Details from NCBI annotation

Gene Symbol Taf1d
Gene Name TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa, transcript variant X5
Entrez Gene ID 101701427

Database interlinks

Part of NW_004624735.1 (Scaffold)

For more information consult the page for NW_004624735.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TAF1D ENSCPOG00000002426 (Guinea pig)

Gene Details

TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002209, Guinea pig)

Protein Percentage 87.41%
CDS Percentage 91.11%
Ka/Ks Ratio 0.28273 (Ka = 0.0647, Ks = 0.2287)

TAF1D ENSG00000166012 (Human)

Gene Details

TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000410409, Human)

Protein Percentage 70.63%
CDS Percentage 80.79%
Ka/Ks Ratio 0.38444 (Ka = 0.1855, Ks = 0.4825)

Taf1d ENSMUSG00000031939 (Mouse)

Gene Details

TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000034415, Mouse)

Protein Percentage 67.15%
CDS Percentage 76.4%
Ka/Ks Ratio 0.22936 (Ka = 0.2114, Ks = 0.9215)

Taf1d ENSRNOG00000010921 (Rat)

Gene Details

TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D (Taf1d), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014605, Rat)

Protein Percentage 65.82%
CDS Percentage 75.39%
Ka/Ks Ratio 0.25669 (Ka = 0.2318, Ks = 0.9031)

Genome Location

Sequence Coding sequence

Length: 837 bp    Location: 38405882..38400349   Strand: -
>XM_004838026.1
ATGGATAAATCAGGCATGGATGCTGTTAATTATACAACATCTGATACAGCTGTGGAAATTGAAAACCAAAGTGATAGCTCTTCATCTGGTAGCAGCTTATTTAAAACACAGTGTGTACCTTCCTTACCTAAACGGACTCAAAGAAACCCCAGTAGGAAATTTGTTCATATACCTGAAAGTGTGCAAACAGATTCATCAAGTGACTCATCTATAGAGCCAAGACCATTGACTTTAAAAGCTATTTTTGAAAGATTCAAGAAAAAGAAGAAACGTAAAAAGAGAAAATACAAGCCAAAATTAACACCAAGGGGAAGACCAAAAGGAAGGAGAAACACTAGAAGGTCACAAATAGATAAAAAACAAATTAAAGACAAAGGACCTACATTTCCATTTTTACATTCTGAAGATGGAAGGAAACCATTACCTTGGAGGAAAATTTTAAGTTTTGAGCAAGCTGTTGCAAGAGGGTTTTTTAACTACATTGAAAAACTGAAGTATGAACACCACCTTAAGGAATCATTGAAACAAATGAATGTTGGTGAAGATTTAGAAAAAGAAGGTCTTGATAGTCGGAGATACAAATACTTGGATGATGATGGCTCCATTTCTCCTATTGAAGAGTCAGAAGCAGAAGATGAGACACATCTTGAACGTGGTGAATGTGATATCAAATTGGAAGAGAGTTGTTTCATAATAAGTTCTGAATTTCCAAACAAGATGAATATGTATTTACAACGAGAGAACAATAAAGAAGCTGCTTTGTCTATAAAGGGAGTTCCTAAGGCCAGAAATACTGGACAGAGGACAGAAGGGCCTGAAAAGGAGACAGACATGTGA

Related Sequences

XP_004838083.1 Protein

Taf1d PREDICTED: TATA box-binding protein-associated factor RNA polymerase I subunit D isoform X5 [Heterocephalus glaber]

Length: 278 aa      View alignments
>XP_004838083.1
MDKSGMDAVNYTTSDTAVEIENQSDSSSSGSSLFKTQCVPSLPKRTQRNPSRKFVHIPESVQTDSSSDSSIEPRPLTLKAIFERFKKKKKRKKRKYKPKLTPRGRPKGRRNTRRSQIDKKQIKDKGPTFPFLHSEDGRKPLPWRKILSFEQAVARGFFNYIEKLKYEHHLKESLKQMNVGEDLEKEGLDSRRYKYLDDDGSISPIEESEAEDETHLERGECDIKLEESCFIISSEFPNKMNMYLQRENNKEAALSIKGVPKARNTGQRTEGPEKETDM