Details from NCBI annotation

Gene Symbol Rfx3
Gene Name regulatory factor X, 3 (influences HLA class II expression), transcript variant X2
Entrez Gene ID 101711357

Database interlinks

Part of NW_004624736.1 (Scaffold)

For more information consult the page for NW_004624736.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RFX3 ENSCPOG00000000900 (Guinea pig)

Gene Details

regulatory factor X, 3 (influences HLA class II expression)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000811, Guinea pig)

Protein Percentage 95.5%
CDS Percentage 94.42%
Ka/Ks Ratio 0.27026 (Ka = 0.0355, Ks = 0.1314)

RFX3 ENSG00000080298 (Human)

Gene Details

regulatory factor X, 3 (influences HLA class II expression)

External Links

Gene Match (Ensembl Protein ID: ENSP00000371434, Human)

Protein Percentage 99.47%
CDS Percentage 96.4%
Ka/Ks Ratio 0.01915 (Ka = 0.0026, Ks = 0.1336)

Rfx3 ENSMUSG00000040929 (Mouse)

Gene Details

regulatory factor X, 3 (influences HLA class II expression)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000126313, Mouse)

Protein Percentage 98.4%
CDS Percentage 92.21%
Ka/Ks Ratio 0.02245 (Ka = 0.0075, Ks = 0.3363)

Rfx3 ENSRNOG00000014486 (Rat)

Gene Details

regulatory factor X, 3 (influences HLA class II expression) (Rfx3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023762, Rat)

Protein Percentage 89.52%
CDS Percentage 84.79%
Ka/Ks Ratio 0.15821 (Ka = 0.083, Ks = 0.5244)

Genome Location

Sequence Coding sequence

Length: 2250 bp    Location: 8300981..8003234   Strand: -
>XM_004838228.1
ATGCAGACATCAGAGACTGGGTCGGACACAGGTTCGACAGTGACTTTGCAAACATCTGTGGCTAGTCAAGCAGCAGTGCCTACACAGGTGGTGCAGCAAGTACCAGTCCAACAACAGGTACAGCAGGTACAGACTGTGCAGCAGGTACAACATGTCTATCCCGCTCAGGTGCAGTATGTGGAAGGAAGTGATACTGTCTATACCAATGGAGCAATCCGAACAACAACTTATCCTTACACAGAAACACAGATGTACAGCCAAAACACTGGAGGGAATTATTTTGATACTCAAGGGAGTTCTGCACAGGTGACTACCGTGGTCTCCTCCCACAGTATGGTGGGCACTGGTGGGATTCAGATGGGCGTCACTGGAGGACAACTCATCAGCAGCTCTGGAGGAACCTATCTGATTGGCAATTCAATGGAGAATTCTGGTCACTCAGTGACACACACAACTCGAGCCTCCCCAGCAACAATTGAAATGGCGATTGAGACGCTGCAAAAGTCTGACGGTCTATCCACTCACAGAAGCTCTCTTCTCAACAGCCATCTCCAGTGGCTATTGGACAATTATGAGACAGCAGAAGGAGTGAGCCTTCCCAGAAGCACTCTATACAACCACTACCTTCGACACTGTCAGGAACACAAACTGGACCCAGTCAATGCTGCTTCTTTTGGAAAATTAATAAGGTCAATTTTTATGGGGTTACGAACCAGGAGATTGGGCACTAGAGGGAACTCCAAGTACCATTACTATGGGATTCGTGTCAAGCCAGATTCCCCTCTTAATCGTCTGCAGGAAGACATGCAGTATATGGCTATGAGACAACAACCCATGCAACAGAAACAAAGGTACAAGCCTATGCAGAAAGTGGATGGGGTTGCAGATGGTTTCACAGGAAGTGGTCAACAGACAGGGACATCTGTTGAGCAAACTGTAATTGCCCAAAGTCAACATCATCAACAGTTTTTAGATGCATCGCGAGCACTTCCAGAGTTTGGAGAAGTTGAAATCTCTTCTCTGCCAGATGGTACTACCTTTGAGGATATCAAGTCACTACAGAGTCTTTATCGAGAACACTGTGAGGCAATACTGGATGTTGTTGTGAACCTTCAGTTTAGCCTGATAGAAAAATTGTGGCAAACATTCTGGCGCTATTCTCCCTCTACTCCAACTGATGGCACTGCCATTACTGAATCAAGCAATCTGAGTGAAATAGAAAGTCGACTTCCGAAAGCAAAGCTGATAACTCTGTGCAAACATGAGTCAATCCTGAAATGGATGTGTAACTGTGACCATGGGATGTACCAGGCTTTGGTGGAGATTCTCATCCCCGACGTCCTTAGACCTATTCCTAGTGCCTTGACCCAAGCCATTCGAAATTTTGCTAAAAGCCTTGAAGGTTGGCTTTCCAATGCCATGAACAATATTCCACAGAGAATGATACAAACCAAGGTTGCCGCTGTAAGTGCCTTTGCCCAGACTCTGCGAAGATACACATCGCTCAATCACCTGGCCCAGGCAGCTCGCGCAGTGCTTCAGAACACTTCCCAAATCAACCAGATGCTCAATGACCTCAACCGGGTCGACTTTGCCAATGTCCAGGAGCAGGCTTCCTGGGTGTGCCAGTGTGATGACAGCATGGTTCAGAGATTGGAAACAGACTTTAAGATGACTCTTCAGCAGCAGAGCACCCTGGAGCAGTGGGCTGCGTGGCTGGACAACGTGATGATGCAAGCACTAAAACCCTATGAAGGAAGACCCAGTTTTCCTAAAGCCGCTAGGCAATTTCTGCTGAAATGGTCTTTCTACAGCTCAATGGTTATTCGGGACTTAACCTTACGAAGTGCTGCTAGCTTTGGCTCCTTCCACTTGATCCGTCTACTCTATGATGAGTATATGTTTTACTTAGTAGAACATCGTGTTGCTCAGGCAACAGGAGAAACACCCATAGCAGTCATGGGCGAGTTTGGTGATTTAAATGCGGTGTCTCCTGGAAATCTGGATAAAGATGAAGGCAGTGAAGTGGAAAGTGAAATGGATGAAGAACTGGATGACTCTTCAGAACCTCAAGCCAAAAGAGAGAAAACAGAGCTGAGCCAGGCGTTCCCAGTGGGCTGTATGCAGCCCGTTCTCGAGACTGGCGTGCAACCAAGCCTCCTGAATCCAATCCACAGTGAGCACATCGTCTCAAGTACGCAGACTATCAGACAGTGCAGCGCTACAGGAAACACCTACACTGCAGTCTAA

Related Sequences

XP_004838285.1 Protein

Rfx3 PREDICTED: transcription factor RFX3 isoform X2 [Heterocephalus glaber]

Length: 749 aa      View alignments
>XP_004838285.1
MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVEGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTAITESSNLSEIESRLPKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLNDLNRVDFANVQEQASWVCQCDDSMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEFGDLNAVSPGNLDKDEGSEVESEMDEELDDSSEPQAKREKTELSQAFPVGCMQPVLETGVQPSLLNPIHSEHIVSSTQTIRQCSATGNTYTAV