Details from NCBI annotation

Gene Symbol Gfra1
Gene Name GDNF family receptor alpha 1, transcript variant X3
Entrez Gene ID 101699880

Database interlinks

Part of NW_004624737.1 (Scaffold)

For more information consult the page for NW_004624737.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GFRA1 ENSCPOG00000014933 (Guinea pig)

Gene Details

GDNF family receptor alpha 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013457, Guinea pig)

Protein Percentage 97.01%
CDS Percentage 92.88%
Ka/Ks Ratio 0.05121 (Ka = 0.0154, Ks = 0.3004)

GFRA1 ENSG00000151892 (Human)

Gene Details

GDNF family receptor alpha 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000347591, Human)

Protein Percentage 96.13%
CDS Percentage 92.62%
Ka/Ks Ratio 0.05711 (Ka = 0.0181, Ks = 0.3177)

Gfra1 ENSMUSG00000025089 (Mouse)

Gene Details

glial cell line derived neurotrophic factor family receptor alpha 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026076, Mouse)

Protein Percentage 92.95%
CDS Percentage 89.17%
Ka/Ks Ratio 0.07339 (Ka = 0.0342, Ks = 0.4657)

Gfra1 ENSRNOG00000017438 (Rat)

Gene Details

GDNF family receptor alpha 1 (Gfra1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023667, Rat)

Protein Percentage 92.31%
CDS Percentage 88.82%
Ka/Ks Ratio 0.08125 (Ka = 0.0391, Ks = 0.4811)

Genome Location

Sequence Coding sequence

Length: 1407 bp    Location: 30325516..30526486   Strand: +
>XM_004838864.1
ATGCTCCTGGCGACCCTGTACTTCGCGCTGCCGCTCCTGGACTTGCTCCTGTCCGCTGAGGTGAGCGGCGGGGACCGCCTGGACTGCGTGAAAGCCAGCGATCAGTGCCTGAAGGAGCAGAGCTGCAGCACCAAATACCGCACGCTGAGGCAGTGCGTGGCGGGTAAGGAGACCAACTTCAGCCTGGCATCTGGCCTCGAGGCCAAGGATGAGTGCCGCAGCGCCATGGAGGCCTTGAAGCAGAAGTCGCTCTACAACTGCCGCTGCAAGCGGGGCATGAAAAAGGAGAAGAACTGCCTGCGCATCTACTGGAGCATGTACCAGAGCCTGCAGGGAAATGATCTGCTGGAAGATTCCCCGTATGAACCAGTTAACAGCAGGTTGTCAGATATATTCCGGGTGGTTCCATTTATATCAGATGTTTTTCAGCAAGTGGAGCACATTCCCAAAGGGAACAACTGCCTGGATGCAGCTAAGGCCTGCAACCTCGATGACACCTGCAAGAAGTACAGGTCTGCGTACATCACCCCATGTACCACCAGCGTGTCCAACGATGTCTGCAACCGCCGCAAGTGCCACAAGGCCCTCCGCCAGTTCTTCGACAAGGTCCCAGCCAAGCATAGCTACGGAATGCTGTTCTGCTCCTGCCGGGATATTGCCTGCACAGAGCGGCGGCGACAGACCATCGTGCCTGTGTGCTCCTATGAAGAGCGGGAGAAGCCTAACTGCTTGAATTTGCAGGACTCCTGCAAGACGAATTACATCTGCAGATCTCGCCTTGCAGATTTTTTTACCAACTGCCAACCAGAGTCAAGGTCTGTCAGCAGCTGTCTGAAGGAGAACTACGCAGACTGCCTCCTGGCCTACTCGGGGCTGATCGGCACGGTCATGACCCCCAACTACATAGACTCTAGCAGCCTCAGCGTGGCCCCATGGTGTGACTGCTTCAACAGCGGGAATGACCTGGAAGAGTGCTTGAAGTTTTTGAATTTCTTCAAGGACAATAAATGTCTTAAAAATGCAATTCAAGCCTTTGGCAATGGCTCCGATGTGACTGTGTGGCAGCCAGCCCTCCCGGTGCAGACGACCACTGCCACCACCACCACAGCTTTTCGGGTCAAGAACAAGCCAGTGGGGCCAGCGGGCTCTGAGAATGAGATCCCCACACACGTTTTACCACCTTGTGCAAATTTACAGGCCCAGAAGCTGAAATCCAATGTGTCGGATAATACACAGCTCTGTCTTTCTGATAGCAATTATGAAAAGGATGGTCTCGCTGGTGCTTCCAGCCACATAACCACAAAATCAACGGCTGCTCCTCCAGGCTGTGGTCTGAGCCCACTGCTGGTTCTGGTGGTCACAGCTCTGTCTATCCTATTATCGTTATCTTTGGCAGAAACATCGTAG

Related Sequences

XP_004838921.1 Protein

Gfra1 PREDICTED: GDNF family receptor alpha-1 isoform X3 [Heterocephalus glaber]

Length: 468 aa      View alignments
>XP_004838921.1
MLLATLYFALPLLDLLLSAEVSGGDRLDCVKASDQCLKEQSCSTKYRTLRQCVAGKETNFSLASGLEAKDECRSAMEALKQKSLYNCRCKRGMKKEKNCLRIYWSMYQSLQGNDLLEDSPYEPVNSRLSDIFRVVPFISDVFQQVEHIPKGNNCLDAAKACNLDDTCKKYRSAYITPCTTSVSNDVCNRRKCHKALRQFFDKVPAKHSYGMLFCSCRDIACTERRRQTIVPVCSYEEREKPNCLNLQDSCKTNYICRSRLADFFTNCQPESRSVSSCLKENYADCLLAYSGLIGTVMTPNYIDSSSLSVAPWCDCFNSGNDLEECLKFLNFFKDNKCLKNAIQAFGNGSDVTVWQPALPVQTTTATTTTAFRVKNKPVGPAGSENEIPTHVLPPCANLQAQKLKSNVSDNTQLCLSDSNYEKDGLAGASSHITTKSTAAPPGCGLSPLLVLVVTALSILLSLSLAETS