Details from NCBI annotation

Gene Symbol Topors
Gene Name topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
Entrez Gene ID 101717472

Database interlinks

Part of NW_004624736.1 (Scaffold)

For more information consult the page for NW_004624736.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TOPORS ENSCPOG00000013705 (Guinea pig)

Gene Details

topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012342, Guinea pig)

Protein Percentage 89.63%
CDS Percentage 92.0%
Ka/Ks Ratio 0.24334 (Ka = 0.0518, Ks = 0.2129)

TOPORS ENSG00000197579 (Human)

Gene Details

topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSP00000353735, Human)

Protein Percentage 91.74%
CDS Percentage 91.77%
Ka/Ks Ratio 0.14182 (Ka = 0.0394, Ks = 0.2776)

Topors ENSMUSG00000036822 (Mouse)

Gene Details

topoisomerase I binding, arginine/serine-rich

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000046843, Mouse)

Protein Percentage 85.52%
CDS Percentage 84.52%
Ka/Ks Ratio 0.12015 (Ka = 0.0761, Ks = 0.6335)

Topors ENSRNOG00000006485 (Rat)

Gene Details

topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase (Topors), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063561, Rat)

Protein Percentage 84.47%
CDS Percentage 83.9%
Ka/Ks Ratio 0.12969 (Ka = 0.0825, Ks = 0.6365)

Genome Location

Sequence Coding sequence

Length: 3234 bp    Location: 37219717..37210019   Strand: -
>XM_004838384.1
ATGCGCTGGCAGAGCGGGGATTGTGTTTTGACTCGCGGAGCGTGTGGCGGTGTGCTGTTTCTGCCCTGCCCCCACGCTGCCTCCGGTAAAGAACGTTTTCCGTTACAGGGGTCGCAGCCGCCGCCGGGATCTCCGCTGTCTCGCGAGGAGGGCAACGCGCCCCCGCCCGCTCCGGCTGCCGAGGGTAGGCGGAGAAGTCGCCGGGTCCGCCTTCGCGGATCCTGCCGTCACCGACCGAGCTTCCTGGGCCGCCGAGAGCTTTCTTCTAGCGCCCCAGCCGGGCCTGCGCCGGCGTCTTCCGAGATAATGGCATCAGCCGCTAAGGAATTTAAAATGGACAACTTTTCACCTAAAGCTGGCACTAGCAAATTGCAACAGACAGTACCAGCTGATGCATCTCCTGATTCTAAGTGTCCTATATGCTTGGATAGATTTGATAATGTGTCTTACTTAGATCGCTGCTTACATAAGTTCTGTTTTCGCTGTGTACAGGAGTGGTCAAAAAACAAAGCTGAATGTCCACTATGTAAACAGCCCTTTGACTCTATTTTCCATTCTGTGAGGGCAGAAGATGACTTCAAGGAATATGTCCTAAGGCCTTCATATAATGGTTCTTTTGCCACCCCTGATGGTCGACGATTTCGCTACCGCACAACTATGACAAGGGAACGAAGTGCTTCTGTGTATTCACCTAGTAGTACTTTGAGTAGAAGAACAACTACTCCTCCAGATAGTGGGGTACTATTTGAGGGGTTAGATATTTCAACAAGACATAGAGATGTTGAAATTCCTCAACTTATGAGACAGATTGCAATAAGGCGACAGCATACTTCAGATGAGAGATCTTTGAGGAAAATTCAAGAGCAAGATATTATTAATTTTAGACGAACTCTCTATCGTGCTGGTGCTCGAGTTAGAAATATTGAAGATGGTGGCCGCTACAGGGATATTTCAGCTGAATTTTTCCGTAGAAATCCAGCTTGCCTTCACAGATTAGTCCCTTGGTTAAAACGTGAACTGACAGTTCTCTTTGGAGCTCATGCATCATTAGTCAATATTGTCCAGCATATCATCATGAGTAATGTCACTCGCTATGACTTGGAGAGTCAAGCATTTGTGTCTGATTTAAGACCATTTTTACTTAATCGAACTGAGCATTTTATACATGAATTTATCAGTTTTGCTCGATCTCCTTTTAATATGGCAGCTTTTGACCAGCATGCTAATTACGATTGTCCTGCTCCTTCATATGAAGAAGGCAGCCATTCTGATTCTTCAGTAATAACAATATCTCCAGATGAGACTGAGACCCAGGAGCAGGATATTAATGAAGCCACTGTTAGTCAGGCACCATGGGATGATGAAACTCCAGGACCATCTTACTCAAGCTCAGAGCAGGTACATGTTGCCATGTCTTCCCTTTTAAATACTTCTGACAGTTCAGATGAAGAACTTGTCACAGGAGGTGCCCCATCTCAAATACAAGGAGTACAAACCAATGAGGACCTAAATAATGACAGTGATTCTTCAGATAATTGTGTCATTGTTGGGTTTGTTAAACCTCTAGCTGAGAGGACCCCAGAACTTGTTGAATTATCCTCTGATTCTGAAGAGTTAGGCTCTTATGAGAAAATGGAGACGGTAAAGACTCAAGAACAAGAGCAATCTTATAGTTCTGGTGATAGTGATGTTAGTAGATGTTCATCTCCACACTCTGTCCTTGGAAAGGATGAACAAATGAATAAAGGTCATTGTGATTCTGGTACAAGAATCAAATCAAAGAGAGAAGAGAAACGATCTACATCATTGTCATCTCCCAGAGACCTGAGCTCATCTATGAGAGGAGACAGAGTATGTTCCCCATATAACCATAGACACAGAAAGAGAGGAAGATCTAGAAGTTCAGATTCACATTCCCAGAGTAGAAGTGGGCATGATCAGAGGAATTACCGAAAGCATCATGGAAAGAAAAGAATGAAGAGCAGACGGTCCAGAAGCAGGGAGAGCAGCAGATCTAAAGGGAGAAGAGACAAAAAGAGATCAAGAACTAGAGACAGCAGTTGGTCACGAAGAAGCCAAACACTTTCTTTAAGTAGTGAAAGCTCAAGCAGATCAAGGTCTCGGAGCAGTGATCACAGCAAAAGATCACAGAGCAGAAATAGAGATCGTTATTACTTAAGGAATAATTATGGAAGCAGATATAAATGGGAGTATACCTATTATAGTAGAAACAAAGATAGGGATGGCTATGAATCTTCTTATAGAAGGAAGACTCTATCCAGAGCCCATTATTCTAGACAATCTTCAAGTCCTGAATTTAGAGTTCAGTCCTTTTCTGAGAGAACAAATGCTAGGAAAAAGAATAATCACAGTGAAAGGAAATACTATTACTATGAAAAGCACAGATCGAGGAGCCTGTCTAGTAATAGGTCAAGGACAGCATCTACAGGAACTGATCGGGTGAGAAACGAAAAGCCTGGGGGGAAGCGAAAATACAAAACACGGCATTTGGAAGGTTCTAATGAAGTGGTTCAACCATCTCGTGAATTTGCTTCTAAAGTAAAAGACAGTCATTACCAAAAATCTTCATCAAAATTTGATGGAAGCTACAAAAATGAGAGTGATAGCTTTTCAGACAGCCGATCATCAGACAGAGACACAAAACGCAAGAGAAGAAAAAGGAGGACTCGGAGCCTAAGTGTGGAAATAGTTTATGAAGGAAAAGCTACTGATACAAGTAAACATCATAAAAAGAAAAAGAAAAAACACAAGAAGAAGCATAAGAAGCACCATGGAGATAATACACGTTCCCCGGTTGTTATTACCATTGATAGTGATAGTGATAAGGATTCTGAGGTAAAGGCAGACATGGAATGTGACAATAATGGTACTCAAGACTCTCTACAAAATGAATTTCTGGCTCCTTCCTTAGAACCACTTGAAGCTAAAGATATAGTTACAATTGAAGATGAATTTAGTGTCCTAGACAAGGAGTGTGATATTACCACACTTACTAACAACTTGAATAATGCCAACAAAACTGTAGGTGATATTCCACCCCAGACAGCTTCAGCTGAACAAACTCTTGATGTAAGAGAAGAGTGCACCTTTGCCTCTGTTTTGGAGAACCAATCCAGTAATGTATCTATTCAAATTGAGCCATCAAACCACTTGCCATCTCCACGGACCTCATTATTGTCGGTGTCTCTTGGTAGAGACTGTGATATGTCTTAA

Related Sequences

XP_004838441.1 Protein

Topors PREDICTED: E3 ubiquitin-protein ligase Topors [Heterocephalus glaber]

Length: 1077 aa      View alignments
>XP_004838441.1
MRWQSGDCVLTRGACGGVLFLPCPHAASGKERFPLQGSQPPPGSPLSREEGNAPPPAPAAEGRRRSRRVRLRGSCRHRPSFLGRRELSSSAPAGPAPASSEIMASAAKEFKMDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFATPDGRRFRYRTTMTRERSASVYSPSSTLSRRTTTPPDSGVLFEGLDISTRHRDVEIPQLMRQIAIRRQHTSDERSLRKIQEQDIINFRRTLYRAGARVRNIEDGGRYRDISAEFFRRNPACLHRLVPWLKRELTVLFGAHASLVNIVQHIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFISFARSPFNMAAFDQHANYDCPAPSYEEGSHSDSSVITISPDETETQEQDINEATVSQAPWDDETPGPSYSSSEQVHVAMSSLLNTSDSSDEELVTGGAPSQIQGVQTNEDLNNDSDSSDNCVIVGFVKPLAERTPELVELSSDSEELGSYEKMETVKTQEQEQSYSSGDSDVSRCSSPHSVLGKDEQMNKGHCDSGTRIKSKREEKRSTSLSSPRDLSSSMRGDRVCSPYNHRHRKRGRSRSSDSHSQSRSGHDQRNYRKHHGKKRMKSRRSRSRESSRSKGRRDKKRSRTRDSSWSRRSQTLSLSSESSSRSRSRSSDHSKRSQSRNRDRYYLRNNYGSRYKWEYTYYSRNKDRDGYESSYRRKTLSRAHYSRQSSSPEFRVQSFSERTNARKKNNHSERKYYYYEKHRSRSLSSNRSRTASTGTDRVRNEKPGGKRKYKTRHLEGSNEVVQPSREFASKVKDSHYQKSSSKFDGSYKNESDSFSDSRSSDRDTKRKRRKRRTRSLSVEIVYEGKATDTSKHHKKKKKKHKKKHKKHHGDNTRSPVVITIDSDSDKDSEVKADMECDNNGTQDSLQNEFLAPSLEPLEAKDIVTIEDEFSVLDKECDITTLTNNLNNANKTVGDIPPQTASAEQTLDVREECTFASVLENQSSNVSIQIEPSNHLPSPRTSLLSVSLGRDCDMS