Details from NCBI annotation

Gene Symbol Apba1
Gene Name amyloid beta (A4) precursor protein-binding, family A, member 1
Entrez Gene ID 101722004

Database interlinks

Part of NW_004624736.1 (Scaffold)

For more information consult the page for NW_004624736.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

APBA1 ENSCPOG00000003239 (Guinea pig)

Gene Details

amyloid beta (A4) precursor protein-binding, family A, member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002933, Guinea pig)

Protein Percentage 96.81%
CDS Percentage 94.28%
Ka/Ks Ratio 0.04748 (Ka = 0.0137, Ks = 0.2884)

APBA1 ENSG00000107282 (Human)

Gene Details

amyloid beta (A4) precursor protein-binding, family A, member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000265381, Human)

Protein Percentage 96.41%
CDS Percentage 91.71%
Ka/Ks Ratio 0.03202 (Ka = 0.0163, Ks = 0.51)

Apba1 ENSMUSG00000024897 (Mouse)

Gene Details

amyloid beta (A4) precursor protein binding, family A, member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000025830, Mouse)

Protein Percentage 93.19%
CDS Percentage 89.61%
Ka/Ks Ratio 0.05337 (Ka = 0.0324, Ks = 0.6066)

Apba1 ENSRNOG00000014928 (Rat)

Gene Details

amyloid beta (A4) precursor protein-binding, family A, member 1 (Apba1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020123, Rat)

Protein Percentage 93.89%
CDS Percentage 89.58%
Ka/Ks Ratio 0.05013 (Ka = 0.0318, Ks = 0.6346)

Genome Location

Sequence Coding sequence

Length: 2514 bp    Location: 3404937..3639414   Strand: +
>XM_004838169.1
ATGAACCACTTGGAGGGCTCCGCGGAGGTGGAGGTGCCCGACGAGGCGGCAGACGGGAAGGTGAACGAGTCGGTGGAGGCCGACCTGGAGCACCCCGAGGTGGAGGAGGAGCAGCCGGCCCCTCCGCTGCAGCACTACCCTGGCCGGCACCCGCGCGGGCGCGCCGTCGAGGACCTGCGGGGCGCGCAGCTTGGGCAGGAGGACGAGGAACGCGGAGAGAGCCTGGCACGCTCGGCCAGCACGGAGAGCGGCTTCCACAACCACACCGACACCGCCGAGGGCGACGTGATCGCCGCTGCCCGCGACAGCTACGATGCGGAGCGCGCGCAGGACGCGGAGGACGAGAGCGCGTACGCGGTGCAGTACCGCCCCGAGGCCGAGGAGTACACGGAGCAAGCGGAGGCCGAGCACGCCGAGGCCGCGCACCGCCGCTCGCTGCCCAACCACCTGCACTTCCACTCGCTGGAGCACGAGGAGGCCATGAACGCGGCCTACTCGGGCTACGTCTACACGCACCGGCTCTTCCACCGCGGCGAGGACGAGCCCTATGCCGAGCCCTACGCCGACTACGGCGGGCTACAGGAGCACGTGTACGAGGAGATCGGGGACGCGCCCGAGCTGGACGCGCGCGACGGCCTGCGGCTCTACGAGCAGGAGCGGGACGAGGCGGCAGCTTACCGCCAGGAGGCCCTGGGTGCGCGGCTGCACCACTATGACGAGCGCTCCGACGGCGAGTCCGACAGCCCCGAGAAGGAGGCCGAGTTTGCGCCCTACCCGCGTATGGACAGCTACGAGCAGGAGGAGGACATCGACCAGATCGTGGCCGAGGTGAAGCAGAGCATGAGCTCGCAGAGCCTGGACAAGGCGGCTGAGGACATGCCTGAGGCCGAGCAGGACCTGGAGCGTGCCCCCACCCCTGGCGAGGGCCGCCCGGACAGCCCGGGGCTGCAGACACCGGTGGGGCAGCCTCGAGCAGCTGGTTCCGCGGGCGGCGGCGAAGGAGGACAGCGGTACAGCAAGGAGAAGAGGGACGCCATCTCGCTGGCCATCAAGGACATCAAGGAGGCCATTGAAGAGGTGAAAACCAGGACCATCCGTTCGCCTTACACTCCCGACGAGCCCAAAGAGCCCATCTGGGTGATGCGCCAAGACATTAGCCCCACCAGGGACTGTGATGACCAGAGGCCAGTGGATGGAGATTCTCCATCTCCTGGCAGTTCCTCACCCCTGGGGGCAGAGTCGTCAAGTACACCCCTTCATCCCGGTGACCCTGAGGAAGCCTCCACAAACAAAGAGTCAAGAAAAAGCTTGGCTTCATTCCCAACCTACGTTGAAGTTCCTGGACCTTGTGACCCTGAAGACTTGATCGATGGAATCATTTTTGCTGCCAATTACCTTGGCTCCACCCAGCTGCTCTCAGACAAAACTCCCTCCAAAAATGTGCGCATGATGCAGGCACAGGAAGCAGTAAGCAGGATCAAGATGGCCCAGAAATTAGCCAAAAGCAGGAAGAAGGCTCCTGAAGGGGAATCTCAGCCCATGACTGAGGTGGATCTCTTCATCTCTACCCAGAGAATCAAAGTATTGAATGCCGACACGCAGGAGACGATGATGGACCACCCTCTGAGGACCATTTCCTACATTGCAGACATCGGGAATATTGTTGTGCTGATGGCCCGCCGGCGGATGCCCCGCTCCAACTCCCAGGAGAACGTGGAGGCTTCCCACCCCTCGCAGGATGGGAAGAGGCAGTACAAGATGATCTGCCACGTCTTTGAGTCTGAGGACGCCCAGCTGATTGCACAGTCCATAGGGCAGGCGTTCAGTGTTGCATACCAGGAATTCCTCAGGGCCAACGGGATTAACCCAGAAGACCTCAGCCAGAAGGAGTATAGTGACCTGCTCAACACCCAGGACATGTACAACGACGATCTGATCCACTTCTCCAAGTCGGAAAACTGCAAAGATGTTTTCATAGAGAAGCAGAAAGGAGAAATCCTGGGAGTTGTGATTGTGGAGTCCGGCTGGGGATCCATCCTGCCAACCGTGATCATAGCCAGCATGATGCATGGTGGCCCTGCAGAGAAGTCAGGGAAGCTGAATATCGGGGACCAAATTATGTCCATTAATGGCACCAGCCTGGTGGGCCTGCCTCTGTCCACCTGCCAGAGCATTATTAAGGGCTTAAAGAATCAGTCCCGAGTCAAGCTGAATATTGTGAGATGTCCTCCGGTGACCACCGTGTTAATCAGAAGGCCAGACCTTCGCTACCAACTGGGTTTCAGTGTCCAAAATGGAATTATCTGCAGCCTCATGCGAGGTGGAATAGCTGAGAGAGGTGGCGTCCGAGTGGGACATCGGATCATTGAAATCAACGGGCAGAGTGTGGTGGCCACGCCCCATGAGAAGATTGTCCACATCCTCTCCAATGCTGTCGGGGAGATCCACATGAAGACGATGCCAGCTGCCATGTACAGACTGCTGACAGCCCAGGAGCAGCCCGTTTATATCTGA

Related Sequences

XP_004838226.1 Protein

Apba1 PREDICTED: amyloid beta A4 precursor protein-binding family A member 1 [Heterocephalus glaber]

Length: 837 aa      View alignments
>XP_004838226.1
MNHLEGSAEVEVPDEAADGKVNESVEADLEHPEVEEEQPAPPLQHYPGRHPRGRAVEDLRGAQLGQEDEERGESLARSASTESGFHNHTDTAEGDVIAAARDSYDAERAQDAEDESAYAVQYRPEAEEYTEQAEAEHAEAAHRRSLPNHLHFHSLEHEEAMNAAYSGYVYTHRLFHRGEDEPYAEPYADYGGLQEHVYEEIGDAPELDARDGLRLYEQERDEAAAYRQEALGARLHHYDERSDGESDSPEKEAEFAPYPRMDSYEQEEDIDQIVAEVKQSMSSQSLDKAAEDMPEAEQDLERAPTPGEGRPDSPGLQTPVGQPRAAGSAGGGEGGQRYSKEKRDAISLAIKDIKEAIEEVKTRTIRSPYTPDEPKEPIWVMRQDISPTRDCDDQRPVDGDSPSPGSSSPLGAESSSTPLHPGDPEEASTNKESRKSLASFPTYVEVPGPCDPEDLIDGIIFAANYLGSTQLLSDKTPSKNVRMMQAQEAVSRIKMAQKLAKSRKKAPEGESQPMTEVDLFISTQRIKVLNADTQETMMDHPLRTISYIADIGNIVVLMARRRMPRSNSQENVEASHPSQDGKRQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDLLNTQDMYNDDLIHFSKSENCKDVFIEKQKGEILGVVIVESGWGSILPTVIIASMMHGGPAEKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIKGLKNQSRVKLNIVRCPPVTTVLIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMPAAMYRLLTAQEQPVYI