 ENSG00000165806 (Human)

Gene Details

caspase 7, apoptosis-related cysteine peptidase

External Links

Gene Match (Ensembl Protein ID: ENSP00000358327, Human)

Protein Percentage 85.15%
CDS Percentage 85.37%
Ka/Ks Ratio 0.15178 (Ka = 0.0808, Ks = 0.5322)

Casp7 ENSMUSG00000025076 (Mouse)

Gene Details

caspase 7

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026062, Mouse)

Protein Percentage 80.53%
CDS Percentage 81.19%
Ka/Ks Ratio 0.14298 (Ka = 0.1133, Ks = 0.7925)

Casp7 ENSRNOG00000016836 (Rat)

Gene Details

caspase 7 (Casp7), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022693, Rat)

Protein Percentage 82.51%
CDS Percentage 81.74%
Ka/Ks Ratio 0.12994 (Ka = 0.0972, Ks = 0.7483)

Genome Location

Sequence Coding sequence

Length: 912 bp    Location: 32888292..32853354   Strand: -
Raw sequence   
>XM_004838894.1
ATGGCAGATGATCAGGAACGTGTTGCAGAGCAGGGGGCTGGCGATTCCGCACCTCCAGATGCAGTTGATGCTAAGCCAGACCGGTCGTCATTCCTCTCATCACTCTTAACTAAGAAGAAGAAGAATGGCTCTACAGGCCCAGCCAGGACCCCCCGGGACCAGGTGCCTGTGTATCAGTATAACATGAATTTCGAGAAGGTGGGCAAGTGCGTCATAATAAACAACAAGAACTTCGACAAAGTGACAGGAATGGGTGTCCGAAATGGAACCGACAAAGATGCTGAGGCCCTTTTCAAGTGTTTCCGAAGCCTGGGTTTTGATGTGGTTGTTTATAATGACTGCACTTGTGCCAAGATGCAAGATCTGCTTAAACGAGCTTCTGAGGAGGACCACACCAATTCAGCCTGCTTCGCCTGCATCTTGTTAAGCCATGGAGAGGAAAATTTAATTTATGGAAAAGATGGCAGTACACCAATAAAGGATTTGACAGCCCATTTTCGGGGCGATCGATGCAAAACCCTTTTAGAGAAACCCAAACTCTTCTTCATTCAGGCTTGCCGAGGGACGGAGCTCGATGATGGGATCCAGGCTGACTCAGGCCCCATCGGTGACACCGATGTTAACCCACACTATAAGATCCCGGTGGAAGCTGACTTTCTCTTCGCTTATTCCACGGTTCCAGGCTATTACTCTTGGAGGAACCCGGGAACAGGTTCCTGGTTTGTGCAGGCTCTCTGCTCCATCCTGGAGAAGCATGGCAAAGAGCTGGAGATCATGCAGATCCTCACCAGGGTGAACTACAGCGTGGCCAGGCACTTTGAGTCCCAGTGTGATGACCCGCGTTTCAACGAGAAGAAGCAGATCCCATGCGTGGTCTCCATGCTCACCAAAGAACTCTACTTCTGCAAGTAA

Related Sequences

XP_004838951.1 Protein

Casp7 PREDICTED: caspase-7 isoform X3 [Heterocephalus glaber]

Length: 303 aa      
>XP_004838951.1
MADDQERVAEQGAGDSAPPDAVDAKPDRSSFLSSLLTKKKKNGSTGPARTPRDQVPVYQYNMNFEKVGKCVIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVVVYNDCTCAKMQDLLKRASEEDHTNSACFACILLSHGEENLIYGKDGSTPIKDLTAHFRGDRCKTLLEKPKLFFIQACRGTELDDGIQADSGPIGDTDVNPHYKIPVEADFLFAYSTVPGYYSWRNPGTGSWFVQALCSILEKHGKELEIMQILTRVNYSVARHFESQCDDPRFNEKKQIPCVVSMLTKELYFCK