Details from NCBI annotation

Gene Symbol Vstm5
Gene Name V-set and transmembrane domain containing 5, transcript variant X4
Entrez Gene ID 101706685

Database interlinks

Part of NW_004624735.1 (Scaffold)

For more information consult the page for NW_004624735.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VSTM5 ENSCPOG00000024881 (Guinea pig)

Gene Details

V-set and transmembrane domain containing 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015477, Guinea pig)

Protein Percentage 80.81%
CDS Percentage 85.08%
Ka/Ks Ratio 0.38901 (Ka = 0.1271, Ks = 0.3267)

VSTM5 ENSG00000214376 (Human)

Gene Details

V-set and transmembrane domain containing 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000386607, Human)

Protein Percentage 80.23%
CDS Percentage 84.5%
Ka/Ks Ratio 0.30239 (Ka = 0.1223, Ks = 0.4045)

Vstm5 ENSMUSG00000031937 (Mouse)

Gene Details

V-set and transmembrane domain containing 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000034413, Mouse)

Protein Percentage 76.16%
CDS Percentage 80.04%
Ka/Ks Ratio 0.24709 (Ka = 0.1537, Ks = 0.6221)

Vstm5 ENSRNOG00000010480 (Rat)

Gene Details

V-set and transmembrane domain containing 5 (Vstm5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013927, Rat)

Protein Percentage 79.65%
CDS Percentage 81.59%
Ka/Ks Ratio 0.22396 (Ka = 0.1319, Ks = 0.5888)

Genome Location

Sequence Coding sequence

Length: 549 bp    Location: 38460707..38458048   Strand: -
>XM_004838043.1
ATGAACTGTCAGGGTGTGTCACTGTACATTCCTCACTCCGCCATCAATGCCACTGTACAAGAAGACATCCTGCTGTCAGTTGACTACTACTGCCACGGGGTGCCCACCATCGAATGGAAGTACACATCCAACTGGGGCGAGCAGAAGATCGTGGAATGGAAACCAGGGACTCAGGTTAACATCTCTGAAAGCCACAAGGACAGAGTCTGCACCTTTGACAATGGCTCCATCCAGCTCTTCAGTGTTGGCGTGAGGGATTCTGGTTACTATGTCATCACCGTGACAGAGCACCTGGGGAGCAGCCAGTTTGGCTCCATCGTGCTGCATGTGTCTGAGATCCGCTATGAAGACCTCCACTTTGTTGCTGTCTTTATTGCTTTACTTGCTGCTGTGGCCGCAGTGTTAATCAGCCTCATATGGGTTTGTAATAGGTGTGCATATAAATTCCAGAGGAAGAGGAGACACAAACTTAAAGGTAACCTTCTGGGTCTTGTGATCATCTGTTCATGGTTTGAGGTCACAAGTGACACATGTTACTTATACCAATAA

Related Sequences

XP_004838100.1 Protein

Vstm5 PREDICTED: V-set and transmembrane domain-containing protein 5 isoform X4 [Heterocephalus glaber]

Length: 182 aa      View alignments
>XP_004838100.1
MNCQGVSLYIPHSAINATVQEDILLSVDYYCHGVPTIEWKYTSNWGEQKIVEWKPGTQVNISESHKDRVCTFDNGSIQLFSVGVRDSGYYVITVTEHLGSSQFGSIVLHVSEIRYEDLHFVAVFIALLAAVAAVLISLIWVCNRCAYKFQRKRRHKLKGNLLGLVIICSWFEVTSDTCYLYQ