Sequence details NCBI ID: XM_004838383.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ddx58
Gene Name DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
Entrez Gene ID 101717131

Database interlinks

Part of NW_004624736.1 (Scaffold)

For more information consult the page for NW_004624736.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

DDX58 ENSCPOG00000001598 (Guinea pig)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 58

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001442, Guinea pig)

Protein Percentage 87.66%
CDS Percentage 90.48%
Ka/Ks Ratio 0.25421 (Ka = 0.0623, Ks = 0.2453)

DDX58 ENSG00000107201 (Human)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 58

External Links

Gene Match (Ensembl Protein ID: ENSP00000369213, Human)

Protein Percentage 78.46%
CDS Percentage 85.71%
Ka/Ks Ratio 0.36776 (Ka = 0.1197, Ks = 0.3256)

Ddx58 ENSMUSG00000040296 (Mouse)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 58

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000042433, Mouse)

Protein Percentage 75.24%
CDS Percentage 78.92%
Ka/Ks Ratio 0.22485 (Ka = 0.1561, Ks = 0.6942)

Ddx58 ENSRNOG00000006384 (Rat)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 (Ddx58), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000057492, Rat)

Protein Percentage 74.58%
CDS Percentage 79.04%
Ka/Ks Ratio 0.21084 (Ka = 0.151, Ks = 0.7161)

Genome Location

Sequence Coding sequence

Length: 2778 bp    Location: 37197630..37134727   Strand: -
Raw sequence   
>XM_004838383.1
ATGACGGCGGAGCAGCGGCACAACCTGCGAGCCTACAGCGACTATGTCAGGAAGAGTCTGGATCCTACCCATATCCTTAGCTACATGACCGCCTGGCTTAGAGAGGATGAAGTGCAATATATCCAGGCTGAGAAAAACAACAAAGGTCCGATGGAGGCTGCCTCACTTTTTCTTAAGCTCTTGTTGGAACTCCAGGTGGAAGGCTGGTTCCGTGGCTTTTTGGATGCCCTAAACCATGCAGGTTACTCTGGACTTTACGAAGCCATTGAAAGGTGGGATTTTCAAAACCTTGAAAAGTTAGAGGACCATAGATCACTTTTGAGACGTTTAGAACCAGAATTTAAAGCCAGAATTATTCCAACAGAAATCCTCCCAGAAATAGCTGAATGTTTAATTACTCAGGATTGTGAAGAAATACGGCAAGTTTGCATCAGTAGGGGGCCTATGGCAGGTGCAGAGAAAATGGCTGAATGTCTTCTCAGATCAGACAAGGAGAACTGGCCCAAGATTTTGAAACTTGCTTTGGAGAAAGATGGAAACATCTTCAATGAACTGTGGATTATAGAAGAAGGTATGAAAGATTTTGAAATTAAAGATCTTGAGGATGACAAAATAGAACATTCTGACATACAGATTTTCTACCAGGAAGATCCAGGAGACCAAAATCTTAGTCAGAATCCCTGTTCACCTTCAGAAGTGTCTCATACTAACTTATACAGCCCATTGAAGCCAAGAAGTTACCAGTTAGAGCTTGCTTTGCCTGCGAAGGAAGGGAAAAATACAATAATATATGCTCCTACTGGTTGTGGAAAAACCTTTGTTTCACTTCTTATATGTGAACATCATCTTCAAAAGTTTTCACAAGGACGAAAAGGGAAAGTTGTCTTTTTTGCTAACCAGGTCCCTGTGTATGAACAGCAGAAGACTGTGTTCTCAAGATATTTTGAAAGACTTGGCTACAGAGTTACAGGCATTTCTGGAGCAACAGCCGAGAATGTCCCAGTGGCACAGACTATTGAGAGCAATGACATCATCATTTTAACACCACAGATTCTTCTGAATAATCTTAAAAATGGAACCGTTCCATCACTGTCTATCTTCACCTTGATGATATTTGATGAATGCCACAACACAAGTAAACACCACCCATACAATATGATCATGTTCAATTATCTAGAACAGAAACTTGGAGGATCTTCAGATCCATTGCCTCAGGTCATTGGGCTGACTGCGTCAGTTGGTGTTGGAGATGCTAAAAACACAGAGGAAGCCATAGCCTACATTTGCAAACTGTGTGCTTCTCTTGATGCATCAGTGATAGCAACAGTTAAAGAAAACTTGGAGGAACTGGAGCAAGTTGTTTATAAGCCCCAGAAAATTTCCAGGAAAGTGAAACCACGGACTACCAACAGATTTAAATTGATTATATCTCAGCTGATGAAGGAGACGGAGCATATGGCAAAGATTATCTCTGAAGAACTTGGTTACTTATTTGAAATTCAAGACAGAGTATTTGGAACACAGAAATATGAACAGTGGATTGTTGAAGTTCATAAAGCATGCAGGGTGTTTCAGTTGCCAGACAAAGAAGAAGAGAGCAGGATTTGTAAGGCAATGTATTTGTACACTTCACATTTGCGGAAATATAATGATACCCTTATTATCAGTGAGGATGCACAAATGAAAGCCGGTTTGGATTACTTGAAGGATTTCTTTAACAATGTGCGAGCAGCGGCATTTGATGAGATTGAACAAGATCTTACTCGGAGGTTTGAAGAAAAGTTGCCAGAACTAGAAAATGTTTCCATGGATCCCAGCAATGAGAACCCTAAACTCAAAGACCTCCACTTAATCTTACAAGAGGAGTACCACGTAAACCCAAAGACAAGAACCATTCTTTTTGTGAAAACCAGAGCGCTTGTGGATGCTTTAAAAAAATGGATTGAAGAAAATTCTGCACTTAACTTTCTAAAACCTGGCATATTAACTGGACGTGGCAGAACAAGTAATAAAACAGGAATGACCCTCCCAGCACAGAAGTGTGTATTGGATTCATTCAGAGCCAATGGAGATAATATTCTGATTGCCACCTCGGTTGCTGATGAAGGCATTGACATTGCTCAGTGCAATCTAGTTATCTTGTATGAGTATGTGGGCAATGTCATCAAAATGATCCAAAGCAGAGGCAGAGGAAGAGCAAAAGGTAGCAAGTGCTATCTCCTGAGTAGTAATGCTGATGTAATTGAAAAAGAAAATACAAACTTATACAAGGAAAAAATGATGAATGACTCCATTTCAATTCTTCAGACATGGGATGAAGCAACATTTCAAAAGAGAATTCACCATATACAGGGTCAAGAAAAATTTATCAGAGATAGTCAACCAAAACCCAAACCCGTCCCTGATAAGGGGAATAAAAGACTGCTCTGTGGAAAGTGCAAAGTCTTGGCATGTTATACAGATGACATTCGAGTGATAGAGGAATCCCATCACACTGTGATTGGAGATGCTTTTAAGGAGTGCTTTGTGAGTAAACCACACCCCAAACCACGGAGCTATGGAAATTTTGAAAAGAAAGAAAAGATATTCTGTGCCAGCCAGAACTGTGGCCATGACTGGGGAATACATGGGAAATATAAGACGTTTGAGATTCCAGTCATAAAGATTGAAAGTTTTGTGGTGGAGGATATTGTAACTGGACTTCAGAAACAGTACACAAAGTGGAAGGACTTTCCTTATAAGAAGATAGAATTTCATGCTACAGAAATGTCTAAATGA

Related Sequences

XP_004838440.1 Protein

Ddx58 PREDICTED: probable ATP-dependent RNA helicase DDX58 [Heterocephalus glaber]

Length: 925 aa      View alignments
>XP_004838440.1
MTAEQRHNLRAYSDYVRKSLDPTHILSYMTAWLREDEVQYIQAEKNNKGPMEAASLFLKLLLELQVEGWFRGFLDALNHAGYSGLYEAIERWDFQNLEKLEDHRSLLRRLEPEFKARIIPTEILPEIAECLITQDCEEIRQVCISRGPMAGAEKMAECLLRSDKENWPKILKLALEKDGNIFNELWIIEEGMKDFEIKDLEDDKIEHSDIQIFYQEDPGDQNLSQNPCSPSEVSHTNLYSPLKPRSYQLELALPAKEGKNTIIYAPTGCGKTFVSLLICEHHLQKFSQGRKGKVVFFANQVPVYEQQKTVFSRYFERLGYRVTGISGATAENVPVAQTIESNDIIILTPQILLNNLKNGTVPSLSIFTLMIFDECHNTSKHHPYNMIMFNYLEQKLGGSSDPLPQVIGLTASVGVGDAKNTEEAIAYICKLCASLDASVIATVKENLEELEQVVYKPQKISRKVKPRTTNRFKLIISQLMKETEHMAKIISEELGYLFEIQDRVFGTQKYEQWIVEVHKACRVFQLPDKEEESRICKAMYLYTSHLRKYNDTLIISEDAQMKAGLDYLKDFFNNVRAAAFDEIEQDLTRRFEEKLPELENVSMDPSNENPKLKDLHLILQEEYHVNPKTRTILFVKTRALVDALKKWIEENSALNFLKPGILTGRGRTSNKTGMTLPAQKCVLDSFRANGDNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQSRGRGRAKGSKCYLLSSNADVIEKENTNLYKEKMMNDSISILQTWDEATFQKRIHHIQGQEKFIRDSQPKPKPVPDKGNKRLLCGKCKVLACYTDDIRVIEESHHTVIGDAFKECFVSKPHPKPRSYGNFEKKEKIFCASQNCGHDWGIHGKYKTFEIPVIKIESFVVEDIVTGLQKQYTKWKDFPYKKIEFHATEMSK