Details from NCBI annotation

Gene Symbol Smu1
Gene Name smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans), transcript variant X2
Entrez Gene ID 101720596

Database interlinks

Part of NW_004624736.1 (Scaffold)

For more information consult the page for NW_004624736.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMU1 ENSCPOG00000006212 (Guinea pig)

Gene Details

smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005603, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 95.71%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.1946)

SMU1 ENSG00000122692 (Human)

Gene Details

smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSP00000380336, Human)

Protein Percentage 100.0%
CDS Percentage 94.22%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.2634)

Smu1 ENSMUSG00000028409 (Mouse)

Gene Details

smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030117, Mouse)

Protein Percentage 100.0%
CDS Percentage 91.68%
Ka/Ks Ratio 0.001 (Ka = 0.0004, Ks = 0.4379)

Smu1 ENSRNOG00000007671 (Rat)

Gene Details

smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) (Smu1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010463, Rat)

Protein Percentage 100.0%
CDS Percentage 91.1%
Ka/Ks Ratio 0.001 (Ka = 0.0005, Ks = 0.4588)

Genome Location

Sequence Coding sequence

Length: 1542 bp    Location: 37826935..37798167   Strand: -
>XM_004838393.1
ATGTCAATCGAAATCGAGTCTTCAGATGTGATCCGTCTTATTATGCAGTACCTGAAGGAGAACAGTTTACATCGGGCATTGGCTACCTTACAGGAAGAAACTACTGTGTCTCTGAATACTGTGGACAGTATTGAAAGTTTTGTGGCTGACATTAATAGTGGCCATTGGGATACTGTTTTACAGGCTATACAATCACTGAAATTGCCAGACAAAACCCTTATTGATCTCTATGAACAGGTTGTTTTGGAGTTGATTGAGCTCCGTGAATTGGGTGCTGCCAGGTCACTTCTGAGACAGACCGACCCCATGATCATGTTAAAACAAACACAACCAGAGCGGTATATTCATCTGGAGAACCTCCTGGCGAGGTCTTATTTTGATCCTCGTGAGGCATACCCAGATGGAAGTAGCAAAGAGAAAAGAAGAGCAGCAATTGCCCAGGCCTTAGCTGGGGAAGTCAGTGTAGTGCCTCCATCTCGTCTCATGGCATTGCTGGGACAGGCACTGAAGTGGCAACAGCACCAGGGGTTGCTTCCTCCTGGTATGACCATAGATTTGTTTCGAGGCAAAGCTGCGGTCAAAGATGTGGAAGAAGAAAAGTTTCCTACACAGCTGAGCAGGCATATTAAGTTTGGTCAGAAATCTCATGTGGAGTGTGCACGATTTTCTCCAGATGGTCAATATCTGGTCACTGGGTCTGTTGATGGATTCATTGAAGTATGGAACTTTACTACTGGAAAAATCAGGAAGGATCTTAAGTACCAGGCCCAGGATAACTTCATGATGATGGATGATGCTGTTCTCTGCATGTGTTTCAGCAGAGATACAGAAATGTTAGCAACTGGTGCCCAAGATGGAAAAATCAAGGTCTGGAAAATTCAGAGTGGACAGTGTTTAAGGAGATTTGAAAGGGCACACAGTAAAGGTGTCACCTGTCTGAGCTTTTCTAAGGACAGCAGTCAGATCCTTAGTGCTTCCTTTGACCAGACAATTAGAATTCATGGTTTAAAATCTGGGAAAACCCTGAAGGAATTTCGTGGTCATTCCTCCTTTGTTAATGAAGCAACATTTACACAAGATGGACATTATATTATTAGTGCATCCTCTGATGGCACTGTAAAGATCTGGAATATGAAGACCACAGAATGTTCAAATACCTTTAAATCCCTGGGCAGCACTGCAGGGACTGACATTACTGTCAACAGTGTGATTTTGCTTCCTAAAAACCCAGAGCACTTTGTGGTGTGCAACAGATCGAACACAGTGGTCATCATGAACATGCAGGGGCAGATTGTCAGAAGCTTTAGCTCTGGTAAAAGAGAAGGTGGTGACTTTGTGTGCTGTGCCCTGTCTCCTCGTGGTGAATGGATCTACTGCGTGGGAGAGGACTTTGTGCTCTACTGTTTCAGCACAGTCACTGGCAAGCTGGAGAGAACTTTGACAGTTCACGAAAAGGATGTGATTGGTATTGCACATCATCCTCATCAGAACCTCATTGCTACCTACAGTGAAGATGGACTCTTAAAGCTCTGGAAACCCTAA

Related Sequences

XP_004838450.1 Protein

Smu1 PREDICTED: WD40 repeat-containing protein SMU1 isoform X2 [Heterocephalus glaber]

Length: 513 aa      View alignments
>XP_004838450.1
MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENLLARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPPGMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP