Details from NCBI annotation

Gene Symbol Puf60
Gene Name poly-U binding splicing factor 60KDa, transcript variant X1
Entrez Gene ID 101711469

Database interlinks

Part of NW_004624735.1 (Scaffold)

For more information consult the page for NW_004624735.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PUF60 ENSCPOG00000014613 (Guinea pig)

Gene Details

poly-U binding splicing factor 60KDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013167, Guinea pig)

Protein Percentage 94.72%
CDS Percentage 92.11%
Ka/Ks Ratio 0.17784 (Ka = 0.0399, Ks = 0.2243)

PUF60 ENSG00000179950 (Human)

Gene Details

poly-U binding splicing factor 60KDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000434359, Human)

Protein Percentage 99.11%
CDS Percentage 92.01%
Ka/Ks Ratio 0.01016 (Ka = 0.0042, Ks = 0.4122)

Puf60 ENSMUSG00000002524 (Mouse)

Gene Details

poly-U binding splicing factor 60

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000098096, Mouse)

Protein Percentage 99.29%
CDS Percentage 90.72%
Ka/Ks Ratio 0.00776 (Ka = 0.0035, Ks = 0.4457)

Puf60 ENSRNOG00000009960 (Rat)

Gene Details

poly-U binding splicing factor 60 (Puf60), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000053317, Rat)

Protein Percentage 99.29%
CDS Percentage 90.84%
Ka/Ks Ratio 0.00785 (Ka = 0.0034, Ks = 0.4384)

Genome Location

Sequence Coding sequence

Length: 1695 bp    Location: 12983112..12996576   Strand: +
>XM_004837793.1
ATGGCGACGGCAACCATAGCTCTCCAAGTCAATGGCCAGCAAGGAGGGGGATCCGAGCCGGCAGCGGCAGCGGCGGCGGCGGCGGCGGCAGTGGTGGCAGCGGGAGACAAATGGAAACCTCCACAGGGCACAGAATCCATCAAGATGGAGAATGGGCAGAGCACAGCTGCCAAGCTGGGACTGCCTCCCCTGACGCCTGAGCAGCAGGAGGCCCTCCAGAAGGCCAAGAAATATGCCATGGAGCAGAGCATCAAGAGTGTGCTTGTGAAACAGACCATCGCGCACCAGCAGCAGCAGCTCACCAACCTGCAGATGGCAGCAGTGACAATGGGCTTTGGAGATCCTCTCTCACCTTTGCAATCGATGGCAGCTCAGCGGCAGCGGGCACTGGCCATCATGTGTCGGGTCTACGTGGGCTCCATCTACTATGAGCTAGGGGAGGACACCATTCGCCAAGCCTTTGCCCCCTTTGGCCCCATCAAGAGCATTGACATGTCCTGGGACTCCGTCACCATGAAACACAAGGGCTTTGCCTTTGTGGAGTACGAGGTTCCAGAAGCCGCACAACTGGCCTTGGAGCAGATGAACTCAGTGATGCTGGGGGGCAGAAACATTAAGGTGGGCAGGCCCAGCAACATAGGACAGGCCCAACCCATCATAGACCAGCTGGCTGAGGAGGCACGGGCCTTCAACCGCATATATGTGGCATCTGTGCACCAGGATCTCTCAGATGACGACATCAAGAGTGTATTTGAGGCCTTTGGCAAGATCAAGTCTTGCACGCTGGCTCGGGACCCCACGACTGGCAAGCATAAAGGCTATGGCTTCATTGAGTATGAGAAGGCCCAGTCATCCCAGGATGCTGTGTCCTCCATGAACCTCTTTGATCTGGGTGGCCAGTATTTGCGAGTAGGCAAGGCTGTCACACCCCCCATGCCCCTGCTAACACCTGCTACTCCTGGAGGCCTCCCACCTGCTGCTGCTGTAGCTGCAGCTGCAGCCACAGCAAAGATTACAGCTCAGGAAGCAGTGGCTGGAGCAGCAGTGCTGGGTACTTTGGCCACGCCTGGACTGGTATCCCCAGCACTGACCCTGGCCCAGCCCTTGGGGGCTTTGCCTCAAGCTGTCATGGCTGCTCAGGCTCCTGGAGTCATCACAGGTGTGACCCCAGCCCGTCCTCCCATTCCGGTCACCATCCCTTCTGTGGGAGTGGTGAACCCCATCCTAGCCAGCCCCCCAACGCTGGGCCTTTTGGAGCCCAAAAAGGAAAAGGAAGAAGAGGAGCTGTTCCCGGAGTCAGAGCGGCCAGAGATGCTGAGTGAGCAGGAGCACATGAGCATCTCAGGCAGCAGTGCACGCCACATGGTCATGCAGAAGCTGCTTCGAAAGCAGGAGTCCACAGTGATGGTTCTCCGTAACATGGTGGATCCTAAGGACATCGATGATGACCTGGAGGGGGAGGTGACAGAAGAGTGTGGCAAGTTCGGTGCTGTCAATCGTGTCATCATCTACCAGGAAAAGCAGGGTGAGGAGGATGATGCAGAAATCATCGTCAAGATCTTTGTGGAGTTTTCCATGGCCTCAGAGACTCACAAGGCCATCCAGGCCCTCAATGGGCGCTGGTTTGCTGGCCGCAAGGTGGTGGCTGAAGTGTACGACCAAGAGCGTTTTGATAACAGCGACCTTTCTGCGTGA

Related Sequences

XP_004837850.1 Protein

Puf60 PREDICTED: poly(U)-binding-splicing factor PUF60 isoform X1 [Heterocephalus glaber]

Length: 564 aa      View alignments
>XP_004837850.1
MATATIALQVNGQQGGGSEPAAAAAAAAAAVVAAGDKWKPPQGTESIKMENGQSTAAKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAAVTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLATPGLVSPALTLAQPLGALPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEDDAEIIVKIFVEFSMASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA