Details from NCBI annotation

Gene Symbol Kdm4c
Gene Name lysine (K)-specific demethylase 4C, transcript variant X2
Entrez Gene ID 101698040

Database interlinks

Part of NW_004624736.1 (Scaffold)

For more information consult the page for NW_004624736.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

KDM4C ENSCPOG00000004700 (Guinea pig)

Gene Details

lysine (K)-specific demethylase 4C

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004232, Guinea pig)

Protein Percentage 93.46%
CDS Percentage 93.06%
Ka/Ks Ratio 0.16282 (Ka = 0.0333, Ks = 0.2043)

KDM4C ENSG00000107077 (Human)

Gene Details

lysine (K)-specific demethylase 4C

External Links

Gene Match (Ensembl Protein ID: ENSP00000370710, Human)

Protein Percentage 90.16%
CDS Percentage 89.46%
Ka/Ks Ratio 0.16817 (Ka = 0.0545, Ks = 0.324)

Kdm4c ENSMUSG00000028397 (Mouse)

Gene Details

lysine (K)-specific demethylase 4C

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030102, Mouse)

Protein Percentage 85.09%
CDS Percentage 84.51%
Ka/Ks Ratio 0.15122 (Ka = 0.0838, Ks = 0.5541)

Kdm4c ENSRNOG00000006644 (Rat)

Gene Details

lysine (K)-specific demethylase 4C (Kdm4c), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009083, Rat)

Protein Percentage 84.82%
CDS Percentage 84.25%
Ka/Ks Ratio 0.15387 (Ka = 0.0867, Ks = 0.5638)

Genome Location

Sequence Coding sequence

Length: 3144 bp    Location: 11253982..11711323   Strand: +
>XM_004838272.1
ATGGAGATGGTGGAGGCAGAGAGTCCCCTGAACCCCAGCTGTAAGATAATGACCTTCAGACCCTCCATGGAGGAATTCCGGGAGTTCAACAAATACCTCGCGTACATGGAATCTAAAGGAGCCCACCGAGCCGGCCTTGCCAAGGTGATTCCTCCTAAGGAATGGAAGCCAAGGCAATGCTATGATGACATTGATAATTTGCTTATTCCAGCACCAATTCAGCAGATGGTCACAGGGCAGTCGGGACTGTTCACTCAATACAACATCCAGAAAAAAGCCATGACCGTGAAGGAGTTCAGGCAGCTGGCTAACAGTGGCAAATATTGTACCCCAAGATATTTGGACTATGAAGATTTGGAGCGCAAGTACTGGAAGAATTTAACTTTCGTGGCACCCATCTATGGTGCAGATATTAATGGGAGCATATATGATGAGGGTGTGGATGAATGGAACATCGCTCGCCTTAATACAGTCTTGGATGTGGTTGAAGAAGAGTGTGGTATTTCGATTGAGGGTGTGAACACCCCCTATCTCTATTTCGGCATGTGGAAGACCACATTTGCGTGGCACACCGAGGATATGGACCTCTACAGCATTAATTATCTCCATTTTGGAGAGCCCAAGTCTTGGTATGCTATACCCCCGGAGCATGGAAAACGACTTGAAAGACTAGCTCAAGGTTTTTTCCCAAGCAGCTCCCAAGGGTGTGATGCATTTCTTCGCCACAAGATGACACTGATTTCTCCATCAGTATTGAAGAAATATGGGATTCCTTTTGACAAGATCACCCAGGAGGCTGGAGAATTTATGATCACTTTCCCATATGGCTATCATGCTGGTTTCAATCATGGTTTCAACTGTGCAGAATCTACAAATTTTGCCACTGTCAGGTGGATTGACTATGGAAAAGTTGCTAAATTGTGCACTTGCAGAAAAGACATGGTGAAAATTTCAATGGATATCTTTGTGAGGAAATTTCAGCCCGACCGATATCAGCTTTGGAAACAAGGAAAGGATATATACACCATTGATCACACGAAGCCTACTCCAGAATCCACCCCTGAAGTAAAAGCTTGGCTGCAAAGGAGAAGGAAAGTAAGAAAAGCATCCAAAAGCTTCCAAGGATCTAGGGCTCACCCTAAAAGGCCTAAGGCTGAGGAGGATGAAGATGTGTCAGCTGAAGTTGATGGGGTGGAGGTCCCTAACTCTGACCCTGGTGCAGAGGACCTCAAGGTCAGCAAACAGCCAGAAAAAGCAGCACAGCTGGGGAACATAGAAGCCCCTCCCAGAGAGGCCACTGCTAGGACAACACAGGTGCATCCAAACTTAGTGGCTAATGCCACACTCTCAGGAAACAGCTGCTTAAGTACATCCATTCCGGAGGAAATAAAAACTGAAGGTGATAAAGCCCATGGCATAACCACACCATCCACACCCCCTGAGGCTGATGACTCCGTAGTGGTGCAGGAACCAGACCCACCTACGCTCCCATGGCCAAAGTCACCTGAGTCATGTTCCTCTGTGGCAGAGAGTAATGGCTTGGTTACAGAGGAAGAAGAAAGTGATGTGGAGGGCCATAGGAGTGACCTGAAACCTGGGGAAATCTCAGCAGTTCTCAGTGAAGAGAGAAATGGCTTCAAAGTCCCCAGTGTAATAGAGGGAGAGGCCAAAACTTCTAAGAGTTGGCGCCATCCACTTAGTAAGCCTCCAGCCAGGTCCCCAATGACTCTTGTGAAGCTGCAGGCAGCAAGTGATGAAGAATTGCCTGAGGTTTCATCAATAGAAGAGGAAGTGGAAGAAACAGAGTCTTGGGCAAAGCCTCTCATCCACCTTTGGCAGACAAAGTCCCCTAACTTTGTGGCTGAGCAGGAGTATAATGCAACCGTAGCGAAAATGGAGCCACACTGTGCTATTTGCACCCTGCTTATGCCATACTACAAGCCAGATAGCAGCAATGAAGAAAATGATTCTAGATGGGAGACAAAATCAGATGAAGTGGTTATGTCTGGAGGAAAGACTAAGCCCCTCATTCCAGAGATGTGTTTTATTTATAGTGAAGAAAATATAGAATATTCTCCACCCAGTGCCTTCCTTGAAGAGGATGGAACAAGTCTTCTGATTTCCTGTGCAAAGTGCTGTGTACGGGTTCATGCAAGTTGTTACGGTGTCCCTTCTCATGAGATCTGTGATGGATGGCTGTGCGCCCGGTGCAAAAGAAATGCGTGGACAGCAGAATGCTGTCTCTGCAATCTGAGAGGGGGTGCTCTTAAGCAAACTATGAACAATAAGTGGGCCCATGTCATGTGCGCTGTTGCAGTCCCAGAAGTTCGATTCACTAATGTCCCAGAAAGGACACAAATAGATGTAGGCAGAATACCTTTACAGAGGTTGAAATTGAAATGCATGTTCTGCAGACACCGGGTTAAGAAGGTCTCTGGAGCCTGCATTCAGTGTTCCTATGGCCGTTGCCCAGCTTCCTTCCACGTCACGTGTGCCCATGCCTCGGGGGTACTGATGGAACCTGATGACTGGCCTTATGTGGTGAACATCACGTGCTTCCGACACAAGGTCAACCCAAATGTGAAGTCTAAGGCATGTGAGAAGGCCATCTCCGTGGGCCAGACAGTCATCACAAAGCATCGGAACACCCGCTACTACAGCTGCAGGGTGATGGCTGTAACGTCACAGACCTTCTATGAGATCATGTTTGACGATGGCTCCTTCAGCAGAGACACATTTCCTGAGGACATCGTGAGTAGAGACTGCCTGAAGCTGGGCCCTCCTGCAGAGGGAGAAGTCGTCCAAGTGAAGTGGCCCGATGGCAAGCTCTATGGGGCAAAATATCTCGGATCAAATGTTGCCTACATGTACCAGGTTGAGTTTGAAGATGGATCGCAGATAGCAATGAAGAGAGAGGACATCTACACCTTAGATGAAGAGCTACCCAAGAGAGTAAAGGCTCGTTTCTCCACAGCCTCTGACATGCGATTTGAAGACACATTTTATGGAGCAGACATAATCCAAGGGGAGAGGAAGAGACAAAGAGTGCTCAGCTCCAGGTTTAAGAACGAGTATGTGGATGACCCTGTGTATCGCACTTTTTTGAAGAGTTCTTTCCAGAAGAAGTGTCAGAAGAGACAGTAG

Related Sequences

XP_004838329.1 Protein

Kdm4c PREDICTED: lysine-specific demethylase 4C-like isoform X2 [Heterocephalus glaber]

Length: 1047 aa      View alignments
>XP_004838329.1
MEMVEAESPLNPSCKIMTFRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQCYDDIDNLLIPAPIQQMVTGQSGLFTQYNIQKKAMTVKEFRQLANSGKYCTPRYLDYEDLERKYWKNLTFVAPIYGADINGSIYDEGVDEWNIARLNTVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVAKLCTCRKDMVKISMDIFVRKFQPDRYQLWKQGKDIYTIDHTKPTPESTPEVKAWLQRRRKVRKASKSFQGSRAHPKRPKAEEDEDVSAEVDGVEVPNSDPGAEDLKVSKQPEKAAQLGNIEAPPREATARTTQVHPNLVANATLSGNSCLSTSIPEEIKTEGDKAHGITTPSTPPEADDSVVVQEPDPPTLPWPKSPESCSSVAESNGLVTEEEESDVEGHRSDLKPGEISAVLSEERNGFKVPSVIEGEAKTSKSWRHPLSKPPARSPMTLVKLQAASDEELPEVSSIEEEVEETESWAKPLIHLWQTKSPNFVAEQEYNATVAKMEPHCAICTLLMPYYKPDSSNEENDSRWETKSDEVVMSGGKTKPLIPEMCFIYSEENIEYSPPSAFLEEDGTSLLISCAKCCVRVHASCYGVPSHEICDGWLCARCKRNAWTAECCLCNLRGGALKQTMNNKWAHVMCAVAVPEVRFTNVPERTQIDVGRIPLQRLKLKCMFCRHRVKKVSGACIQCSYGRCPASFHVTCAHASGVLMEPDDWPYVVNITCFRHKVNPNVKSKACEKAISVGQTVITKHRNTRYYSCRVMAVTSQTFYEIMFDDGSFSRDTFPEDIVSRDCLKLGPPAEGEVVQVKWPDGKLYGAKYLGSNVAYMYQVEFEDGSQIAMKREDIYTLDEELPKRVKARFSTASDMRFEDTFYGADIIQGERKRQRVLSSRFKNEYVDDPVYRTFLKSSFQKKCQKRQ