Details from NCBI annotation

Gene Symbol Scrt1
Gene Name scratch homolog 1, zinc finger protein (Drosophila)
Entrez Gene ID 101723290

Database interlinks

Part of NW_004624735.1 (Scaffold)

For more information consult the page for NW_004624735.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SCRT1 ENSCPOG00000024058 (Guinea pig)

Gene Details

scratch homolog 1, zinc finger protein (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016244, Guinea pig)

Protein Percentage 94.89%
CDS Percentage 91.16%
Ka/Ks Ratio 0.09532 (Ka = 0.0377, Ks = 0.3959)

SCRT1 ENSG00000170616 (Human)

Gene Details

scratch homolog 1, zinc finger protein (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSP00000331692, Human)

Protein Percentage 93.08%
CDS Percentage 88.86%
Ka/Ks Ratio 0.04401 (Ka = 0.0326, Ks = 0.7399)

Scrt1 ENSMUSG00000048385 (Mouse)

Gene Details

scratch homolog 1, zinc finger protein (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000094093, Mouse)

Protein Percentage 93.95%
CDS Percentage 87.9%
Ka/Ks Ratio 0.03416 (Ka = 0.0289, Ks = 0.8449)

Scrt1 ENSRNOG00000025594 (Rat)

Gene Details

scratch homolog 1, zinc finger protein (Drosophila) (Scrt1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000030637, Rat)

Protein Percentage 93.95%
CDS Percentage 87.9%
Ka/Ks Ratio 0.03533 (Ka = 0.0288, Ks = 0.8158)

Genome Location

Sequence Coding sequence

Length: 1053 bp    Location: 12515650..12521433   Strand: +
>XM_004837730.1
ATGCCCAGGTCCTTCCTGGTCAAGAAGGTCAAACTTGACACGTTTTCTTCGGCAGACCTCGACAGCTCCTACGGGCGTGCCCGCAGCGACCTCGGAGCACGACTGCAAGATAAAGGATACCTCAGCGACTACGTGGGGCCAGCGTCCGTCTACGATGGCGACGCGGAGGCGGCGCTGCTCAAAGGGCCGTCCCCGGAGCCCATGTATGCTGCGGCTGTGCGGGGAGAGCTGGGGCCGGCGGCCTCAGGCTCGGCGCCACCGCCCACTCCGCGCCCGGAGCTGGCCACCGCCGCAGGCGGCTACATTAACGGCGACGCGGCTGTCAGCGAAGGCTATGCCGCCGATGCCTTCTTCATCACCGACGGGCGCTCACGCCGCAAGGCCGCCCACGCCAACGCGGCCGCGGCCCCCTCCACCGCTTCAGCGGCGGCCCCCGAACGCGATGCCGGCAGCGGGGGCGGGGCAGGAGCACGGGGTGCGGGGCCGGGGGCCGGGGGCCGGGGCGCGCGCACGGGGGCAGGCGCCGAGGCGCGTGCGGGGCCAGGCGCCTCGGGCGCTGCAGGCCGACACGCGTGCGGCGAGTGCGGCAAGACCTACGCCACATCGTCGAACCTGAGCCGCCACAAGCAGACGCACCGAAGTCTGGACAGCCAGCTGGCGCGGCGCTGCCCAACGTGCGGTAAGGTGTATGTGTCCATGCCGGCCATGGCCATGCACCTGCTCACGCACGACCTGCGTCACAAGTGCGGCGTGTGCGGCAAGGCCTTCTCCAGGCCCTGGTTGCTGCAGGGGCACATGCGCTCACACACAGGCGAGAAGCCTTTCGGTTGCGCGCACTGCGGCAAGGCCTTCGCAGACCGCTCCAACCTGCGTGCTCACATGCAGACGCACTCAGCTTTCAAGCACTTCCAGTGCAAGCGCTGCAAGAAGAGCTTCGCGCTCAAGTCCTATCTCAACAAGCACTACGAGTCGGCCTGCTTCAAGGGCGGCGCGGGCAGCGCAGCCGGCCCCGCGGCCCCCGCGCCGCCGCAGCTCAGTCCCGTGCAGGCCTAG

Related Sequences

XP_004837787.1 Protein

Scrt1 PREDICTED: transcriptional repressor scratch 1 [Heterocephalus glaber]

Length: 350 aa      View alignments
>XP_004837787.1
MPRSFLVKKVKLDTFSSADLDSSYGRARSDLGARLQDKGYLSDYVGPASVYDGDAEAALLKGPSPEPMYAAAVRGELGPAASGSAPPPTPRPELATAAGGYINGDAAVSEGYAADAFFITDGRSRRKAAHANAAAAPSTASAAAPERDAGSGGGAGARGAGPGAGGRGARTGAGAEARAGPGASGAAGRHACGECGKTYATSSNLSRHKQTHRSLDSQLARRCPTCGKVYVSMPAMAMHLLTHDLRHKCGVCGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSAFKHFQCKRCKKSFALKSYLNKHYESACFKGGAGSAAGPAAPAPPQLSPVQA