Sequence details NCBI ID: XM_004838364.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Plaa
Gene Name phospholipase A2-activating protein, transcript variant X1
Entrez Gene ID 101708135

Database interlinks

Part of NW_004624736.1 (Scaffold)

For more information consult the page for NW_004624736.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PLAA ENSCPOG00000012969 (Guinea pig)

Gene Details

phospholipase A2-activating protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011676, Guinea pig)

Protein Percentage 92.81%
CDS Percentage 90.71%
Ka/Ks Ratio 0.17209 (Ka = 0.0487, Ks = 0.2832)

PLAA ENSG00000137055 (Human)

Gene Details

phospholipase A2-activating protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000380460, Human)

Protein Percentage 93.46%
CDS Percentage 92.37%
Ka/Ks Ratio 0.11983 (Ka = 0.0315, Ks = 0.2627)

Plaa ENSMUSG00000028577 (Mouse)

Gene Details

phospholipase A2, activating protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000102724, Mouse)

Protein Percentage 92.32%
CDS Percentage 89.84%
Ka/Ks Ratio 0.10089 (Ka = 0.0382, Ks = 0.379)

Plaa ENSRNOG00000007753 (Rat)

Gene Details

phospholipase A2, activating protein (Plaa), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010621, Rat)

Protein Percentage 92.96%
CDS Percentage 90.1%
Ka/Ks Ratio 0.09214 (Ka = 0.035, Ks = 0.3794)

Genome Location

Sequence Coding sequence

Length: 2388 bp    Location: 31169739..31127955   Strand: -
Raw sequence   
>XM_004838364.1
ATGGCGAGTAGCGGCGCCAGGTACCGGCTGAGCTGCTCGCTCCCGGGGCACGAGCTGGACGTGCGGGGCCTGGTGTGCTGTCTATATCCGCCGGGGGCCTTTGTGTCCGTGTCCCGAGACCGCACCACCCGCCTCTGGGCGCCGGACAGTCCTAACAGGGGTTTTACAGAAATGCACTGTATGAGTGGCCACTCTAATTTTGTATCTTGTGTATGCATCATACCCTCAAGTGACATATACCCTCATGGACTAATTGCCACTGGAGGAAATGACCACAATATTTGTGTTTTCTCACTGGACAGTCCGGTGCCACTTTATATTTTAAAAGGTCACAAAGATACAGTTTGCAGTCTTTCATCTGGAAAATTTGGAACATTACTTAGTGGCTCATGGGACACCACTGCTAAAGTCTGGCTGAATGACAAATGCATGATGACCTTACAGGGTCATACAGCTGCAGTATGGGCAGTAAAGATTTTACCTGAACAGGGCTTAATGTTAACTGGATCAGCAGACAAGACTATTAAACTGTGGAAGGCTGGAAGATGTGAGAGAACTTTTTCAGGGCATGAAGACTGTGTAAGAGGTTTGGCAATTTTGAGTGAAACAGAATTTCTTTCCTGTGCAAATGATGCTAGTATTAGAAAGTGGCAGATCACTGGAGAGTGTCTTGAGGTGTATTATGGACATACAAATTATATTTATAGCATATCTGTTTTTCCAAATTGCAGAGATTTTGTGACAACAGGAGAAGACAGATCTCTGAGGATATGGAAACATGGGGAATGTGCTCAAACAATTCGACTTCCAGCTCAGTCCATATGGTGCTGCTGTGTGCTAGACAATGGTGATATTGTGGTTGGTGCAAGTGATGGTATTATTAGAGTATTTACAGAATCAGTGGATCGCACAGCAAGTGCTGAGGAAATCAAGGCTTTTGAAAAAGAGCTGTCTCAGGCAACCATTGATACCAAAACTGGTGATTTAGGGGACATTAATGTTGAACAGCTTCCTGGGAGGGAACATCTGAATGAAGCTGGCACTAGGGAAGGACAGACTCGTCTCATCAGAGATGGGGAAAACGTTGAAGCCTTTCAGTGGAGTGTTAGTGAAGGGAGGTGGATGAAAATTGGTGATGTTGTTGGCTCATCTGGTGCTAATCAGCAAACATCTGGAAAAGTTTTATATGAAGGGAAAGAATTTGATTATGTTTTCTCAATTCATGTCAATGAAGGTGGACCAACATATAAATTGCCATATAATATCAGTGATGATCCCTGGATGACTGCATATAACTTCTTGCAGAAGAATGATTTGAATCCCATGTTTTTGGATCAAGTAGCTAAGTTTATTATTGATAACACAAAAGGTCAAATGTTGGGTCTTGGGAACACCAGCTTTTCAGATCCATTTACAGGTGGTGGTCGGTATGTGCCAGGCTCTTCTGGATCTTCCAGTACAGTGCCAACAGCAGATCCTTTCACAGGTGCTGGTCGTTATGTGCCAGGTTCTGTAAGTACGACCGCTGCTGTTACTGGAGTTGATCCATTTACAGGTAACAGTGCCTACCAGTCAGCTGGATCTAAAACAGTGAATATTTATTTCCCTAAAAAAGAGGCTGTCTCTTTTGACCAAGCAAACCCTACACAAATATTAGGAAAACTGAAGGAACTTAATGGAACTGCACCTGAAGAGAAGAAGTTAACTGAGGATGACTTGGTGCTTCTTGAAAAAATACTTTCTCTAATATGTGACAGTTCTTCAGAAAAACCCACAGCCCAGCAACTGCAGATATTGTGGAAAGCTATTAACTGGCCTGAAGACATTGTGTTTCCTGCACTGGACATTCTTCGATTGTCAATTAAGCATCCCAGTGTGAATGAGAACTTTTGCAATGAAAAGGAAGGGGCTCACTTCAGCAGACATCTTATCAGTCTTCTGAACCCTAAAGGAAAGCCAGCAAACCAGCTACTTGCTCTCAGGACTTTTTGCAATTGCTTTGTTGGCCAGGCAGGACAAAAGCTCATGATGTCCCAGAGGGAATCACTAATTTCCCATGCAATAGAACTGAAATCAGGGAACAATAAGAACATTCATATTGCTCTGGCTACACTGACCTTGAACTATTCCGTTTGTTTTCATAAAGACCATAACATTGAAGGAAAAGCTCAATGCTTGTCAGTAATTAGCACAATCTTGGAAGTTGTACAAGACCTGGAAGCCACTTTTAGACTTCTTGTGGCTCTTGGGACACTGATCAGTGATGATTCAAATGCTGTACAGTTAGCCAAATCTTTAGGTGTCGATTCACAAATAAAAAAGTATGCCTCAGTATCAGAACCAGCTAAAGTAAATGAGTGCTGTAGATTTATCCTAAATTTGCTGTAG

Related Sequences

XP_004838421.1 Protein

Plaa PREDICTED: phospholipase A-2-activating protein isoform X1 [Heterocephalus glaber]

Length: 795 aa      View alignments
>XP_004838421.1
MASSGARYRLSCSLPGHELDVRGLVCCLYPPGAFVSVSRDRTTRLWAPDSPNRGFTEMHCMSGHSNFVSCVCIIPSSDIYPHGLIATGGNDHNICVFSLDSPVPLYILKGHKDTVCSLSSGKFGTLLSGSWDTTAKVWLNDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKTIKLWKAGRCERTFSGHEDCVRGLAILSETEFLSCANDASIRKWQITGECLEVYYGHTNYIYSISVFPNCRDFVTTGEDRSLRIWKHGECAQTIRLPAQSIWCCCVLDNGDIVVGASDGIIRVFTESVDRTASAEEIKAFEKELSQATIDTKTGDLGDINVEQLPGREHLNEAGTREGQTRLIRDGENVEAFQWSVSEGRWMKIGDVVGSSGANQQTSGKVLYEGKEFDYVFSIHVNEGGPTYKLPYNISDDPWMTAYNFLQKNDLNPMFLDQVAKFIIDNTKGQMLGLGNTSFSDPFTGGGRYVPGSSGSSSTVPTADPFTGAGRYVPGSVSTTAAVTGVDPFTGNSAYQSAGSKTVNIYFPKKEAVSFDQANPTQILGKLKELNGTAPEEKKLTEDDLVLLEKILSLICDSSSEKPTAQQLQILWKAINWPEDIVFPALDILRLSIKHPSVNENFCNEKEGAHFSRHLISLLNPKGKPANQLLALRTFCNCFVGQAGQKLMMSQRESLISHAIELKSGNNKNIHIALATLTLNYSVCFHKDHNIEGKAQCLSVISTILEVVQDLEATFRLLVALGTLISDDSNAVQLAKSLGVDSQIKKYASVSEPAKVNECCRFILNLL