Sequence details NCBI ID: XM_004838324.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ccdc171
Gene Name coiled-coil domain containing 171
Entrez Gene ID 101717709

Database interlinks

Part of NW_004624736.1 (Scaffold)

For more information consult the page for NW_004624736.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC171 ENSCPOG00000012939 (Guinea pig)

Gene Details

coiled-coil domain containing 171

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011648, Guinea pig)

Protein Percentage 91.41%
CDS Percentage 93.37%
Ka/Ks Ratio 0.28646 (Ka = 0.0434, Ks = 0.1516)

CCDC171 ENSG00000164989 (Human)

Gene Details

coiled-coil domain containing 171

External Links

Gene Match (Ensembl Protein ID: ENSP00000370077, Human)

Protein Percentage 88.46%
CDS Percentage 91.05%
Ka/Ks Ratio 0.27861 (Ka = 0.06, Ks = 0.2153)

Ccdc171 ENSMUSG00000052407 (Mouse)

Gene Details

coiled-coil domain containing 171

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000056520, Mouse)

Protein Percentage 85.71%
CDS Percentage 83.7%
Ka/Ks Ratio 0.12568 (Ka = 0.0802, Ks = 0.6384)

Genome Location

Sequence Coding sequence

Length: 3984 bp    Location: 19706094..20063841   Strand: +
Raw sequence   
>XM_004838324.1
ATGAATATAAACACTTCACATAATGCCATTGGTGATACTCAAAGGTTGAAGAATCCCTCCTCAGATGTAAAACAATTGATTAAAAATGAAACAGACTTGGATATTACTGCTGATCTTAGAAAGAAACTCCATTGGGCTAAGAAAGAAAAATTAGAAATGACAACTAAGCACAATGCAGAGCTGTCAAGCTATGAGAGCCAGATTGCCAAGCTACGGTCTGAGGTTGAAAAAGGAGAAGCATTTCGACAGAGTCTGGAGTATGACCTGGCTGTCGCTAGAAAGGAAACTGGTCTTGGAAGACGGGCTGCAGAAGAGAGGTTAGCTGAGGCATGTAGGATCCAAGAAGAACTCTGTACTCAGAATTCAGAACTTCAAGAAAAAGCAAATGGGATTGAGAAGGTATTTCAGACTTCCCAACAGAAATGGAAAGAAGAATGCAGAAGATTTGAACGTGACTTGGAAGAAAGAGATAATATAATTCAAAATTGCAATCAAGAATATGATTTACTTATGAAGGAAAAAAGTAGACTGGAAAAAACTCTACAGGAAGTGTTGGAAAAACATCAACTGGAGAAGAGTAAGATGGAGTCACATGTCAGGGAGACTGCACTGGAGGAGTTTAGATTACAAGCCGAGCAATGGGATGTGGAGAGAAGAGAGTTACAATTTATAGTACAGGAGCAAGATAGTGCTGTACAGAATATGCACAAGAAAGTAGAACAATTAGAGAGAGAACATATGGAGTGCTCTAACCTTTTACAGCGACAAACAAGTGAACTTGAATTTAGTACTCAACGAGAAGAATGTCTTAGAAAAGAATTTGAGGCAACAACCCTCAGAGTGAGAAAATTAGAAGAAAACATTGAAGTGGAAAGAGCAGCACATTTGGAATCAAAATTTAATTCTGAAATTATTCAGTTACGGATTCGAGACCTTGAAGGAGCTTTGCAAGTAGAAAAGGCTAGCCAAGCAGAAGCTGTTGCTGATTTGGAAATGATCAAGAATGAATTCAAAGAAGTTGAAAGTGCATATGAGCGAGAAAAGCATAATGCACAAAAGAGCTTTGAAAAACTAAATTTGTTAGAAAGAGAGTATTTCTCCAAAAATAAGAAACTAAATGAAGAGATCGAGCAACAGAAGCAAGTAATTATAGATCTTTCAAAGAGACTTCAGTATAATGAAAAAAGTTGCAGTGAATTACAAGAAGAACTTGTAATGGCTAAGAAGCACCAGGCCTTCCTAGTAGAGACATGTGAAAATAATGTGAAAGAATTAGAATCGATCTTGGACAGCTTTACTGTGTCGGGCCAGTGGACATCAGGCATCCACAAGGACAAAGATAAACCTCCCAGCTTCTCTGCTGTCCTTGAGACTTTGAGGTGTACCTTGACAGATTACCAGAGCAAGCTAGAAGATGCATCTAATGAGGAAAAGGCATCTAATGAACTTGATTCCACCAAACTGAAGATTGAATTTCACACTAAAAATATAAAGGAACTTCAAGATAAACTGGCTGAAGTCCGTAAAGAGTTAAGTCATTTACGCACTAAATGTGCAGACCGAGAAGCTTTAATAAGCACTTTAAAAGTAGAACTACAAAATGTGCTGCACTGTTGGGAGAAAGAAAAGTCACGAGCAGCCCAATATGAAAGTGAACTTCAGAAGCTGTCCCAGGCTTTCCATAAGGACACTGAGGAGAAGCTAACCTTCCTTCATACCTTGTATCAACACTTGGTAGCCGGCTGTGTGCTCATGAAACAACCAGAAGGCATGTTGGATAAATTCTCCTGGTCTGAGCTTTGTGCAGTCTTGCAGGAGAATGTTGATGCCCTTGTTGCAGACCTCAACAGGGCTAATGAGAAGGTAAGCCATCTAGAGTATATCTGTAAAAATAAGTCGGACACAATGAGAGAACTTCAACAAACCCAGGAAGACACCTTTAACAAAGTGGCCGAACAGATCAAAGCCCAAGAGAGCTGCTGGCACAAACGAAAGAAGGAACTGGAATTACAGTATTCTGAACGTTTGCTGAAGTTGCAAAAGAGGGCACAGAAATTTCAAGAAATTGCAGAAAAAAATATGGACAAATTGAACTATATTGAGAAGTCACATGCACAGTTAATTCTTGAAAATTCACAGTTCAAAAATGTGTTGTCAAAGACTCAAAGGGAGCAGACATCCTTGCTGGCAGCCTGTGCATTGATGGCTGGTGCATTGTATCCCCTCTATAGCAGATCATGTGCCTTGTCTACACAGAGAGATTTTCTCCAGGAGCAGGTCAACACTTTTGAATTGTTCAAATTGGAAATTAGAACTTTAGTTGAAGCATTGTCAGCAGTAGAGGAAAAGAAGCAAGAGGAAGCCAAGATGAAGAAAAAACCATTCAAAGGATTGATACGTGTATTCCGGAAAGGTGTTATTGCAATTTTGGCAGCAAACAGACTCAAGATTTTGGGCCAATCATGTGGCTCTCTTTTTACTTGGATGGAAAGTTTCAAAGAAGGCATAGGCATGTTAGTGTGTACAGGAGAGCCCAAAGACAAGCTTAAATTTCCAAAACATCAAAAGGAGCAGTTATGTTGTTTGCAAGCACTCAGTTGGCTCACCAGTTCTGATCTTCTTGCTGCAATAATCAGTTCTATGGCTGAGTTACAAGAAGTCATTAGTAAAACAGATCCAAACTCCAGAATTTGTGGTCATTTACTCATAAGCACAGCCAAGAATTCATTTGCAAAACTCATGGATAAAATTAGTCTGGCAATGGAGAGTATACCTTTGCATAGTAGCAGGAGTATTACATATGTAGAAAAAGATTCCTTGGTTCAGAGGCTGACCCGTGGACTTCATAAAGTAAACACACTGGCCCCGAAATATGGATTGCGTGGCCATGTTCCCATTATGAAAAGCATAGCATCATTACAAAAGCAAATATTTGGATTCACACAAAGACTGCATGCAGCGGAAGTAGAGCGTCGCTCACTTCGCCTAGAGGTCTCGGAATTCAAACGAAATACGAATGAAATGAAAAAGGAGCTTGACAAAATCAGGGGTCTCCAAATGCAATTGAATGACTGTAAGCACTCTAAATTGATCACCCATGAGAAGTTTGAAAGTGCATGTGAAGAACTAAATAATGCATTACTTCGGGAACAGCAGGCACAAATGCTGTTGAATGAACAGGCCCAGCAACTACAGGAATTAAATTGTAGACTTGAATTGCACTCCAGTGAGGAGGCTGACAAAAACCAAACTCTTGGGGAAGCTGTTAAGTGTCTCTCCGAGGCAAAGATGGAGCTGAGAAGAAAAGATCAATCTCTGCGTCAGCTCAATAGACATCTTACCCAGCTGGAGCAGGACAAGCGTCGGCTGGAGGAGAACATCCGTGATGCAGAGAGTGCCCTCCGCATGGCAGCCAAAGACAAAGAATGTGTTGTTTATCATATGAGAACAGTAGGAAGTATGCTTCGTAAGGTCAGAGATCAGATCTCGCTGTCACGGAGCGCAGCAAGTAGGAATGACTTCGCCCTGCAGCTGCCCAAACTGCACCTGGAGACCTTTGCAATGGAGGGGCTCAAGGGCAGGCCAGAGGTTGTAGCATGCCAGGCTATGATTAAAAGTTTCATGGACATCTACCAGCTTGCAAGCGCTAGAATTGCTACGTTAGAGAAGGAAATGACATCTCATCGAAGTCACATTGCAACCTTGAAATTAGAGCTGCATACAGCTTGTTTACGTGAAAATGAAAGTTTACAATCAACAGGATCACGGAACCACTCGAATCTCTCCATTCCTTCAAGAGCTGCTCTTCCTGCTGACACAGTTGGTGTGGGGAATTTTTTGTCATTGCAAGCTGAACTTGATACAACTTATGCATTCTTAAAGGAGACATTTATAAATACTGCACCCCATGCTCTAACATCACCTCGCTCCTTTCCAGTAACTATGTCTGCTAGTGTCAAAGGACCAACTCAGATTGGATTATGA

Related Sequences

XP_004838381.1 Protein

Ccdc171 PREDICTED: coiled-coil domain-containing protein 171 [Heterocephalus glaber]

Length: 1327 aa      
>XP_004838381.1
MNINTSHNAIGDTQRLKNPSSDVKQLIKNETDLDITADLRKKLHWAKKEKLEMTTKHNAELSSYESQIAKLRSEVEKGEAFRQSLEYDLAVARKETGLGRRAAEERLAEACRIQEELCTQNSELQEKANGIEKVFQTSQQKWKEECRRFERDLEERDNIIQNCNQEYDLLMKEKSRLEKTLQEVLEKHQLEKSKMESHVRETALEEFRLQAEQWDVERRELQFIVQEQDSAVQNMHKKVEQLEREHMECSNLLQRQTSELEFSTQREECLRKEFEATTLRVRKLEENIEVERAAHLESKFNSEIIQLRIRDLEGALQVEKASQAEAVADLEMIKNEFKEVESAYEREKHNAQKSFEKLNLLEREYFSKNKKLNEEIEQQKQVIIDLSKRLQYNEKSCSELQEELVMAKKHQAFLVETCENNVKELESILDSFTVSGQWTSGIHKDKDKPPSFSAVLETLRCTLTDYQSKLEDASNEEKASNELDSTKLKIEFHTKNIKELQDKLAEVRKELSHLRTKCADREALISTLKVELQNVLHCWEKEKSRAAQYESELQKLSQAFHKDTEEKLTFLHTLYQHLVAGCVLMKQPEGMLDKFSWSELCAVLQENVDALVADLNRANEKVSHLEYICKNKSDTMRELQQTQEDTFNKVAEQIKAQESCWHKRKKELELQYSERLLKLQKRAQKFQEIAEKNMDKLNYIEKSHAQLILENSQFKNVLSKTQREQTSLLAACALMAGALYPLYSRSCALSTQRDFLQEQVNTFELFKLEIRTLVEALSAVEEKKQEEAKMKKKPFKGLIRVFRKGVIAILAANRLKILGQSCGSLFTWMESFKEGIGMLVCTGEPKDKLKFPKHQKEQLCCLQALSWLTSSDLLAAIISSMAELQEVISKTDPNSRICGHLLISTAKNSFAKLMDKISLAMESIPLHSSRSITYVEKDSLVQRLTRGLHKVNTLAPKYGLRGHVPIMKSIASLQKQIFGFTQRLHAAEVERRSLRLEVSEFKRNTNEMKKELDKIRGLQMQLNDCKHSKLITHEKFESACEELNNALLREQQAQMLLNEQAQQLQELNCRLELHSSEEADKNQTLGEAVKCLSEAKMELRRKDQSLRQLNRHLTQLEQDKRRLEENIRDAESALRMAAKDKECVVYHMRTVGSMLRKVRDQISLSRSAASRNDFALQLPKLHLETFAMEGLKGRPEVVACQAMIKSFMDIYQLASARIATLEKEMTSHRSHIATLKLELHTACLRENESLQSTGSRNHSNLSIPSRAALPADTVGVGNFLSLQAELDTTYAFLKETFINTAPHALTSPRSFPVTMSASVKGPTQIGL