Sequence details NCBI ID: XM_004838229.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Glis3
Gene Name GLIS family zinc finger 3, transcript variant X1
Entrez Gene ID 101712203

Database interlinks

Part of NW_004624736.1 (Scaffold)

For more information consult the page for NW_004624736.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GLIS3 ENSCPOG00000005523 (Guinea pig)

Gene Details

GLIS family zinc finger 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004975, Guinea pig)

Protein Percentage 92.7%
CDS Percentage 92.73%
Ka/Ks Ratio 0.18965 (Ka = 0.0367, Ks = 0.1934)

GLIS3 ENSG00000107249 (Human)

Gene Details

GLIS family zinc finger 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000371398, Human)

Protein Percentage 88.59%
CDS Percentage 87.94%
Ka/Ks Ratio 0.16519 (Ka = 0.0609, Ks = 0.3687)

Glis3 ENSMUSG00000052942 (Mouse)

Gene Details

GLIS family zinc finger 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000124635, Mouse)

Protein Percentage 84.81%
CDS Percentage 84.48%
Ka/Ks Ratio 0.17304 (Ka = 0.0854, Ks = 0.4938)

Glis3 ENSRNOG00000014768 (Rat)

Gene Details

Protein RGD1565505

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019816, Rat)

Protein Percentage 83.84%
CDS Percentage 84.52%
Ka/Ks Ratio 0.18389 (Ka = 0.0885, Ks = 0.4813)

Genome Location

Sequence Coding sequence

Length: 2796 bp    Location: 9005089..8553395   Strand: -
Raw sequence   
>XM_004838229.1
ATGAATGGAAGGTCACGCAGAATGAGTCTTCACCATACGTCGGGAACACCACAGGGGCCTAGGATGGTCAGTGGCCAACACATTCCTCCCATCCGAACCCACTCAGGGACTCCTGGCCCCTCGTCTTGTGGCAGCACACCAAGCCCTGCTTTTGGAAGCCCTTCTAACAGCCTGCATCGCAAGATGCCCTTGGGAGGAGGGATGGCTCTTCAGCACAATATGGCTGAGAGCCCCATCCATCTGCCCGCTCTGAGCCCCAGGAGACAAGTGCTCACCAATGAGAAGCCGACATTCCAGGTCACCCAGCCTGGAGGCATGTCAGGGACACACACTTTAAAGCCAAAGCATCAAGAGTTTGGAAGCCCTTTTCCTTCAAATCCTGGGAAAGGGGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCTGCAACAATCTAGTGGTCACCAGCAGTCCCATGATGGTTCAGCGACTGGGACCCATTTCACCTCCAGCAAGCCAGGTCTCCACAGCATGCAACCAGATCAGTCCTAGCTTACAGAGGGCAATGAATGCAGCCAACCTGAATATACCTCCTTCAGATACCAGGTCCCTTCTTTCCCGGGAGTCTCTGGCATCCACGTCTCTGAGCCTGACAGAGAGTCAGTCGGCCCTGAGTGTGAAACAAGAGTGGTCTCAGGGCTACAAGGCCCTCCCTTTGTTTTCTTCCAACCACGGCTCTCAGAATGGCGTGGATCTAGGGGACCTCCTTAGCCTTCCTCCGGGGACACCCATGTCCAGCAATAGCGTCTCTAATACATTGCCACCCTACCTTTTTGGCATGGAAAACAGCCACTCTTCTGCCTACCCTAGTCCCCGGCACTCGTCCTCCAGGTCACACTCAGCCCGCTCCAAGAAGAGAGCGTTGTCCTTGTCCCCACTGTCCGATGGCATTGGGATAGACTTCAATACCATCATCCGCACCTCGCCCACATCTTTGGTCGCCTACATCAACGGATCAAGGGCTTCCCCGGCCAACATGTCCCCGCAGCCAGAGGTATACGGGCATTTCCTGGGTGTGCGTGGCAGCTGCATCCCCCAGCCCTGCTCGGTGCCCAGTGGGCAGAAGGGCGTGCTGGTGGCCCCCGGGGGTCTGGCGCTGCCTGCCTATGGCGAGGATGGTGCGCTGGAGTACGAGCGCATGCAGCAGCTGGAGCACTGTGGCCTCCAGCCCAGGCCGGTCAACAACATGGTGGTGCAGCATGGGCTTCCTGGCCCTGAAGGCCAGCCCAGTGGCATGCTCAAGACCGAGCGCCTAGAGGAGTTCCCAGACAGTGCCCTGGACCTGGCCCCCGCGCCCCCTCTTCCTCCTCTGCCACAGCCCCAAGGCCCCCCACCCCCCTACCATGCCCACCCACGCCTTCACCACCCAGAGCTCCTGGCTCATGCCCAGCCCCTGGCCCTGCCCCAGGCCACTGTGGATGAAGACGGGGAGATGGACGAGGGAGGCAAGCACTGCTGTCGTTGGATAGACTGCAGCGCCTTGTATGACCAGCAGGAGGAACTTGTGCGGCACATCGAGAAGGTGCACATAGACCAGCGCAAGGGGGAAGACTTCACTTGCTTCTGGGCTGGCTGTCCTCGAAGGTATAAACCCTTCAACGCCCGCTATAAACTGCTGATCCACATGAGGGTCCACTCCGGGGAGAAGCCCAACAAGTGTACGTTTGAAGGTTGCAAGAAGGCCTTTTCCAGACTTGAGAACCTCAAGATTCATTTGCGGAGCCACACAGGCGAGAAGCCCTACCTGTGCCAGCACCCTGGCTGTCAGAAGGCATTCAGTAACTCCAGCGACCGTGCCAAGCACCAGAGGACACACCTGGACACTAAACCTTACGCTTGTCAAATTCCAGGATGCACCAAACGCTACACAGACCCAAGTTCTCTAAGAAAGCATGTGAAGGCACATTCTTCCAAAGATCAACAAGCAAGAAAAAAGCTGCGGTCCAGCACAGAGCTTCACCCAGACCTGCTCACAGATTGCCTTGCTGTGCAACCCCTGCAGCCAGCCGCTTCTCCGAGAGACACTGCTGCTGATACCAGCCTGGGACGGTCCCCAGGGCCGGGCCCAGACCTCTATCCAGCTCCCATTTTCTCCAGCAATCATTCGAGCCGAAGTGGAACAGCTGCTGGGGCCGGGCCACCCCCACACCTTGTCAGTCACCCTTCTCCAGGACATAATGTACAGGGGAGCCCCCACAACCCCTCCTCCCAGTTACCTCCACTCAGAGCTGTGGATGCAGGAGCTGAGAGGTTTGTTCCTTCTGCTCCTTCTCCTCACCACATCAGCCCCCAGAGAGTTCCTGCTCCTTCGTCCATACTGCAGAGAACGCAGCCTCCTCACAGCCAGCAGCCATCAGGTCCACACCTGAAGTCTTATCAGCCAGAGACAAACTCTTCTTTTCAGCCAAATGGAATCCACGTCCATGGATTTTATGGACAGCTGCAGACATTCTGCCCCCCACATTACCCTGAATCCCCCAGAACTGTGCCACCTGGCAACTCCTGCAGTGTGGTCCCTTCCTTCGAGGACTGCCTGGTCCCCACATCCATGGGCCAGGCTGGCTTTGATGTTTTCCACAGAGCCTTCTCGACTCACTCAGGCATTGCAGTGTATGACTTGCCTCCGGCTTCTTCAAGCCTCTTTGGGGAGTCTCTTCGCAGTGGGCCTGAGGACACAACATTCTTACAGATCAGCGCTGTAGACCGCTGTCCTAGCCAGCTTTCCTCCGTCTATACTGAAGGCTAA

Related Sequences

XP_004838286.1 Protein

Glis3 PREDICTED: zinc finger protein GLIS3 isoform X1 [Heterocephalus glaber]

Length: 931 aa      View alignments
>XP_004838286.1
MNGRSRRMSLHHTSGTPQGPRMVSGQHIPPIRTHSGTPGPSSCGSTPSPAFGSPSNSLHRKMPLGGGMALQHNMAESPIHLPALSPRRQVLTNEKPTFQVTQPGGMSGTHTLKPKHQEFGSPFPSNPGKGALGFGPQCKSIGKGSCNNLVVTSSPMMVQRLGPISPPASQVSTACNQISPSLQRAMNAANLNIPPSDTRSLLSRESLASTSLSLTESQSALSVKQEWSQGYKALPLFSSNHGSQNGVDLGDLLSLPPGTPMSSNSVSNTLPPYLFGMENSHSSAYPSPRHSSSRSHSARSKKRALSLSPLSDGIGIDFNTIIRTSPTSLVAYINGSRASPANMSPQPEVYGHFLGVRGSCIPQPCSVPSGQKGVLVAPGGLALPAYGEDGALEYERMQQLEHCGLQPRPVNNMVVQHGLPGPEGQPSGMLKTERLEEFPDSALDLAPAPPLPPLPQPQGPPPPYHAHPRLHHPELLAHAQPLALPQATVDEDGEMDEGGKHCCRWIDCSALYDQQEELVRHIEKVHIDQRKGEDFTCFWAGCPRRYKPFNARYKLLIHMRVHSGEKPNKCTFEGCKKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPYACQIPGCTKRYTDPSSLRKHVKAHSSKDQQARKKLRSSTELHPDLLTDCLAVQPLQPAASPRDTAADTSLGRSPGPGPDLYPAPIFSSNHSSRSGTAAGAGPPPHLVSHPSPGHNVQGSPHNPSSQLPPLRAVDAGAERFVPSAPSPHHISPQRVPAPSSILQRTQPPHSQQPSGPHLKSYQPETNSSFQPNGIHVHGFYGQLQTFCPPHYPESPRTVPPGNSCSVVPSFEDCLVPTSMGQAGFDVFHRAFSTHSGIAVYDLPPASSSLFGESLRSGPEDTTFLQISAVDRCPSQLSSVYTEG