Sequence details NCBI ID: XM_004838888.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Dclre1a
Gene Name DNA cross-link repair 1A
Entrez Gene ID 101708258

Database interlinks

Part of NW_004624737.1 (Scaffold)

For more information consult the page for NW_004624737.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

DCLRE1A ENSCPOG00000014212 (Guinea pig)

Gene Details

DNA cross-link repair 1A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012804, Guinea pig)

Protein Percentage 80.0%
CDS Percentage 87.96%
Ka/Ks Ratio 0.47678 (Ka = 0.1086, Ks = 0.2277)

DCLRE1A ENSG00000198924 (Human)

Gene Details

DNA cross-link repair 1A

External Links

Gene Match (Ensembl Protein ID: ENSP00000355185, Human)

Protein Percentage 74.1%
CDS Percentage 83.48%
Ka/Ks Ratio 0.43952 (Ka = 0.1542, Ks = 0.3508)

Dclre1a ENSMUSG00000025077 (Mouse)

Gene Details

DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000138290, Mouse)

Protein Percentage 65.98%
CDS Percentage 73.5%
Ka/Ks Ratio 0.31947 (Ka = 0.2416, Ks = 0.7563)

Dclre1a ENSRNOG00000026204 (Rat)

Gene Details

DNA cross-link repair 1A (Dclre1a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034952, Rat)

Protein Percentage 66.57%
CDS Percentage 72.91%
Ka/Ks Ratio 0.29237 (Ka = 0.2394, Ks = 0.8189)

Genome Location

Sequence Coding sequence

Length: 3120 bp    Location: 32761639..32779394   Strand: +
Raw sequence   
>XM_004838888.1
ATGTTAGAAGACACATTTTTGGAAGAAGACATCTGGGAATACAAATCTAAAAGAAAACCAAAACCAATACATCCAAATAATTGCTCTGAGAATATCCCAAAATCTGTTGAAAAACCAGCAGATAGAAAATACCAGTCAAAACAAAAAGGAAAAAAACCAAGAACTATAGAAGCTAAAGGGAAGGGGAAAGACCATGAAATGTGTCTTACAGAAAGCCAGAGTAGTGTATCTTCTAGTCAGAATTCGAGTTGTGGAGATGATATTCAGTTGTCCCAGGACAAAGAGACCACTCCAAGAAAGCACTGTAAAACTCACAAAAACAGACAAGTGTCCCCAAAGATACGTCCAATTTATGATGGACACTGTCCAAACTGCCAGATGCCTTTTTCCACATTGTTAGGTCAAACCCCTCGATGGCACGTTTTTGAATGTTTGGATTCTCCACCCATCTCTGATACAGAGTGTCCAGATGGTCTTCTGTGTACCTCAACAATTCCTTCTCATTATAAGAAATACACTCACCTTCTGCTTGCTCAAAGGAGAGCTAGTAACGATCCTGTTAGTGGCTTGTCACATGTGCCAGATGGGACATGTTTCAGTGAGACTAAGCCAGCCTTTTCTCCTACCCATGAGGAAAAATGGTCTCTGCATCAGAAACAAACTGAAAACTTAAAAAATGTTTCCAATGATCCCTTCTTGACGATACAGAATCTAAAAACATCTCAGCTTACAACTGAAACCAATAAAAAGATTTCCTCTTCTACAAATATTCATACTTCCCAGAAAGCTCTACAACCTAAAGAATTTGTTAAGAATGACAAACTGGTTGGAGTTGGTTTGCCTCTTATTGGGAAAGAATCAGTTGGCCAAAGCACCTCACAACACACAGATCTACCATTATCAGAAAATGGCTTCAGCAGCTGTGAAATCTCCTATTCTCCACTTCAAAGTGATGAGGAAACTTATGATATAAATGAAAAGCTGGATGATTCACAACAGAAACTATTTTTTACTGAAAGTTCTAAAGATGGTAGCCTAGAAGATGACGAAAGCTCTACTGTGTTTAAAAACCTCCGTGGTCATTTACTGAAGAATCCAGAGGAAAGCTACCCTAAAGTGAATAGCTTCTTAACTCAGGATAAGTACAGTGAAGGACTGTGTAAGTGCAATGCTCTAAATGATTCATTTCATTTTCTCTCCCAAGCTGAAAGTGATATCTCTTATGATGCAGCATTCACTGATTATTTTCTATTGTTTCCACCTGCATTAGCAGGGGAACGGCCTGCTTCTAATTGTCAGACCACTAAAGCAAAACCTGATGAGCCAGAATTTCAGTCATCTCAGTCAAATAAACAGAAACAGGCAATTGAAGAATCAGCTGTTTATAGTCAAGCTTCTCTCCCATTACTCAATTGTGAGTTGTCAAAATCTTTAGAAAGTCAAGGAGAACAGTGTCTTTCTTTGCATCCAAGCCAAAGTAAAATTAGAGAATTATCAAATGAGAACTTCTGTGCTAAGAACAATGCCAACTCAGCATGTGTCTGCAGAAAGATGTTAGATGGTGTGCCAGATGGTAAAGTTACACTTTTAAGTACAGGAAAATCTAGTGCATCTACTGCTGCTAAGTCTTCTAGTCCTAAAGGTAATGCAAGACATCTTAGCAAGGTAATGAAGCAAATGGATATAGGTGTATATTTTGGATTACCACCCAAGAGAAAAGAAGAGAAGTTGCCGGAGGAAAGTGCATTAGAAGTGATGAGCCTAAGTCCTAATGAAAAGAGGCCCCAGCAGTGCAAGAGGAAAGCAGAAAAATCTTTAAGTGATTTAGAATTTGATGCAAAGAATTTAGATGAGAGTCAGTCCTCCGTGGAACTGTCTGACGACAGGTCACAGCATCAAAGAAAGAGACTAAAAACGTCAAAATCACAGGAAGGGACACGTCAGAAGTCAGGACACTATATTAATACACAAGCAGAATCTGGGACAGTCAAGTTAAGTAAAGATAAAGTCTTCATAAAATCAGCTCCTGGCAGGCTGCAAAGAGGGAACACGAAGGTTTCACAGTCATCTAATGCAGGGGAATTAAGACAAAGGACCTGTCCATTCTATAAGAAAATACCTGGAACTGGCTTTACTGTCGATGCCTTTCAGTATGGCGAAGTTGAAGGCTGTACGGCATATTTTCTCACACATTTTCATTCTGATCACTATGCTGGGTTGTCCAAAAACTCTACCTTTCCAGTTTATTGTAGTGAGATAACTGGCAATCTGTTGAAGAGCAAGCTTCATGTGCAAGAACAATATATCCATCCGTTGCCAATGGACACTAAATGTATAGTGAATGGTGTCAAAGTCATTTTGCTTGATGCCAATCACTGTCCAGGTGCTGCTATGGTCCTTTTTTACCTTCCTAATGGGACTGTTGTATTACACACTGGAGACTTCAGAGCAGATCCCAGCATGGAGCGTTCTCTTCTTGCAGGCCAGAAAGTCCACACGCTGTACTTAGACACCACATATTGCAGCCCAGAATACACCTTTCCATCCCAGCAAGAGGTCATCCAGTTTGCCATCAACACTGCCTTTGAGGCTGTAACCCTAAACCCACGCGCTCTTATTATCTGTGGCACTTACTGTATCGGAAAAGAGAAAGTCTTCCTAGCCATTGCTGATGTTTTAGGTTCAAAAGTGGGCATGTCCAAGGAAAAATATGAAACATTACGCTGCCTCAATATATCAGAAATTAATTCCCTCATCACTACAGACATGTGCAATTCTTTGGTTCACCTTCTCCCAATGATGCAAATTAATTTTAAGAGTTTACAAAGTCATTTGAAGAAGTATGGTGAGAAATATGACCAGATTTTGGCTTTTCGACCTACAGGATGGACCCATTCTAATAAGTTAACTTGCATAGCAGATGTTACTCCTCAGACCAAAGGAAATATTTCAATATATGGCATTCCTTATAGTGAACACAGCAGCTACCTAGAAATGAAACGTTTTGTCCAATGGCTGAAGCCTCAGAAAATCATTCCTACTGTAAATATTGGCACCTGGAAATCTCGGAGCACAATGGAGAAATATTTTAAAGAATGGAAACTTGAAGCTGGATATTGA

Related Sequences

XP_004838945.1 Protein

Dclre1a PREDICTED: DNA cross-link repair 1A protein [Heterocephalus glaber]

Length: 1039 aa      View alignments
>XP_004838945.1
MLEDTFLEEDIWEYKSKRKPKPIHPNNCSENIPKSVEKPADRKYQSKQKGKKPRTIEAKGKGKDHEMCLTESQSSVSSSQNSSCGDDIQLSQDKETTPRKHCKTHKNRQVSPKIRPIYDGHCPNCQMPFSTLLGQTPRWHVFECLDSPPISDTECPDGLLCTSTIPSHYKKYTHLLLAQRRASNDPVSGLSHVPDGTCFSETKPAFSPTHEEKWSLHQKQTENLKNVSNDPFLTIQNLKTSQLTTETNKKISSSTNIHTSQKALQPKEFVKNDKLVGVGLPLIGKESVGQSTSQHTDLPLSENGFSSCEISYSPLQSDEETYDINEKLDDSQQKLFFTESSKDGSLEDDESSTVFKNLRGHLLKNPEESYPKVNSFLTQDKYSEGLCKCNALNDSFHFLSQAESDISYDAAFTDYFLLFPPALAGERPASNCQTTKAKPDEPEFQSSQSNKQKQAIEESAVYSQASLPLLNCELSKSLESQGEQCLSLHPSQSKIRELSNENFCAKNNANSACVCRKMLDGVPDGKVTLLSTGKSSASTAAKSSSPKGNARHLSKVMKQMDIGVYFGLPPKRKEEKLPEESALEVMSLSPNEKRPQQCKRKAEKSLSDLEFDAKNLDESQSSVELSDDRSQHQRKRLKTSKSQEGTRQKSGHYINTQAESGTVKLSKDKVFIKSAPGRLQRGNTKVSQSSNAGELRQRTCPFYKKIPGTGFTVDAFQYGEVEGCTAYFLTHFHSDHYAGLSKNSTFPVYCSEITGNLLKSKLHVQEQYIHPLPMDTKCIVNGVKVILLDANHCPGAAMVLFYLPNGTVVLHTGDFRADPSMERSLLAGQKVHTLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALIICGTYCIGKEKVFLAIADVLGSKVGMSKEKYETLRCLNISEINSLITTDMCNSLVHLLPMMQINFKSLQSHLKKYGEKYDQILAFRPTGWTHSNKLTCIADVTPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNIGTWKSRSTMEKYFKEWKLEAGY