Details from NCBI annotation

Gene Symbol Clrn3
Gene Name clarin 3, transcript variant X1
Entrez Gene ID 101716775

Database interlinks

Part of NW_004624737.1 (Scaffold)

For more information consult the page for NW_004624737.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLRN3 ENSCPOG00000014139 (Guinea pig)

Gene Details

clarin 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012737, Guinea pig)

Protein Percentage 79.56%
CDS Percentage 86.67%
Ka/Ks Ratio 0.6026 (Ka = 0.1309, Ks = 0.2173)

CLRN3 ENSG00000180745 (Human)

Gene Details

clarin 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000357660, Human)

Protein Percentage 76.99%
CDS Percentage 83.33%
Ka/Ks Ratio 0.35657 (Ka = 0.1367, Ks = 0.3834)

Clrn3 ENSMUSG00000050866 (Mouse)

Gene Details

clarin 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000056245, Mouse)

Protein Percentage 72.57%
CDS Percentage 77.43%
Ka/Ks Ratio 0.21311 (Ka = 0.1623, Ks = 0.7614)

Clrn3 ENSRNOG00000028288 (Rat)

Gene Details

clarin 3 (Clrn3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000035233, Rat)

Protein Percentage 73.45%
CDS Percentage 77.88%
Ka/Ks Ratio 0.2564 (Ka = 0.1721, Ks = 0.6712)

Genome Location

Sequence Coding sequence

Length: 681 bp    Location: 19140961..19159281   Strand: +
>XM_004838732.1
ATGCCAACAACACAGAAAACATTGATGTTCTCGTCCAGCTTTGTCACAAGCCTTGGGTCTGTCATCGTAATTTGTTCGATTCTTGCCACACAAGAATGGATCACCAGTACAATTACCATCACAGGCTCTTTTTCCAATGGTAGTGTTATCATCACTTACGGTCTTTTTCGTGGTAAGAGTACTCAAGAATTGACTCAAGGACTTCCAGAACTAGACAAAGATTTTGAAGTTTTAGGGATATTGGGCAATTCTTCCCCAAAATCTCTGCAATTGGTGACTATCCTGTTCCTGGTCATCAGTTTGATCACTTCGCTGCTGAGTTCTGTGTTTACCTTCTACAACAGCATCAGCAACCCCTACCAGACATTCCTGGGCCCAACTGGTGTGTACACCTGGAATGCAATCACCGCATTTTCCATTTTCCTGACAATGGTACTATTTGTGGGGAACACACAGTCTAATTATCTCTCTGAAGAAATTGTCCAGAGGCTTTATCCAACAATCACCATCAGAGGAACAACCCACAGTTATGGATACTCATTTTGGCTCATACTGCTTGTCATTCTTCTAAACATAGTCACCGTGATCATCATCTTTTTCTACCAGAAGGCCAGATACCAGCAGAAGCAGGAGGAGAGAAAGCCAATGGAATATGCTCCCAGGGATGGAATTTTATTCTGA

Related Sequences

XP_004838789.1 Protein

Clrn3 PREDICTED: clarin-3 isoform X1 [Heterocephalus glaber]

Length: 226 aa      View alignments
>XP_004838789.1
MPTTQKTLMFSSSFVTSLGSVIVICSILATQEWITSTITITGSFSNGSVIITYGLFRGKSTQELTQGLPELDKDFEVLGILGNSSPKSLQLVTILFLVISLITSLLSSVFTFYNSISNPYQTFLGPTGVYTWNAITAFSIFLTMVLFVGNTQSNYLSEEIVQRLYPTITIRGTTHSYGYSFWLILLVILLNIVTVIIIFFYQKARYQQKQEERKPMEYAPRDGILF