Details from NCBI annotation

Gene Symbol Arid3c
Gene Name AT rich interactive domain 3C (BRIGHT-like), transcript variant X1
Entrez Gene ID 101708010

Database interlinks

Part of NW_004624736.1 (Scaffold)

For more information consult the page for NW_004624736.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARID3C ENSCPOG00000001541 (Guinea pig)

Gene Details

AT rich interactive domain 3C (BRIGHT-like)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001394, Guinea pig)

Protein Percentage 88.32%
CDS Percentage 90.27%
Ka/Ks Ratio 0.31843 (Ka = 0.0669, Ks = 0.21)

ARID3C ENSG00000205143 (Human)

Gene Details

AT rich interactive domain 3C (BRIGHT-like)

External Links

Gene Match (Ensembl Protein ID: ENSP00000368189, Human)

Protein Percentage 85.4%
CDS Percentage 86.21%
Ka/Ks Ratio 0.2363 (Ka = 0.0867, Ks = 0.367)

Arid3c ENSMUSG00000066224 (Mouse)

Gene Details

AT rich interactive domain 3C (BRIGHT-like)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000127678, Mouse)

Protein Percentage 81.42%
CDS Percentage 82.23%
Ka/Ks Ratio 0.2396 (Ka = 0.1185, Ks = 0.4945)

Arid3c ENSRNOG00000013416 (Rat)

Gene Details

AT rich interactive domain 3C (BRIGHT-like) (Arid3c), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000039046, Rat)

Protein Percentage 82.44%
CDS Percentage 82.44%
Ka/Ks Ratio 0.22014 (Ka = 0.1123, Ks = 0.5101)

Genome Location

Sequence Coding sequence

Length: 1236 bp    Location: 39024030..39016483   Strand: -
>XM_004838441.1
ATGGAGGCCCTGCAGAGGCAGCAGGCAGCTCGGCTGGCCCAAGGGGTGGGTCCATTGGCCCCTCCTCACCCTCCACTGCCACCAAGGCCTCCCCTGCCTGGCCCCCGGACCCTGAAGGCTCCTGAGGGGGCCTTGGGTGAGGTTGGGGCTGAGGAAGAGGAGGATGCTGAAGAGGATGAGGAAGAGGAGGAAGCTGGAACAGAGGAGGAGGTGGCTGAGGAGAGTTGTCCAGGGGCCCGGGGCCCCAGCTCACCTACCGCCCAGCCTCCTGGACCCCATCCCCATGAGTGGACCTATGAGGAACAGTTCAAGCAGCTGTATGAGCTTGATGCAGACCCCAAGAGGAAGGAATTTCTGGATGACCTGTTTAGCTTCATGCAGAAGAGGGGGACACCAGTGAACCGCGTGCCCATTATGGCGAAGCAGGTGCTGGATCTCTATGCGCTGTTTCGCCTGGTGACAGCTAAGGGCGGTCTGGTGGAAGTCATCAACCGAAAGGTGTGGCGGGAAGTCACGCGCGGCCTCAGTTTGCCCACCACCATCACCTCCGCAGCCTTCACTCTTCGCACCCAGTACATGAAGTACCTGTACCCATATGAATGCGAGACGCAGGCGCTCAGCTCCCCGGGAGAGCTTCAGGCGGCCATAGACAGCAATCGGCGCGAGGGCCGGCGCCAGGCTTACACCGGCGCGCCGCACTTCGGCTTGGCGGGCCCGCCCCCTCGGGCTGCTGCGGGCCCCGCCTCTGGCCCTGGCTCTGCCCGACCTGCCCTCCCGGCCGGCACCGCCCTTGTCCCTAGCTCTGCGGCAGGCCTGCCAGTACACGCGTGCGCCCAGCTGAGCCCGAGCCCTATTAAGAAAGAGGAAAGCGGAATTCCCACCCATCGTCTGGCACTACCTGTGGGCCTTACCTTGGGACCTGTACGGAAGAAGATGGCACCAGAGGAGCCTCCAGAGAAGAGAGCTGTGCTCATGGGCCCCATGGACCCATCTCGACCTGGTGCACCCCCTAGTTTCCTATCCCGTGCCAAGATTCCCCTGAGGGAAGAGCAGCTGGATGAGCCCCTCAATCTGGCAGGCAGTGGCATCAGCAGTATCAACATGGCACTAGAGATCAACGGGGTGGTCTACACTGGCATCCTCTTTGCCCGTCGCCAGCCTGTAACAGCTTCCCAGGGTCCAACCAACCCTGCACCCCCACCCTCTACAGGGCCCCCTGCCAACCCCTTGCCCTGA

Related Sequences

XP_004838498.1 Protein

Arid3c PREDICTED: AT-rich interactive domain-containing protein 3C isoform X1 [Heterocephalus glaber]

Length: 411 aa      View alignments
>XP_004838498.1
MEALQRQQAARLAQGVGPLAPPHPPLPPRPPLPGPRTLKAPEGALGEVGAEEEEDAEEDEEEEEAGTEEEVAEESCPGARGPSSPTAQPPGPHPHEWTYEEQFKQLYELDADPKRKEFLDDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKYLYPYECETQALSSPGELQAAIDSNRREGRRQAYTGAPHFGLAGPPPRAAAGPASGPGSARPALPAGTALVPSSAAGLPVHACAQLSPSPIKKEESGIPTHRLALPVGLTLGPVRKKMAPEEPPEKRAVLMGPMDPSRPGAPPSFLSRAKIPLREEQLDEPLNLAGSGISSINMALEINGVVYTGILFARRQPVTASQGPTNPAPPPSTGPPANPLP