Details from NCBI annotation

Gene Symbol Opalin
Gene Name oligodendrocytic myelin paranodal and inner loop protein
Entrez Gene ID 101719659

Database interlinks

Part of NW_004624737.1 (Scaffold)

For more information consult the page for NW_004624737.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

OPALIN ENSCPOG00000009961 (Guinea pig)

Gene Details

oligodendrocytic myelin paranodal and inner loop protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008939, Guinea pig)

Protein Percentage 84.17%
CDS Percentage 86.33%
Ka/Ks Ratio 0.3837 (Ka = 0.111, Ks = 0.2893)

OPALIN ENSG00000197430 (Human)

Gene Details

oligodendrocytic myelin paranodal and inner loop protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000360214, Human)

Protein Percentage 80.85%
CDS Percentage 84.87%
Ka/Ks Ratio 0.31494 (Ka = 0.1144, Ks = 0.3632)

Opalin ENSMUSG00000050121 (Mouse)

Gene Details

oligodendrocytic myelin paranodal and inner loop protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000084422, Mouse)

Protein Percentage 76.22%
CDS Percentage 79.25%
Ka/Ks Ratio 0.21556 (Ka = 0.1398, Ks = 0.6483)

Opalin ENSRNOG00000022386 (Rat)

Gene Details

oligodendrocytic myelin paranodal and inner loop protein (Opalin), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000029913, Rat)

Protein Percentage 77.46%
CDS Percentage 79.11%
Ka/Ks Ratio 0.21973 (Ka = 0.1419, Ks = 0.6458)

Genome Location

Sequence Coding sequence

Length: 444 bp    Location: 7799655..7781837   Strand: -
>XM_004838576.1
ATGAGTTTTTCACTAAACTTCACACTGCCAGCTAATATGACTTCCTTTCCAGTTGTTACAGGTGGGAATGAAGCAGACTGTGGGCCCTCTGTTGGATTAGCAGCAGGCATCCCATCTTTGGTGGCCACAGCCCTCCTGGTAGCCTTACTATTTACTTTTGTTCACCGAAGAAGAAGAAGAAGAAGAAGCAGAAGCAGTGAGTCTGCTGAGGAAACTGAAAGACCATGTGAAATTTCAGAAATCTATGACAAACCCAAGATATCTGAAAATCCTAGGAGGTCACCCACACATATGAAGAATACTACAGGAGCACAAGAAGCCCACATATATGTGAAGACTGTAGCAGGAAGCGAGCAGCCCCTGCCTGACACTTACCATCCTCCTGAAGAAATAGAGAGAAGGAGGGGACTGTGGTGGCTTATACCTAGACTAAGCCTGGAATGA

Related Sequences

XP_004838633.1 Protein

Opalin PREDICTED: opalin [Heterocephalus glaber]

Length: 147 aa      View alignments
>XP_004838633.1
MSFSLNFTLPANMTSFPVVTGGNEADCGPSVGLAAGIPSLVATALLVALLFTFVHRRRRRRRSRSSESAEETERPCEISEIYDKPKISENPRRSPTHMKNTTGAQEAHIYVKTVAGSEQPLPDTYHPPEEIERRRGLWWLIPRLSLE