Sequence details NCBI ID: XM_004838876.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Afap1l2
Gene Name actin filament associated protein 1-like 2, transcript variant X2
Entrez Gene ID 101704500

Database interlinks

Part of NW_004624737.1 (Scaffold)

For more information consult the page for NW_004624737.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AFAP1L2 ENSCPOG00000004200 (Guinea pig)

Gene Details

actin filament associated protein 1-like 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003786, Guinea pig)

Protein Percentage 90.86%
CDS Percentage 90.25%
Ka/Ks Ratio 0.10494 (Ka = 0.042, Ks = 0.4)

AFAP1L2 ENSG00000169129 (Human)

Gene Details

actin filament associated protein 1-like 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000303042, Human)

Protein Percentage 85.26%
CDS Percentage 85.42%
Ka/Ks Ratio 0.12152 (Ka = 0.0784, Ks = 0.645)

Afap1l2 ENSMUSG00000025083 (Mouse)

Gene Details

actin filament associated protein 1-like 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000107210, Mouse)

Protein Percentage 83.07%
CDS Percentage 84.09%
Ka/Ks Ratio 0.13209 (Ka = 0.092, Ks = 0.6966)

Afap1l2 ENSRNOG00000017164 (Rat)

Gene Details

Protein Afap1l2

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000064164, Rat)

Protein Percentage 84.29%
CDS Percentage 84.38%
Ka/Ks Ratio 0.12345 (Ka = 0.0866, Ks = 0.7018)

Genome Location

Sequence Coding sequence

Length: 2460 bp    Location: 32189382..32297104   Strand: +
Raw sequence   
>XM_004838876.1
ATGGAGCGGTACAAAGCCTTGGATCAGCTGCTGACAGAGCTGGATGACTTCCTCAGGATTCTGGACCAGGAGAACCTGAGCAGCACAGCGGTGGTGAAGAAGAGTGGCCTGGCAGAGCTCCTCCGGCTCTACACCAAGAGCAGCAGTTCTGATGAGGAGTACATTTACATGAACAAAGTCACAATCAACAAGCAACAGAACACCGAGTGTCAGGACAGAGTGTCCGAGGAGCAGGGTCCACTGACCAATGGGGAGCCCGTTCAGCCCTCCTCGGCCCCTCAGAAGAGTCTTCCAGACCTTCCACCGCCCAAGATGATTCCAGAACGGAAACAGCTCAGTGTCTCAAGGATTGAGTCTTCGGAGGGTTACTATGAAGAGGCTGAGCCATATGATACGTCTGTCAATGAGGATGGAGAGGCTGTGAGCAGCTCTTATGAATCCTACGATGAGGAGGAGAGCAGCAAGGGCAAGTCAGCCCCCTACCAGTGGCCCTCCCCAGAGGCCAGCATCGAGCTGATGCGGGACGCCCGCATCTGTGCTTTCCTGTGGCGCAAGAAGTGGCTGGGCCAGTGGGCCAAGCAGCTGTGTGTGATCAGGGACACCCGGCTCCTGTGCTACAAATCGTCCAAGGACCACAGCCCTCAGCTGGATGTGAACTTGTTGGGCAGCAGTGTTGTCCACAAGGAGAAGCAAGTACGGAAGCAGGAGCACAAGCTGAAGATCATGCCCATGAACGCGGATGTGATCGTGCTGGGCCTGCAGAGCAGGGACCAAGCCGAGCAGTGGCTCCGGGTCATCCAGGAGGTGAGCGGTCTGGCATCTGAGGGAACATCTGAGGGGAACCAGTACACGCCAGAGGCCCAGCGCCCGAACTGTCAGAAGCCAGATATAGCTGAGAAGTACCTGTCAGCCTCGGAGTACGGGAGCTCCATGGATGGCCACCCTGAGGTCTCAGAGATCAAAGACGTCAAGAAGAAGTGTTCTGCTGGCCTCAAGCTGAGCAACCTGATGAACCTGGGCAGGAAGAAATCCACCTCGCTGGAGCCCCCGGAGAGGCCCCTTGAGACCTCCAGTTACCTGAACGTGCTGGTGAACAGCCAGTGGAAGTCCCGCTGGTGCTCCGTCAGGGACAGTCACCTACATTTCTACCAGGACCGGAACCGGAGCAAGGCGGCCCAGCAGCCCCTCAGCCTGGTAGGCTGTGAAGTGGTCCCAGACCCAAGCCCTGACCACCTCTACTCCTTCCGCATCCTCCACAACGGGGAGGAGCTGGCCAAGCTCGAGGCCAAGTCCTCGGAAGAGATGGGCCACTGGCTAGGCCTCCTGCTGTCTGAGTCCGGCTCCAAGACAGACCCAGAGGAGTTCACCTACGACTACGTAGATGCTGAGCGGGTTTCCTGTATTGTTAATGCGGCCAAAAACTCCTTCTTGCTCATGCAGAGAAAGTTCTCAGAGCCCAACACTTACATCGATGGCCTGCCCACCCAGGCCCGCCAGGAAGAGCTCTATGACGACGTGGAGATGTCAGAGCTGACCCTGGCGGTGGAACCTGCCGAGGAAGCCACCCCCTCCGTGGATGCACTTAGTGAGAACGAGCCTGACAGACTGTACCTGGACCTCACGCCACTCAAGCCCTCCATGCACGGCCCCGGCCCTGGCCCCGGCAGTGTGCAGGCCCGGGGCTCTTCCCCCGTGTCACCGCAGCTGGATGACATGGCCAACGTCCTCCCTGCAGACCCTGGCCAAGCCCCAGAGGAGCTCCGCACAACATCTGCAGAAAGCCAAGAGGAGCAGAGGCAGCTGGCAAGCCAGGAGCCGGAGGAGCCTGCCCTGAGAATCGCCACTGTCAAGCTGCAGGCTGAGCAGCAGAGAATCTCTTTCCCATCCAACTGCCCTGACACCATGGCGGCTGCCCCAGCCAGCAGCAGCCCACCTGTGAAGGACAGGCTGCGGGTGACCAGTGCAGAGATCAAACTTGGCAAGAATCGGACAGAGGCCGAGGTGAAGCGGTACACAGAGGAGAAGGAAAGACTTGAGAAGATGAAGGAAGAGATCCGAGGCCACCTGGCTCAGCTCCGGAAAGAGAAGCGGGAGCTGAAAGAGACCCTGTTAAAATGCATAGACAAGGGCATCTTGGCCATCCTGGAGCAGAAGCTGAAGGAAATTGATGAGGAATGCCGGATCAAGGAGAGCAGGCGTGTGGACCTTGAGCTCAACATCATGGAGGTGAAGGACAACTTGAAGAAGGCTGAGGCTGGACCTGTGACACTGGGCACCACAGTAGACACTACACACCTGGACAACATGAGCCCCCGACCTAAAGCCACCGCCCCCACCCAAGACTGCACCCCAGTCAACTCTGCCACTGCGCTCAAGAATAGGCCTCTTTCCGTCATGGTCACAGGCAAAGGCACTGTCCTCCAGAAAGCCAAGGAATGGGAGAAGAAAGGAGCAAGTTAG

Related Sequences

XP_004838933.1 Protein

Afap1l2 PREDICTED: actin filament-associated protein 1-like 2 isoform X2 [Heterocephalus glaber]

Length: 819 aa      View alignments
>XP_004838933.1
MERYKALDQLLTELDDFLRILDQENLSSTAVVKKSGLAELLRLYTKSSSSDEEYIYMNKVTINKQQNTECQDRVSEEQGPLTNGEPVQPSSAPQKSLPDLPPPKMIPERKQLSVSRIESSEGYYEEAEPYDTSVNEDGEAVSSSYESYDEEESSKGKSAPYQWPSPEASIELMRDARICAFLWRKKWLGQWAKQLCVIRDTRLLCYKSSKDHSPQLDVNLLGSSVVHKEKQVRKQEHKLKIMPMNADVIVLGLQSRDQAEQWLRVIQEVSGLASEGTSEGNQYTPEAQRPNCQKPDIAEKYLSASEYGSSMDGHPEVSEIKDVKKKCSAGLKLSNLMNLGRKKSTSLEPPERPLETSSYLNVLVNSQWKSRWCSVRDSHLHFYQDRNRSKAAQQPLSLVGCEVVPDPSPDHLYSFRILHNGEELAKLEAKSSEEMGHWLGLLLSESGSKTDPEEFTYDYVDAERVSCIVNAAKNSFLLMQRKFSEPNTYIDGLPTQARQEELYDDVEMSELTLAVEPAEEATPSVDALSENEPDRLYLDLTPLKPSMHGPGPGPGSVQARGSSPVSPQLDDMANVLPADPGQAPEELRTTSAESQEEQRQLASQEPEEPALRIATVKLQAEQQRISFPSNCPDTMAAAPASSSPPVKDRLRVTSAEIKLGKNRTEAEVKRYTEEKERLEKMKEEIRGHLAQLRKEKRELKETLLKCIDKGILAILEQKLKEIDEECRIKESRRVDLELNIMEVKDNLKKAEAGPVTLGTTVDTTHLDNMSPRPKATAPTQDCTPVNSATALKNRPLSVMVTGKGTVLQKAKEWEKKGAS