Details from NCBI annotation

Gene Symbol Sec23ip
Gene Name SEC23 interacting protein, transcript variant X5
Entrez Gene ID 101713885

Database interlinks

Part of NW_004624737.1 (Scaffold)

For more information consult the page for NW_004624737.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SEC23IP ENSCPOG00000004752 (Guinea pig)

Gene Details

SEC23 interacting protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004284, Guinea pig)

Protein Percentage 92.04%
CDS Percentage 92.95%
Ka/Ks Ratio 0.23006 (Ka = 0.0412, Ks = 0.1789)

SEC23IP ENSG00000107651 (Human)

Gene Details

SEC23 interacting protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000358071, Human)

Protein Percentage 87.3%
CDS Percentage 88.97%
Ka/Ks Ratio 0.22147 (Ka = 0.0663, Ks = 0.2996)

Sec23ip ENSMUSG00000055319 (Mouse)

Gene Details

Sec23 interacting protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000035610, Mouse)

Protein Percentage 85.84%
CDS Percentage 84.91%
Ka/Ks Ratio 0.15192 (Ka = 0.0777, Ks = 0.5117)

Sec23ip ENSRNOG00000020411 (Rat)

Gene Details

SEC23 interacting protein (Sec23ip), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027665, Rat)

Protein Percentage 86.56%
CDS Percentage 85.42%
Ka/Ks Ratio 0.14834 (Ka = 0.0734, Ks = 0.4946)

Genome Location

Sequence Coding sequence

Length: 3003 bp    Location: 26923129..26880916   Strand: -
>XM_004838821.1
ATGACCGAGAGGAAACTTAATGGTGGCAGTGGCGGCGCTTCCACCTCTTTATCGTGTACTAACTTACTCTTCTCCTCCTCGGCCACGGGGTTCAGCTTCAACGTGCCCTTCATCCCAGTCACGCAAGCCGCCCCTGCCTCGGCCTCTCTTCTCTTGCCCGGAGAGGATTCCACAGATGTTGGTGAGGAGGACAGCTTCCTTGGTCAGACTTCTGTTCCCACATCCACCCCACAGACATTTAGTTACTTCTCTCAGGTATCGAGCAATAGTGATCCTTTTGGGAATATTGGACAGTCACCCTTAACAACTGCAGCAACATTGGTTGGACAATCAGCATTCTCCAACCCGCCAACTGCTCTCCCTTTTACAACTGAATCCCACGATGGGTTGACTACATTTCCACCATCTGTTTCAAAAGCTCAGTATGGTACTCCACCTTCCTCACAGATGGGAATAAATCCTTATTTGCCTTCTCAGCCAAGTGGTTTCCCTCCTTCAAATTTTGGGAGCCCACCGCAAGGAACCTCTCAACAAGGATATAATCCATATCGCCATACCCCTGTCAGCAGCAGGGCTAATCCCTACATCACACCTCCACAGCTGCAACAGTGCCAACCACCAGGCCATCTCACTCACCCTCCAACCTCTGGACCTCCAGTACAGATGTACCAGACGCCTCCAGCATCTTTGCTGCCGATTCCTCCTTCAGTACAGCCACCAACACAACAGCAAGCACTTGCTAAACCTGCAGGTCCCTCTGTGCAGGGGCCACCTCCTTTTGTACTTCAAAATCAGTATGAACCTGTCCAGCCCCACTGGTTTTACTGCAAGGAGGTAGAATACAAACAAGTATGGATGCCTTTCAGTGCACTGGACTCTTTGAATCTTGAAGAAGTCTATAATTCCGTCCAGCCAGACCCAGAGAGTGTGGTTCTCAGCACAGATGGAGGGCGATATGATGTCTACCTCTATGACCGAGTGAGGAAAGCAGTGTACTGGGAAGAGGAGCCAGCTGAAGTGAGGCGCTGTACTTGGTTTTACAAGGGGGACACAGACAGCAGATTCATTCCCTACACAGAGGACTTCAGTGAAAAACTAGAGGTTGAATATAAAAAAGCTGTAACCACAAATCAGTGGCACCGAAGATTAGAGTTTCCAAGTGGAGAGACTATTGTTATGCACAATCCAAAGGTTATTGTTCAGTTCCAGCCTTCCTCAGTGCCCGATGAGTGGGGAACCACACAGGATGGACAGACAAGGCCCAGGGTTGTAAAGCGTGGGGTTGATGACAGCCTTGATGAAATTCCCGATGGAGAAATGCCTCAGATTGACCATCTGGTGTTCATGGTACATGGCATTGGGCCGGTGTGTGACTTGCGCTTTAGAAGCATTATTGAATGTGTGGATGATTTTAGGGCGGTTTCTCTCAAATTGCTGCAGACACATTTCAAGAAGTCTTTAGAGGATGGGAAAATAAGCAGAGCCGAGTTCCTTCCTGTCCCCTGGCACAGTGCCTTGGGTGGGGGTGCCACCGGTGTTGACAGGAATATTAAGAAAATCACTTTGCCAAGTATTGGTCGGTTTCGTCACTTTACCAATGAAACTTTGCTAGATATTTTATTTTATAATAGCCCCACCTACTGTCAGGCAATTGTGGAGAAAGTGGGACTAGAGATGAACCGTCTACATGCACTCTTTTTGAGTCGGAACCCAGACTTCAAGGGAAGGGTCTCTGTTGCTGGTCACAGTTTAGGTTCTTTAATACTGTTTGACATCCTGTCTAATCAAAAAGATTTGAATTTTTCGAAGTCTCCTGGGCCTCTTGCTGTTGCTAATGGAGTTGTGAAGCAGCCTCAGTTTCAGGAGAAGCAGATAACTGAAGAGTCAAAGCTGACTTTCGATGAATCATGTGACCTTGATGTTGAAAATGAAGAAGTTCTAACTTTGCAAGCAACTCTGGAAGCGCTTAGCCTCTCTGAATATGTTAGCACTTTTGAAAAGGAAAAGATTGATACGGAATCTCTGCTTATGTGTACAGTTGATGACCTGAAGGAAATGGGGATACCTCTTGGACCAAGAAAGAAGATAGCCAACTTTGTAAAACTGAAAGCAGCCAAACTGGAGAGAGCAGCATCAGAAAAGAAGGCAGTTATGGCCTCTCCAGTGAAAGGACAGGAGGAGAACATTCCAAAAGCTAAAGCAGTGGCTTCTCTCCCCTCAGAAACCAATGAGTCAAAGAGGAAACTTCCAGTTGGTGCTTACGTATCTTCTGTACATGTTGATTATGAGTCCTTTGAAGTTGGCACGGGACAGGTTTCTGTTGTTCACAACTCATTAGACTTTGAACCAGAGATTTTCTTTGCTTTGGGATCTCCAATTGGTATGTTTCTCACTATTCGAGGAGTGGATAGGATTGATGAGAACTATAAGCTCCCTACATGTAAAGGATTCTTCAATATATATCATCCGCTCGACCCAGTGGCATATAGATTAGAACCTATGATTGTTCCAGATTTGGACCTAAAAGCAGTTCTTATTCCACATCACAAAGGCAGAAAAAGACTTCATTTAGAGCTGAAAGAAAGTCTCTCTCGTATGGGATCTGATTTGAAGCAGGGTTTTATTAGCTCTCTGAAAAGTGCTTGGCAGACACTGAATGAGTTTGCCCGCGCTCATACCTCTTCGACTCAGTTGCAAGAAGAATTGGAGAAAGTTGCCAATCAAATCAAAGAGGAAGAAGAAAAGCAAGTAGTTGAAGCAGAAAAGATTGTTGAAAGTCCAGATTTTTCCAAGGATGAGGACTACTTAGGAAAGGTTGGAATGTTAAATGGAGGCCGCCGAATTGATTACGTTCTTCAAGAAAAGCCAATAGAGAGTTTTAATGAATATCTTTTCGCTCTTCAGAGTCACTTATGCTATTGGGAATCTGAAGATACTGCCCTATTACTACTTAAAGAAATTTATCGAACGATGAACATTAGTCCAGAGCAGCCCCAGCATTGA

Related Sequences

XP_004838878.1 Protein

Sec23ip PREDICTED: SEC23-interacting protein isoform X5 [Heterocephalus glaber]

Length: 1000 aa      View alignments
>XP_004838878.1
MTERKLNGGSGGASTSLSCTNLLFSSSATGFSFNVPFIPVTQAAPASASLLLPGEDSTDVGEEDSFLGQTSVPTSTPQTFSYFSQVSSNSDPFGNIGQSPLTTAATLVGQSAFSNPPTALPFTTESHDGLTTFPPSVSKAQYGTPPSSQMGINPYLPSQPSGFPPSNFGSPPQGTSQQGYNPYRHTPVSSRANPYITPPQLQQCQPPGHLTHPPTSGPPVQMYQTPPASLLPIPPSVQPPTQQQALAKPAGPSVQGPPPFVLQNQYEPVQPHWFYCKEVEYKQVWMPFSALDSLNLEEVYNSVQPDPESVVLSTDGGRYDVYLYDRVRKAVYWEEEPAEVRRCTWFYKGDTDSRFIPYTEDFSEKLEVEYKKAVTTNQWHRRLEFPSGETIVMHNPKVIVQFQPSSVPDEWGTTQDGQTRPRVVKRGVDDSLDEIPDGEMPQIDHLVFMVHGIGPVCDLRFRSIIECVDDFRAVSLKLLQTHFKKSLEDGKISRAEFLPVPWHSALGGGATGVDRNIKKITLPSIGRFRHFTNETLLDILFYNSPTYCQAIVEKVGLEMNRLHALFLSRNPDFKGRVSVAGHSLGSLILFDILSNQKDLNFSKSPGPLAVANGVVKQPQFQEKQITEESKLTFDESCDLDVENEEVLTLQATLEALSLSEYVSTFEKEKIDTESLLMCTVDDLKEMGIPLGPRKKIANFVKLKAAKLERAASEKKAVMASPVKGQEENIPKAKAVASLPSETNESKRKLPVGAYVSSVHVDYESFEVGTGQVSVVHNSLDFEPEIFFALGSPIGMFLTIRGVDRIDENYKLPTCKGFFNIYHPLDPVAYRLEPMIVPDLDLKAVLIPHHKGRKRLHLELKESLSRMGSDLKQGFISSLKSAWQTLNEFARAHTSSTQLQEELEKVANQIKEEEEKQVVEAEKIVESPDFSKDEDYLGKVGMLNGGRRIDYVLQEKPIESFNEYLFALQSHLCYWESEDTALLLLKEIYRTMNISPEQPQH