Details from NCBI annotation

Gene Symbol Lgi1
Gene Name leucine-rich, glioma inactivated 1, transcript variant X1
Entrez Gene ID 101703526

Database interlinks

Part of NW_004624737.1 (Scaffold)

For more information consult the page for NW_004624737.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LGI1 ENSCPOG00000008822 (Guinea pig)

Gene Details

leucine-rich, glioma inactivated 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007919, Guinea pig)

Protein Percentage 98.74%
CDS Percentage 97.37%
Ka/Ks Ratio 0.07502 (Ka = 0.0062, Ks = 0.0821)

LGI1 ENSG00000108231 (Human)

Gene Details

leucine-rich, glioma inactivated 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000360472, Human)

Protein Percentage 98.38%
CDS Percentage 95.81%
Ka/Ks Ratio 0.04886 (Ka = 0.0075, Ks = 0.1538)

Lgi1 ENSMUSG00000067242 (Mouse)

Gene Details

leucine-rich repeat LGI family, member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000084507, Mouse)

Protein Percentage 96.41%
CDS Percentage 91.62%
Ka/Ks Ratio 0.05 (Ka = 0.017, Ks = 0.3392)

Lgi1 ENSRNOG00000014758 (Rat)

Gene Details

leucine-rich, glioma inactivated 1 (Lgi1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020411, Rat)

Protein Percentage 96.41%
CDS Percentage 91.44%
Ka/Ks Ratio 0.04931 (Ka = 0.017, Ks = 0.3457)

Genome Location

Sequence Coding sequence

Length: 1674 bp    Location: 5024708..5060220   Strand: +
>XM_004838530.1
ATGGAATCAGAAAGAAGCAAAAGGATGGGAAATGCCTGCATCCCCCTGAAAAGAATTGCTTATTGCCTATGTCTCTTATCTGCGCTTTTGCTGACTGAGGGGAAGAAACCAACGAAGCCAAAATGCCCTGCCGTGTGTACTTGTACCAAAGATAATGCTTTATGTGAGAATGCCAGATCCATTCCACGCACCGTTCCTCCTGATGTTATCTCATTATCCTTTGTGAGATCTGGTTTTACTGAAATCTCAGAAGGGAGTTTTTTATTCACACCATCGCTGCAGCTCTTGTTATTCACATCAAACTCCTTTGATGTGATCAGTGATGATGCCTTTATTGGTCTTCCACATCTAGAGTATCTATTCATAGAAAACAACAACATCAAGTCCATTTCAAGACATACTTTCCGGGGACTAAAGTCTTTAATTCACCTGAGCCTCGCAAACAACAATCTCCAGACACTCCCAAAAGATATTTTCAAAGGCCTGGATTCTTTAACAAATGTGGACCTTAGAGGGAATTCATTTAATTGTGATTGTAAATTGAAGTGGCTGGTGGAATGGCTTAGCCACACCAATGCAACTGTTGAAGACATCTACTGTGAAGGCCCCCCAGAATACAAGAAGCGCAAAATCAATAGCCTTTCATCCAAGGATTTTGACTGCATCATTACAGAATTTGCAAAATCTCAAGACCTGCCTTATCAATCACTGTCCATAGACACTTTTTCTTATATGAATGATGAGTATGTTGTCATTGCTCAGCCTTTTACTGGAAAATGCATTTTCCTTGAATGGGACCATGTAGAAAAGACTTTCCGGAATTATGACAACATTACAGGCACGTCCACTGTAGTGTGCAAGCCTATAGTCATTGAAACTCAGCTCTATGTTATTGTGGCTCAGCTGTTTGGTGGCTCTCATATCTATAAGCGAGATGGTTTTGCAAACAAATTCATAAAAATTCAGGATATTGAAATTCTCAAAATCCGAAAACCCAACGACATAGAAACATTCAAGATTGAAAACAACTGGTACTTTATTGTTGCTGATAGTTCAAAAGCTGGTTTTACTACCATTTATAAATGGAACGGAAATGGATTCTACTCCCATCAATCTTTACATGCCTGGTACAGGGACACTGATGTGGAATATTTAGAAATAGCCAAAACACCTCTGACACTTAGAACACCTCATTTAATTCTGTCCAGTAGTTCCCAGCGTCCTGTAATTTATCAGTGGAACAAAGCAACACAATTATTCACTAACCAAACTGATATTCCTAACATGGAAGATGTCTATGCAGTAAAGCACTTCTCAGTGAAAGGTGACGTATACATTTGCTTGACAAGATTCATTGGTGATTCCAAAGTCATGAAATGGGGAGGCTCCTCATTCCAGGATATTCAGAGGATGCCATCGAGAGGATCTATGGTGTTCCAGCCTCTTCAGATAAATAATTACCAATATGCAATTCTTGGAAGTGATTACTCCTTTACTCAAGTGTATAACTGGGATGCAGAGAAAGCCAAATTTGTGAAATTTCAGGAATTAAATGTTCAGGCACCAAGATCATTCACACATGTGTCCATTAATAAGCGTAATTTTCTTTTTGCTTCCAGTTTTAAGGGAAACACACAGATTTACAAACATGTGATAGTTGATTTAAGCGCATGA

Related Sequences

XP_004838587.1 Protein

Lgi1 PREDICTED: leucine-rich glioma-inactivated protein 1 isoform X1 [Heterocephalus glaber]

Length: 557 aa      View alignments
>XP_004838587.1
MESERSKRMGNACIPLKRIAYCLCLLSALLLTEGKKPTKPKCPAVCTCTKDNALCENARSIPRTVPPDVISLSFVRSGFTEISEGSFLFTPSLQLLLFTSNSFDVISDDAFIGLPHLEYLFIENNNIKSISRHTFRGLKSLIHLSLANNNLQTLPKDIFKGLDSLTNVDLRGNSFNCDCKLKWLVEWLSHTNATVEDIYCEGPPEYKKRKINSLSSKDFDCIITEFAKSQDLPYQSLSIDTFSYMNDEYVVIAQPFTGKCIFLEWDHVEKTFRNYDNITGTSTVVCKPIVIETQLYVIVAQLFGGSHIYKRDGFANKFIKIQDIEILKIRKPNDIETFKIENNWYFIVADSSKAGFTTIYKWNGNGFYSHQSLHAWYRDTDVEYLEIAKTPLTLRTPHLILSSSSQRPVIYQWNKATQLFTNQTDIPNMEDVYAVKHFSVKGDVYICLTRFIGDSKVMKWGGSSFQDIQRMPSRGSMVFQPLQINNYQYAILGSDYSFTQVYNWDAEKAKFVKFQELNVQAPRSFTHVSINKRNFLFASSFKGNTQIYKHVIVDLSA