Details from NCBI annotation

Gene Symbol Ebf3
Gene Name early B-cell factor 3, transcript variant X5
Entrez Gene ID 101713032

Database interlinks

Part of NW_004624737.1 (Scaffold)

For more information consult the page for NW_004624737.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

EBF3 ENSCPOG00000005096 (Guinea pig)

Gene Details

early B-cell factor 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004584, Guinea pig)

Protein Percentage 97.35%
CDS Percentage 95.14%
Ka/Ks Ratio 0.1018 (Ka = 0.0175, Ks = 0.1715)

EBF3 ENSG00000108001 (Human)

Gene Details

early B-cell factor 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000357637, Human)

Protein Percentage 97.92%
CDS Percentage 93.43%
Ka/Ks Ratio 0.04254 (Ka = 0.0126, Ks = 0.2973)

Ebf3 ENSMUSG00000010476 (Mouse)

Gene Details

early B cell factor 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000101724, Mouse)

Protein Percentage 89.07%
CDS Percentage 87.22%
Ka/Ks Ratio 0.1874 (Ka = 0.0777, Ks = 0.4145)

Ebf3 ENSRNOG00000016102 (Rat)

Gene Details

early B-cell factor 3 (Ebf3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021702, Rat)

Protein Percentage 89.07%
CDS Percentage 86.92%
Ka/Ks Ratio 0.17904 (Ka = 0.0779, Ks = 0.435)

Genome Location

Sequence Coding sequence

Length: 1686 bp    Location: 17078799..17199615   Strand: +
>XM_004838724.1
ATGAATCCGGTGCGCTCGTGGATGCACACGGCAGGCGTGGTGGACGCCAACACGGCAGCCCAGAGTGGCGTGGGGCTGGCGCGGGCGCACTTCGAGAAGCAGCCGCCTTCCAACCTCCGGAAATCCAATTTCTTTCACTTCGTGCTGGCGCTCTACGACAGGCAGGGGCAGCCGGTGGAGATTGAAAGGACCGCTTTTGTGGACTTTGTGGAAAAAGAGAAAGAGCCAAACAACGAGAAAACCAACAATGGCATCCACTATAAGCTCCAGCTACTGTACAGTAACGGAGTCAGAACAGAGCAGGATCTGTATGTTCGCCTCATAGATTCAATGACCAAACAGGCCATCGTCTACGAGGGCCAAGACAAGAACCCGGAGATGTGCCGCGTGTTGCTGACCCACGAGATCATGTGCAGCCGGTGCTGTGACAAGAAAAGTTGTGGCAATAGAAACGAAACGCCCTCAGACCCTGTAATCATTGACAGATTCTTCCTAAAGTTTTTCCTCAAGTGCAATCAAAACTGCCTGAAGAATGCAGGCAACCCTCGGGATATGCGGAGGTTCCAGGTTGTTGTATCGACAACAGTCAACGTGGACGGCCACGTGCTGGCTGTGTCCGACAACATGTTTGTGCACAACAATTCCAAACACGGGAGGCGGGCCCGCCGCCTAGACCCGTCAGAAGCCACTCCGTGCATCAAGGCCATCAGTCCCAGTGAAGGCTGGACCACGGGGGGCGCCACTGTCATCATAATTGGAGACAACTTCTTCGACGGTCTACAAGTTGTGTTTGGAACCATGTTGGTGTGGAGTGAGCTGATAACTCCCCACGCCATCCGAGTGCAGACCCCGCCGCGACACATCCCTGGAGTTGTTGAAGTCACCCTCTCGTACAAGTCCAAGCAGTTCTGCAAAGGCGCTCCTGGGCGCTTCGTCTACACCGCCCTTAATGAACCAACCATAGATTACGGCTTCCAGAGGTTGCAGAAAGTGATCCCCAGACATCCGGGTGATCCTGAAAGATTACCCAAGGAAGTATTACTCAAGAGGGCGGCCGACCTGGTGGAAGCCTTGTATGGAATGCCTCACAATAACCAGGAGATCATCCTGAAGCGAGCAGCTGACATCGCTGAGGCATTGTACAGTGTCCCCCGCAATCACAACCAGATACCCACCCTGGGCAACACTCCAGCACACACCGGGATGATGGGTGTGAACTCCTTCAGCAGCCAGCTAGCCGTCAACGTGTCAGAGACATCGCAAGCCAATGACCAAGTCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAGGATACGTCCCCAGCAGTACTCCCCAGCAGTCCAATTACAACACAGTCAGCACTAGCATGAATGGATATGGAAGTGGCGCCATGGCCAATCTAGGGGTCCCTGGCTCGCCTGGATTTCTTAATGGCTCCTCCGCTAACTCTCCCTACGGCATGAAACAGAAGAGCGCCTTTGCGCCCGTGGTCCGGCCCCAAGCCTCGCCTCCTCCTTCCTGCACCAGCGCCAATGGGAATGGACTGCAAGGCTCTCTGCTGGGTGCTGAGGACGTAGCCGTGGAGAAGACAAACTGGCCCTTTTGTGAAGTCGGTGGCATATTTCACTTTGATGAACTAATGCTCAAAAAAGGAACTGGAAAGCTATGTCTGGGCTGGTAG

Related Sequences

XP_004838781.1 Protein

Ebf3 PREDICTED: transcription factor COE3 isoform X5 [Heterocephalus glaber]

Length: 561 aa      View alignments
>XP_004838781.1
MNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPSNLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGVRTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANSPYGMKQKSAFAPVVRPQASPPPSCTSANGNGLQGSLLGAEDVAVEKTNWPFCEVGGIFHFDELMLKKGTGKLCLGW