Details from NCBI annotation

Gene Symbol Ubap1
Gene Name ubiquitin associated protein 1, transcript variant X2
Entrez Gene ID 101698547

Database interlinks

Part of NW_004624736.1 (Scaffold)

For more information consult the page for NW_004624736.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

UBAP1 ENSCPOG00000023186 (Guinea pig)

Gene Details

ubiquitin associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019553, Guinea pig)

Protein Percentage 94.62%
CDS Percentage 94.56%
Ka/Ks Ratio 0.18732 (Ka = 0.0267, Ks = 0.1428)

UBAP1 ENSG00000165006 (Human)

Gene Details

ubiquitin associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000441024, Human)

Protein Percentage 91.63%
CDS Percentage 91.83%
Ka/Ks Ratio 0.24579 (Ka = 0.0494, Ks = 0.2009)

Ubap1 ENSMUSG00000028437 (Mouse)

Gene Details

ubiquitin-associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000072643, Mouse)

Protein Percentage 91.63%
CDS Percentage 91.43%
Ka/Ks Ratio 0.20219 (Ka = 0.0458, Ks = 0.2267)

Ubap1 ENSRNOG00000012004 (Rat)

Gene Details

ubiquitin-associated protein 1 (Ubap1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000062034, Rat)

Protein Percentage 91.63%
CDS Percentage 91.57%
Ka/Ks Ratio 0.19792 (Ka = 0.0442, Ks = 0.2232)

Genome Location

Sequence Coding sequence

Length: 1509 bp    Location: 38594932..38633193   Strand: +
>XM_004838413.1
ATGGCTTCTAAAAAGTTGGGTGCAGATTTTCATGGGACTTTCAGTTACCTTGATGATGTCCCATTTAAGATAGGAGACAAATTCAAAACACCAGCTAAAGTTGGTCTACCTATTGGCTTCTCCTTGCCTGATTGTTTGCAGGTTGTCAGAGAAGTACAGTATGACTTCTCCTTGGAAAAGAAAACCATTGAGTGGGCTGAAGATGTTAAGAAAATCCAAGAAGTCCAGCAGGAAGCAGAGCGCAAGGCTGAGGAAGCAGAAGCTAAAGTGAATTCTAAGAGTGGCCCAGAGGGTGATAGGAAAATGAGCTTCTCCAAGACTCACAGTACAGCCACTATGCCACCTCCTATTAACCCTATCCTTGCTAGCTTACAGCACAACAACATCCTCACTCCGACTCGGGTCAGCAGTAGTGCCATGAAACAGAAAGTTCTCAGCCCACCCCACACAAAGGCCGATTTCAATCCCGCTGACTTTGAATGTGAAGAAGACCCATTTGATAATCTGGAGTTAAAAACTATTGATGAGAAGGAGGAGCTGAGAAACATTCTGGTAGGAACTACTGGACCCATTATGGCTCAGTTATTGGACAATAACTTGCCCAGAGGCAGCTCTGGGTCTGTGTTACAGGATGAGGAGGTCTTGGCGTCCTTGGAACGGGCAACCCTGGATTTCAAGCCTCTTCATAAACCCAATGGCTTTATAACTTTACCACAGTTAGGCAACTGTGAAAAGATGTCGCTGTCTTCCAAAGTGTCCCTTCCTCCTATCCCTATAGTAAGCAATATCAAATCTCTGTCCTTTCCCAAACTTGACTCTGATGACAGCAGTCAGAAGACAGTCAAGCTGGCGAGCACTTTCCATAGCACATCCTGCCTCCGCAGTGGCACGTTCCGAAATTCCCTAAAGCCTTCTACCCAAAGCAGTGCCAGTGAGATCAATGGGGACCATACTCTTGGGCTTTCAGCTTTGAACTTGGATAGTGGCACAGAGGTGCCAACTCTGACAACATCCCACATGCCTTCCCTGTCTGTTTTGTCTCTGTGCACAGAAGAATCATCACCTTCAAATGCAGGTCCCACAGCTACCCCTCCAAATTTCTCAGTGTCACAAGTGCCCAACACACCCAGCTGTCCCCAGGCCTATCCTGAACTGCAAACACTGTCTCCCAGTGAGCGGCAGTGTGTAGAGACAGTGGTCAACATGGGCTATTCATATGAGTGTGTCCTGAGAGCCATGAAGAAGAAAGGAGAGAATATTGAGCAGATTCTTGACTATCTTTTTGCACATGGACAGCTTTGTGAGAAGGGCTTTGACCCCCTTTTAGTGGAAGAGGCTCTGGAAATGCACCAGTGTTCAGAAGAAAAGATGATGGAGTTTCTTCAGTTAATGAGCAAATTTAAGGAAATGGGCTTTGAACTGAAGGACATTAAGGAAGCTTTGCTATTGCACAACAATGACCAGGACAATGCTTTGGAAGACCTCATGGCTCGGGCTGGAGCCAGCTGA

Related Sequences

XP_004838470.1 Protein

Ubap1 PREDICTED: ubiquitin-associated protein 1 isoform X2 [Heterocephalus glaber]

Length: 502 aa      View alignments
>XP_004838470.1
MASKKLGADFHGTFSYLDDVPFKIGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKKTIEWAEDVKKIQEVQQEAERKAEEAEAKVNSKSGPEGDRKMSFSKTHSTATMPPPINPILASLQHNNILTPTRVSSSAMKQKVLSPPHTKADFNPADFECEEDPFDNLELKTIDEKEELRNILVGTTGPIMAQLLDNNLPRGSSGSVLQDEEVLASLERATLDFKPLHKPNGFITLPQLGNCEKMSLSSKVSLPPIPIVSNIKSLSFPKLDSDDSSQKTVKLASTFHSTSCLRSGTFRNSLKPSTQSSASEINGDHTLGLSALNLDSGTEVPTLTTSHMPSLSVLSLCTEESSPSNAGPTATPPNFSVSQVPNTPSCPQAYPELQTLSPSERQCVETVVNMGYSYECVLRAMKKKGENIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLMSKFKEMGFELKDIKEALLLHNNDQDNALEDLMARAGAS