Details from NCBI annotation

Gene Symbol Afp
Gene Name alpha-fetoprotein
Entrez Gene ID 101725205

Database interlinks

Part of NW_004624735.1 (Scaffold)

For more information consult the page for NW_004624735.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AFP ENSCPOG00000012470 (Guinea pig)

Gene Details

alpha-fetoprotein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011221, Guinea pig)

Protein Percentage 85.03%
CDS Percentage 86.84%
Ka/Ks Ratio 0.23194 (Ka = 0.082, Ks = 0.3536)

AFP ENSG00000081051 (Human)

Gene Details

alpha-fetoprotein

External Links

Gene Match (Ensembl Protein ID: ENSP00000379138, Human)

Protein Percentage 75.7%
CDS Percentage 82.92%
Ka/Ks Ratio 0.3492 (Ka = 0.141, Ks = 0.4037)

Afp ENSMUSG00000054932 (Mouse)

Gene Details

alpha fetoprotein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000041006, Mouse)

Protein Percentage 64.13%
CDS Percentage 73.17%
Ka/Ks Ratio 0.31212 (Ka = 0.2395, Ks = 0.7675)

Afp ENSRNOG00000002889 (Rat)

Gene Details

alpha-fetoprotein (Afp), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003879, Rat)

Protein Percentage 63.31%
CDS Percentage 72.23%
Ka/Ks Ratio 0.29776 (Ka = 0.2484, Ks = 0.8341)

Genome Location

Sequence Coding sequence

Length: 1830 bp    Location: 34092505..34072257   Strand: -
>XM_004838012.1
ATGAAGTGGCTGGTGTCACTTATTTTAATTTTCCTACTACGTTTTACTGACTCCAGAACACTGCATAAAAATGCATATGGAATAGCTTCCACATTGGATTCCTCCCAGTGTTCTTCAGAGATGAATTTGGCTGACATAGCTACCATATTCTTTGCCCAATTTGTCCAAGAAGCCACTTATGAGGAAGTAAGCAAAATGGTGACCGACTTATTGACTGTAGTCAAGAAACCCACTGGCAGTGAGCAGCCTGCAGAGTGTTTCGAAAACCGGCTATCTGCATTTCTGGAAGAAATCTGCCATGAGAGGGCAATTGCTGGAAAGTATGGACTTGCAGACTGCTGTGCCCACAGTGAAGAAGAAAGGCACAAGTGTTTTCTTGCACGGAAAAAGGCTGCTACAGTATCCATTCCACCCTTGCAAGCTCCAGATGTGGTTACAAGTTGTAAAGTATATGAAGAAAACAGGGAGATGTTCATAAACAAGTACATCTATGAGGTATCGAGGAGGCATCCCTTCCTGTACACACCTACAGCTCTCTCTTTGGCTGCTCGCTATGACAAAATATTTCCATCATGTTGCAAAGCTGAAAATGCAGCTGAATGTTTCCAAACACAGGCAACATCAATTACAAAAGATTTAAGTGAAAGCAGCTTATTAAATCAACATGTATGTGCAATAATCAGAAATTTTGGGCCTCGGAACTTCCAAGCCGTAACTATTACTAAACTGAGTCAGAAGTTTCCGAAAGCGAATTTTTCTGAAATTCAGAAACTGGTCCTGGATGTAGCCCACATCCATGAGGAATGCTGCCATGGAAACGTGCTGGAATGTCTGCATGATGGGGAGAAAATAATGTCGTACATCTGTTCTAAGCAAGACACTTTGTCCAGCAAAATAGCAGAATGCTGTAAATTGCCCCTCCTTGAACTCGGCCACTGCATAATCCATGCAGAAAACGATGACAAACCTGAGGGTCTCTCATCAGACCTGAGCAAGTTCCTAGGAGACAGAGATTTCGGCCGATTTTCCCCAGGGGAGAAAACAATGTTCTTGGCAAGTTTTATTCATGAATATTCACGGAGACATACTGAACTTGCTGTCTCAATAATACTAAGAGTTGCTAATGGATACCAGGAGCTATTGGAGAAGTGTTTCCAATCTGAAAACACTCTTGAATGCCAGAATAAAGGGGAACAAGAACTGCAGAAATATGTCCAGGAGAGTCAAACAATGGCAACTCGAAGCTGTAGCCTCTTCCAGAAACTTGGAGAATATTACCTGCAAAATGCGTTTCTCATTGCTTACACGAAGAAAGCCCCCCAGCTGACCTCATCCGAGCTGATGGCCTTCACCAGGAAAATGGTGACCACAGCAGCCACATGTTGTCAACTCAGTGGGGACAAGCAGTTGGCCTGTGGGGAAGGAGCGGCTGATCTTATTATTGGACAGTTGTGTATCAGACATGATGCAAGTCCCGTGAATCCTGGTGTGGGCATTTGCTGCAATTCTTCATATGCCAACAGAAGACCATGCTTCAGCAGTCTGGTGGTGGATGAAACATATGTCTCCCCACCATTTTCTGCTGACAAATTCATTTTCCATAAAGATCTGTGCCAAGCTCATGGTGTAGCACTACAAGAAATGAAGCAAGAGCTTCTCATTAATCTTGTGAAGCAGAAAGTGCAGATAACAGAGGGACAGCTTGAGACCATCATTCAAGATTTCTCTGGCTTTTTGGAGAAGTGCTGCCACCATCAGGAGCAGGAAGCCTGCTTTGCAGAAGAGGGCCCAAAACTGATTTCAAAAACTCGTACTTCTTTGGGAGTTTAA

Related Sequences

XP_004838069.1 Protein

Afp PREDICTED: alpha-fetoprotein [Heterocephalus glaber]

Length: 609 aa      View alignments
>XP_004838069.1
MKWLVSLILIFLLRFTDSRTLHKNAYGIASTLDSSQCSSEMNLADIATIFFAQFVQEATYEEVSKMVTDLLTVVKKPTGSEQPAECFENRLSAFLEEICHERAIAGKYGLADCCAHSEEERHKCFLARKKAATVSIPPLQAPDVVTSCKVYEENREMFINKYIYEVSRRHPFLYTPTALSLAARYDKIFPSCCKAENAAECFQTQATSITKDLSESSLLNQHVCAIIRNFGPRNFQAVTITKLSQKFPKANFSEIQKLVLDVAHIHEECCHGNVLECLHDGEKIMSYICSKQDTLSSKIAECCKLPLLELGHCIIHAENDDKPEGLSSDLSKFLGDRDFGRFSPGEKTMFLASFIHEYSRRHTELAVSIILRVANGYQELLEKCFQSENTLECQNKGEQELQKYVQESQTMATRSCSLFQKLGEYYLQNAFLIAYTKKAPQLTSSELMAFTRKMVTTAATCCQLSGDKQLACGEGAADLIIGQLCIRHDASPVNPGVGICCNSSYANRRPCFSSLVVDETYVSPPFSADKFIFHKDLCQAHGVALQEMKQELLINLVKQKVQITEGQLETIIQDFSGFLEKCCHHQEQEACFAEEGPKLISKTRTSLGV