Details from NCBI annotation

Gene Symbol Lingo2
Gene Name leucine rich repeat and Ig domain containing 2, transcript variant X4
Entrez Gene ID 101713176

Database interlinks

Part of NW_004624736.1 (Scaffold)

For more information consult the page for NW_004624736.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LINGO2 ENSCPOG00000008899 (Guinea pig)

Gene Details

leucine rich repeat and Ig domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007993, Guinea pig)

Protein Percentage 97.52%
CDS Percentage 94.5%
Ka/Ks Ratio 0.06877 (Ka = 0.0123, Ks = 0.1783)

LINGO2 ENSG00000174482 (Human)

Gene Details

leucine rich repeat and Ig domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000369328, Human)

Protein Percentage 98.51%
CDS Percentage 93.29%
Ka/Ks Ratio 0.02835 (Ka = 0.0073, Ks = 0.2566)

Lingo2 ENSMUSG00000045083 (Mouse)

Gene Details

leucine rich repeat and Ig domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000130423, Mouse)

Protein Percentage 97.03%
CDS Percentage 90.54%
Ka/Ks Ratio 0.0376 (Ka = 0.0151, Ks = 0.4018)

Lingo2 ENSRNOG00000005634 (Rat)

Gene Details

leucine rich repeat and Ig domain containing 2 (Lingo2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065270, Rat)

Protein Percentage 97.18%
CDS Percentage 91.22%
Ka/Ks Ratio 0.03452 (Ka = 0.0132, Ks = 0.3836)

Genome Location

Sequence Coding sequence

Length: 1821 bp    Location: 32203250..32186995   Strand: -
>XM_004838380.1
ATGCTTCACACGGCCGTGTCATGCTGGCAGCCATTCCTGGGTCTGGCTGTGCTGTTGATCTTCATGGGATCCACCATTGGCTGCCCTGCCCGCTGTGAGTGCTCTGCCCAGAACAAATCTGTTAGCTGCCACAGAAGGCGTTTGATTGCCATCCCAGAGGGCATTCCCATCGAGACCAAGATCTTGGACCTCAGCAAAAACAGGCTGAAAAGCGTCAACCCTGAAGAATTTATATCATACCCTCTACTGGAAGAGATAGACTTAAGTGACAACATCATCGCCAATGTGGAACCAGGAGCATTTAACAATCTCTTTAACCTGCGTTGCCTCCGCCTAAAGGGCAATCGCTTGAAGTTGGTCCCTTTAGGAGTATTCACGGGGCTGTCCAACCTTACCAAGCTTGACATTAGTGAGAATAAGATTGTTATTTTACTGGACTACATGTTTCAGGATCTGCATAATCTGAAGTCTCTAGAAGTGGGAGACAATGATTTGGTTTACATATCACACAGGGCCTTCAGTGGGCTACTTAGCTTGGAACAACTCACCCTGGAGAAATGCAATTTAACAGCGGTGCCAACAGAAGCCCTCTCCCACCTCCGCAGCCTCATCAGCCTGCACCTGAAGCATCTTAATATCAACAATATGCCCGTGTATGCCTTTAAAAGATTATTCCACCTGAAACACTTAGAGATTGATTACTGGCCTTTACTGGATATAATGCCTGCCAATAGCCTCTATGGTCTCAATCTCACATCCCTGTCAATCACTAACACTAACCTATCCACTGTACCCTTCCTTGCCTTTAAACACCTTGTATACCTGACCCACCTTAACCTCTCCTACAATCCCATCAGCACTATTGAAGCAGGCATGTTCTCTGATCTGATCCGCCTTCAAGAGCTTCATATAGTGGGAGCCCAGCTCCGCACCATTGAACCTCACTCATTCCAAGGGCTCCGCTTTCTGCGTGTGCTCAATGTGTCTCAGAACCTGCTGGAAACTTTGGAAGAGAATGTCTTCTCCTACCCTCGAGCTTTGGAGGTCTTGAGCATTAATAATAATCCATTGACCTGTGACTGTCGTCTCCTCTGGATCCTGCAGAGACAGCCCACCCTGCAGTTTGGTGGCCAGCAACCCATGTGTGCTGGCCCAGACACCATCCGTGAGAGATCATTCAAGGATTTTCATAGCACTGCCCTTTCTTTTTACTTTACCTGCAAAAAACCCAAAATCCGTGAAAAGAAGTTGCAGCACATGCTTGTGGATGAAGGGCAGACAGTCCAGCTTGAATGCAGTGCTGATGGAGACCCACAGCCTGTGATTTCCTGGGTGACACCTAGAAGGCGTTTTATCACCACCAAGTCCAACGGCAGAGCCACCGTGTTGGGTGATGGCACCTTGGAAATCCGCTTTGCCCAGGATCAAGACAGTGGGATGTATGTTTGCATCGCTAGCAATGCTGCTGGGAATGACACCTTCACAGCCTCCTTAACTGTGAAAGGATTCACTTCAGATCGCTTCCTATACGCAAATAGGACCCCTATGTACATGACGGACTCCAATGACACTATTTCCAATGGCACCAATGCTAATACTTTTTCCCTGGACCTTAAAACAATACTGGTATCTACAGCCATGGGCTGTTTCACATTCCTGGGAGTGGTTTTATTTTGTTTTCTCCTCCTTTTTGTGTGGAGCCGAGGGAAAGGCAAGCACAAAAACAGCATTGACCTTGAATATGTGCCCCGAAAAAACAATGGTGCTGTTGTGGAAGGGGAGGTGGCTGGACCCAGGAGGTTCAACATGAAAATGATTTGA

Related Sequences

XP_004838437.1 Protein

Lingo2 PREDICTED: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2-like isoform X4 [Heterocephalus glaber]

Length: 606 aa      View alignments
>XP_004838437.1
MLHTAVSCWQPFLGLAVLLIFMGSTIGCPARCECSAQNKSVSCHRRRLIAIPEGIPIETKILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRCLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDIMPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSYPRALEVLSINNNPLTCDCRLLWILQRQPTLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIREKKLQHMLVDEGQTVQLECSADGDPQPVISWVTPRRRFITTKSNGRATVLGDGTLEIRFAQDQDSGMYVCIASNAAGNDTFTASLTVKGFTSDRFLYANRTPMYMTDSNDTISNGTNANTFSLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNSIDLEYVPRKNNGAVVEGEVAGPRRFNMKMI