Sequence details NCBI ID: XM_004838382.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Aco1
Gene Name aconitase 1, soluble, transcript variant X2
Entrez Gene ID 101716545

Database interlinks

Part of NW_004624736.1 (Scaffold)

For more information consult the page for NW_004624736.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ACO1 ENSCPOG00000003768 (Guinea pig)

Gene Details

aconitase 1, soluble

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003403, Guinea pig)

Protein Percentage 94.26%
CDS Percentage 93.36%
Ka/Ks Ratio 0.16205 (Ka = 0.0296, Ks = 0.1827)

ACO1 ENSG00000122729 (Human)

Gene Details

aconitase 1, soluble

External Links

Gene Match (Ensembl Protein ID: ENSP00000309477, Human)

Protein Percentage 94.6%
CDS Percentage 91.45%
Ka/Ks Ratio 0.09996 (Ka = 0.0283, Ks = 0.2834)

Aco1 ENSMUSG00000028405 (Mouse)

Gene Details

aconitase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000100038, Mouse)

Protein Percentage 93.03%
CDS Percentage 87.25%
Ka/Ks Ratio 0.06682 (Ka = 0.0357, Ks = 0.5348)

Aco1 ENSRNOG00000005849 (Rat)

Gene Details

aconitase 1, soluble (Aco1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008337, Rat)

Protein Percentage 93.14%
CDS Percentage 87.06%
Ka/Ks Ratio 0.0661 (Ka = 0.036, Ks = 0.5454)

Genome Location

Sequence Coding sequence

Length: 2670 bp    Location: 37080201..37126426   Strand: +
Raw sequence   
>XM_004838382.1
ATGAAGAACCCATTTGCACATCTGGCTGAGCCCTTGGATCCTGCACAACCAGGAAAGAAATTCTTTAATTTAAATAAATTGGAGGATTCAAGATATGGACGCTTACCGTTTTCTATCAGAGTTCTCCTGGAGGCAGCCATTCGGAACTGTGATGAGTTTTTGGTGAAGAAAAATGACATTGAAAATATTCTAAATTGGAATGTCATGCAGCATAAGAACATAGAAGTGCCATTTAAACCTTCCCGTGTCATTCTGCAAGATTTTACGGGTGTGCCAGCTGTAGTTGACTTTGCTGCAATGCGTGATGCCGTGAAGAAGTTAGGAGGCGATCCTGAGAAAATAAACCCCATCTGTCCTGCTGATCTTGTAATTGATCATTCCATCCAGGTCGATTTCAGCAGAAGGGTAGACAGCTTGCAGAAGAATCAAGACCTTGAATTTGAAAGAAATAAAGAACGATTTGAGTTTTTAAAGTGGGGTTCCCAGGCTTTTCGAAACATGCGGATTATTCCTCCTGGCTCAGGAATCATCCACCAGGTGAATTTGGAGTATTTGGCAAGAGTGGTATTTGATCAGGATGGATATTATTACCCAGACAGCCTCGTGGGCACAGATTCGCACACTACCATGATTGATGGTTTGGGTGTTCTTGGTTGGGGTGTGGGTGGAATTGAAGCAGAAGCTGTCATGCTGGGTCAGCCAATCAGCATGGTGCTTCCCCAGGTGATTGGCTACAGGCTGATGGGAAAGCCTCAACCTCTGGTAACATCAACTGACATTGTGCTCACCATCACCAAGCACCTCCGCCAGGTTGGAGTTGTTGGCAAATTTGTTGAGTTCTTCGGGCCAGGAATAACCCAGCTGTCCATTGCTGACCGAGCTACAGTTGCCAACATGTGTCCAGAGTATGGAGCAACTGCTGCATTTTTCCCAGTTGATGAAGTTAGTATTAAGTATTTGGTACAAACAGGTCGAGACGAAAACAAAGTAAAGCACATGAAAAAGTATCTTCAAGCTGTAGGAATGTTTCGAGATTTCAGCAACCCCTCTCAAGACCCAGATTTCACCCAGGTTGTGGAATTAGATTTGAAAACAGTAGTACCTTGTTGCAGTGGACCCAAAAGGCCTCAAGATAAAGTTGCTGTGTCTGACATGAAAAAGGACTTTGAGAGCTGCCTTGGAGCCAAGCAAGGATTTAAAGGATTCCAAATTGCTCCAGAACATTATAGTGATCATAAGACGTTTATCTACAATAATAATGAGTTCACCCTTGCTCATGGATCTGTGGTAATCGCTGCCATTACTAGCTGCACAAACACCAGTAATCCGTCTGTGATGTTAGGAGCAGGATTGTTAGCAAAGAAAGCCGTGGATGCTGGCCTGAATGTGAAGCCTTACATCAAAACCAGCCTGTCTCCTGGAAGTGGTGTGGTCACCTACTACCTGCGAGAAAGTGGAGTCATGCCTTATCTGTCTCAGCTTGGGTTTGACGTGGTGGGCTATGGCTGTATGACCTGCATTGGCAACAGTGGGCCCTTACCTGAACCAGTAGTGGAAGCCATCACTCAGGGAGACCTAGTAGCTGTTGGAGTGCTATCTGGGAATAGAAATTTTGAAGGTCGTGTCCACCCCAACACTCGGGCCAACTATTTAGCATCTCCTCCCTTAGTAATAGCCTATGCCATTGCTGGGACCATCAGGATCGACTTTGAGAAAGAGCCGTTGGGGGTAAATGCAAAGGGACAACAGATATTTCTGAAAGATATCTGGCCAACTCGAGATGAGATCCAGGCAGTGGAGCAGCGGTTTGTCATCCCTGGGATGTTTAAGGAGGTCTATCAGAAAATAGAGACTGTGAATGAAAGCTGGAATGCCTTAGCAGCCCCATCAGATAAGCTGTATCTGTGGAATCCCAAATCTACATACATTAAATCACCACCATTCTTTGAAAACTTGACTTTGGATCTCCAGCCCCCCAAATCTATAGTGGGTGCCCACGTGTTATTAAATTTGGGAGATTCAGTAACAACTGATCACATCTCTCCAGCTGGAAATATTGCAAGAAACAGCCCTGCTGCTCGCTATTTAACTAACAGAGGCCTAACTCCACGAGAATTCAACTCTTACGGCTCCCGCAGGGGTAATGATGCCATCATGGCACGGGGAACATTTGCCAACATTCGTTTGTTAAACAAATTTTTGAACAAGCAGGCACCACAGACTATACATCTCCCTTCTGGAGAAATTCTTGATGTGTTTGATGCTGCTGAGCGATACCAGCAAGCAGGCCTTCCCCTGATTGTTCTGGCTGGCAAAGAGTATGGCTCAGGCAGCTCCCGAGACTGGGCAGCCAAAGGCCCTTTCCTGCTGGGAATCAAAGCTGTTCTGGCTGAGAGCTATGAGCGCATTCACCGCAGTAACCTGGTTGGGATGGGGGTAATCCCCCTCGAGTATCTCCCTGGTGAAAATGCAGACTCTCTGGGACTCACAGGGCAGGAACGATACACTGTCATCATTCCAGAGAACCTCAGACCACAAATGAAAGTACAGGTTAAGCTGGATACTGGGAAGACCTTCCAGGTTGTCATGAGGTTTGACACTGACGTGGAGCTCACTTATTTCCACAATGGGGGCATCCTCAACTACATGATCCGCAAGATGGCCAAGTAG

Related Sequences

XP_004838439.1 Protein

Aco1 PREDICTED: cytoplasmic aconitate hydratase isoform X2 [Heterocephalus glaber]

Length: 889 aa      View alignments
>XP_004838439.1
MKNPFAHLAEPLDPAQPGKKFFNLNKLEDSRYGRLPFSIRVLLEAAIRNCDEFLVKKNDIENILNWNVMQHKNIEVPFKPSRVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPICPADLVIDHSIQVDFSRRVDSLQKNQDLEFERNKERFEFLKWGSQAFRNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGVLGWGVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPQPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGITQLSIADRATVANMCPEYGATAAFFPVDEVSIKYLVQTGRDENKVKHMKKYLQAVGMFRDFSNPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQIAPEHYSDHKTFIYNNNEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVKPYIKTSLSPGSGVVTYYLRESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVNAKGQQIFLKDIWPTRDEIQAVEQRFVIPGMFKEVYQKIETVNESWNALAAPSDKLYLWNPKSTYIKSPPFFENLTLDLQPPKSIVGAHVLLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPREFNSYGSRRGNDAIMARGTFANIRLLNKFLNKQAPQTIHLPSGEILDVFDAAERYQQAGLPLIVLAGKEYGSGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPGENADSLGLTGQERYTVIIPENLRPQMKVQVKLDTGKTFQVVMRFDTDVELTYFHNGGILNYMIRKMAK