Sequence details NCBI ID: XM_004838590.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Mms19
Gene Name MMS19 nucleotide excision repair homolog (S. cerevisiae)
Entrez Gene ID 101726454

Database interlinks

Part of NW_004624737.1 (Scaffold)

For more information consult the page for NW_004624737.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MMS19 ENSCPOG00000006715 (Guinea pig)

Gene Details

MMS19 nucleotide excision repair homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006050, Guinea pig)

Protein Percentage 94.07%
CDS Percentage 93.13%
Ka/Ks Ratio 0.18181 (Ka = 0.0319, Ks = 0.1756)

MMS19 ENSG00000155229 (Human)

Gene Details

MMS19 nucleotide excision repair homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000412698, Human)

Protein Percentage 91.45%
CDS Percentage 90.35%
Ka/Ks Ratio 0.19787 (Ka = 0.0497, Ks = 0.2513)

Mms19 ENSMUSG00000025159 (Mouse)

Gene Details

MMS19 (MET18 S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000130900, Mouse)

Protein Percentage 88.63%
CDS Percentage 85.91%
Ka/Ks Ratio 0.14145 (Ka = 0.0644, Ks = 0.4552)

Mms19l ENSRNOG00000046769 (Rat)

Gene Details

MMS19-like (MET18 homolog, S. cerevisiae) (Mms19l), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065140, Rat)

Protein Percentage 87.46%
CDS Percentage 85.29%
Ka/Ks Ratio 0.15815 (Ka = 0.0725, Ks = 0.4582)

Genome Location

Sequence Coding sequence

Length: 3090 bp    Location: 9150146..9117769   Strand: -
Raw sequence   
>XM_004838590.1
ATGGCCGCCGCCGCTCTGGAGGCGGGAGTGCCTACAGGCGTTCTGTGGGGGCTCGTGCAAGACTTCGTCGTGGGTCAGCAGGAAGGTCCCGCTGACCAGGTGGCTGCAGATGTGAAATCCGGCAGCTATACAGTGTTACAAGTGGTTGAAGCCCTTGGGTCCTCTCTGGAGAATCCTGAACCCCAGACTCGGGCACGGGGTATCCAGCTTTTGTCACAGGTGCTGCTCCAGTGTCACTCCTTGCTCCTGGAGAAGGAAGTGGTTCACCTGATCCTGTTCTATGAGAACCGGTTGAAAGACCATCATCTTGTGATCCCATCTGTCCTGCAGGGTTTGAGGGCACTTAGCCTTTGTGTGGGTCTGCCGCCAGGACTTGCTGTCTCTGTGCTTAAAGCCATCTTCCAAGAGGTACATGTACAGTCTCTGCTGCAGGTGGACCGACACACAGTCTACAATATCATCACCAACTTCATGCGAACTCGAGAAGAAGAGCTAAAAGGTCTAGGAGCTGACTTCACATTTGGCTTCATCCAGGTGATGGATGGAGAAAAAGATCCCCGTAACCTTCTGGTGGCTTTCCGCATTGTCCATGACCTCATCTCTAGGGATTACAGCTTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCTGTTATTTCCCTATTGATTTTACTCCTCCACCTAATGATCCCCATGGTATCCAGAGAGAAGATCTCATCCTGAGTCTTCGAGTGGTGCTGGCTTCTACGCCACAGTTTGCTGAGTTCCTACTGCCCCTGTTGATTGAGAAAGTAGATTCTGAGATTCTGAGTGCCAAGCTGGATTCACTGCAGACTCTGAATGCTTGCTGTGCTGTGTATGGGCAAAAAGAACTGAAGGACTTCCTTCCCAGCCTTTGGGCTTCTATCCGCAGAGAGGTGTTCCAGACAGCAAGTGAGCAGGTGGAGGCAGAAGGCCTGGCAGCCCTTCACTCCCTGACTGCGTGTTTGTCTCGCTCTGTGCTGAGTGCTGATGCAGAGGACCTTCTTGACACCTTCCTTAGCAACATTCTACAGGACTGCAGGCACCATCTGTGTGAACCGGACATGAAACTGGTATGGCCTAGTGCCAAGCTGTTGCAGGCAGCTACAGGTGCATCTGCCCGGGCCTGTGACCACATTACCAGCAACGTACTGCCTTTACTTCTGGAACAATTTCACAAGCACAGTCAGAGCAACCAGAGGCGGACAATCCTTGAAATGATCCTGGGTTTCTTGAAGCTGCAGCAGAGGTGGAGCTATGAAGATAAAGATGAAAGAACTCTGAGTGACTTCAAGGACCAGCTGTGTTCATTGGTATTCATGGCCCTAACAGACTCCAGCGCCCAGCTTCAGCTTGTTGGCATCCGTGCAATCACAGTCTTGGGTGCCCAGCCAGATTTCCTATCTTCTGAGGACTTGGAACAGGCAGTGGGTCACCTGTACAGACTGAGCTTCCAGGAGGAGGATTCCCAGAGCTGCAGGGTGGCAGCACTGGAAGCCTCAGGAGCCCTGGCCACTCTCTACCCTGTGGCCTTCAGCAGCCATCTGGTACCCAAGCTTGCTGAGGAGCTGCACAGAGGGAAGTCTAACTTAGCTAGAGGAGATGGGTCAACCAAATGCTCACAGCATCTGCGCTGTCTGCAAGCTTTGTCAGCTGTTTCAACACATCCCAGCATCGTCAAGGAGACACTGCCTCTGCTGCTGGAGCATCTCTGGAGGATGAACAAAGGGAATGTGGTTACAGGACCCAGTGACATTATTGCTGTCTGTCAGAGTCTCCAGCAGGTGGCAGAAAAATGCCAGCAAGACCCTGAGAGCTGCTGGTATTTCCATCAGACAGCTGTACCTTGGTTGCTTGCTTTGGCTGTTCAGGCTTCCATGCCAGAGAAGGAGCCCTCTGTTTTAAGAGAAGTGCTGTTGGAGGATGCGGTCTTGGCTGCCATGGTGTCTGTCATTGGCACTGCCACTACTCACTTAACCTCTGAGTTAGCAGCCCAGAGTGTCACCCGCATAGTGTCCCTCTTCTTGGACGGCAACACTTCCTTTCTGCCTGAAAACAGCTTCCCAAGCAGATTCCAGCCATTCCAGGATGGCTCCTCGGGCCAGAGGCGGCTGGTTGCACTGCTTATGGCCTTTGTGTGTTCCCTGCCTCAAAATGTGGAAATCCCTCAGCTGAACCAACTCATGAGGGAGCTTTTGGAACTGAGCTGCTGCCACAGCTGCCCCTTCTCCTCCACTGCTGCTGCCAAGTGCTTTGCAGGACTCCTCAACAAACTCCCTGCAGGGCAGCAGCTGGATGAATTCCTGCAGCTGGCTGTGGATGCAGTGGACAGTGGCCTGGGCTCTGGGCCCTTTCGTCATCAGGCCTTCACACTGCTGCTCTGGGTAACAAAGGCCCTAGTACTCAGATACCATCCTCTCAACTCCTCCCTTACAGCTCGGCTTATGGGCCTCCTGAGTGACCCAGAATTAGGCCCAGCAGCAGCTGATGGCTTTTCTCTGCTCATGTCTGACTGCACTGATGTGCTGACTCGAGCTAGCCATGCTGAAGTGCGGATCATGTTTCGCCAGCGATTTTTCACAGACAATGTGCCTGCTTTGGTCCAAGGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAACTACCTGAAGGGTCTGTCGCATGTACTCCACAGGCTGCCCAAGCCCGTGCTCTTGCCAGAACTGCCCACACTTCTTTCCCTGCTCCTGGAGGCCCTGTCCTGCTCTGACTCTGTGGTTCAGCTCTCTACCCTCAGCTGCCTTCAGCCTCTTCTACTGGAAGCACCTCAGGTCATGAGTCTTCACGTTGACATGCTGGTCACCAAGTTTCTGAACCTCAGCTCCAGCCCTTCCATGGCTGTCCGGATTGCTGCACTGCAGTGTATGCATGCTCTTACTCGCTTGCCCACTCCTGTGTTGCTGCCATATAAACCACAGGTGATCCGGGCATTAGCCAAGCCCCTTGACGACAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTCAGCCAGGGGAGAGTGGTTTCTGCTAGGGAGCCCTGGCAGCTGA

Related Sequences

XP_004838647.1 Protein

Mms19 PREDICTED: MMS19 nucleotide excision repair protein homolog [Heterocephalus glaber]

Length: 1029 aa      View alignments
>XP_004838647.1
MAAAALEAGVPTGVLWGLVQDFVVGQQEGPADQVAADVKSGSYTVLQVVEALGSSLENPEPQTRARGIQLLSQVLLQCHSLLLEKEVVHLILFYENRLKDHHLVIPSVLQGLRALSLCVGLPPGLAVSVLKAIFQEVHVQSLLQVDRHTVYNIITNFMRTREEELKGLGADFTFGFIQVMDGEKDPRNLLVAFRIVHDLISRDYSLGPFVEELFEVTSCYFPIDFTPPPNDPHGIQREDLILSLRVVLASTPQFAEFLLPLLIEKVDSEILSAKLDSLQTLNACCAVYGQKELKDFLPSLWASIRREVFQTASEQVEAEGLAALHSLTACLSRSVLSADAEDLLDTFLSNILQDCRHHLCEPDMKLVWPSAKLLQAATGASARACDHITSNVLPLLLEQFHKHSQSNQRRTILEMILGFLKLQQRWSYEDKDERTLSDFKDQLCSLVFMALTDSSAQLQLVGIRAITVLGAQPDFLSSEDLEQAVGHLYRLSFQEEDSQSCRVAALEASGALATLYPVAFSSHLVPKLAEELHRGKSNLARGDGSTKCSQHLRCLQALSAVSTHPSIVKETLPLLLEHLWRMNKGNVVTGPSDIIAVCQSLQQVAEKCQQDPESCWYFHQTAVPWLLALAVQASMPEKEPSVLREVLLEDAVLAAMVSVIGTATTHLTSELAAQSVTRIVSLFLDGNTSFLPENSFPSRFQPFQDGSSGQRRLVALLMAFVCSLPQNVEIPQLNQLMRELLELSCCHSCPFSSTAAAKCFAGLLNKLPAGQQLDEFLQLAVDAVDSGLGSGPFRHQAFTLLLWVTKALVLRYHPLNSSLTARLMGLLSDPELGPAAADGFSLLMSDCTDVLTRASHAEVRIMFRQRFFTDNVPALVQGFHAAPQDVKPNYLKGLSHVLHRLPKPVLLPELPTLLSLLLEALSCSDSVVQLSTLSCLQPLLLEAPQVMSLHVDMLVTKFLNLSSSPSMAVRIAALQCMHALTRLPTPVLLPYKPQVIRALAKPLDDKKRLVRKEAVSARGEWFLLGSPGS