Details from NCBI annotation

Gene Symbol Slc39a4
Gene Name solute carrier family 39 (zinc transporter), member 4, transcript variant X3
Entrez Gene ID 101718493

Database interlinks

Part of NW_004624735.1 (Scaffold)

For more information consult the page for NW_004624735.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC39A4 ENSCPOG00000005741 (Guinea pig)

Gene Details

solute carrier family 39 (zinc transporter), member 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005178, Guinea pig)

Protein Percentage 85.89%
CDS Percentage 87.68%
Ka/Ks Ratio 0.2332 (Ka = 0.0811, Ks = 0.348)

SLC39A4 ENSG00000147804 (Human)

Gene Details

solute carrier family 39 (zinc transporter), member 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000301305, Human)

Protein Percentage 77.9%
CDS Percentage 80.94%
Ka/Ks Ratio 0.1815 (Ka = 0.139, Ks = 0.7657)

Slc39a4 ENSMUSG00000063354 (Mouse)

Gene Details

solute carrier family 39 (zinc transporter), member 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000073134, Mouse)

Protein Percentage 74.12%
CDS Percentage 78.08%
Ka/Ks Ratio 0.23297 (Ka = 0.1699, Ks = 0.7291)

Slc39a4 ENSRNOG00000014314 (Rat)

Gene Details

solute carrier family 39 (zinc transporter), member 4 (Slc39a4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000047376, Rat)

Protein Percentage 74.7%
CDS Percentage 78.3%
Ka/Ks Ratio 0.226 (Ka = 0.1659, Ks = 0.7339)

Genome Location

Sequence Coding sequence

Length: 1995 bp    Location: 12433491..12438403   Strand: +
>XM_004837714.1
ATGGTGATCCTAGTGCGGCTCACACCGGGACTACTGCTGCCCATGCTGCTGGTGTCGGTGACAATGGCCCAGCCCACCCATCTGCTGAGCTTGCTTACCTCAGGCCAGGGCGTTCTGGATCTGGAGGCGCTGAGCAGCCTGTTAAATACACTGGCGGACCGTGTGCACTGCTTCAACGGGCCGTGTGGAAAGTGCCTGTCTGTGGAGGATGCCTTGGCTCTGGGCAAGCCAGACAAGCCAGACCTCACCCCAGCAACAGTCCTGCCGTCCAGATTCATCGTGCGCCTCAGTGCCGCCATGGCCCTCTACCTTAGCAACCCAGAGGGTACATGTGCCGACATCCAGGCTGGCCGATGGGCCTCCTGTGCTGACAACTTCCTGCACCTGCTTGAAAGTCCTGAGGCCATGACCCCAGGCCTGAACCAGTTGCTCCAGAGGATCGAGGCCCATGCTGTCAGGAAGCTCACTAGGGAGAAGACTTGTATAGAAGTCCCTCAGCTGCTGCAGGAGGTGGTAGGAGCAGGGGCTCCCAGCAGTCCTGGCCCAGTCCTAGCCGCCCTCCTGGACCATGTCAAGAGTGGGGCCTGCTTCCACGCCCTGCCGAGTCCTCAGTACTTTGTAGACTTCGTGTTCCGGCAGCACAGCAGTGAGGCTCCCAATATGACCCTGGCTGAGCTGGAGGCTTTGATGCAGCACCTGGGGGTGGGCGGAGAGGCCCATGGTGACCACCATGACCATGATGACCGCAGTCAGCTGGGCAGAGAGGCCAATCACCAGGACCCTGTGCCCCTTGATGCCCTCAACAACAGCTCCAGTGTGTGGGACACGGTATGCCTAAGTGCCAGGGATGTGATGGCTGTGTATGGACTGTCTGAGCAGGCTGGGGTGAGCCCTGAGGCCTGGGCTCAAATTAGCCCTGCCCTACTCCAGCAGCAGCTGAGTGGGGCCTGCAACCCCCAGCCCAAGTCCCCTACCCAAGACCAACTCAGCCAGGCAGAGAGGTACCTGTACGGCTCTCTGGCCACCCTGCTCATCTGCCTCTGTGCAGTGTTCGGACTCCTGCTGCTGACCTGCACCAGCTGCAGCACAGTCACGCACTATGTCATGCAGACTTTCCTGAGCTTGGCTGTGGGCGCACTCACTGGCGATGCCCTGCTGCACCTGACACCCAAGGTGCTGGGACTGCACACACACGGCCATGGTGCAGAGGACCACGAGCACCAAGAGGGTGTGGGCGCACAGGTCACCTGGCGCCTGCTGGCCATACTTGGAGGCCTCTACCTCTTCTTCTTGTTTGAGAGCCTCTTCAGCCTCCTGCTGCCCAGGGACCAGGACCCAGAAAAGGCCAGGCCCTGCACTCACAGCAGCCACAGCCACGGGGGCCACAGCCACAGCACATCCCTGCAGCTGGCACCCAGAGAGCTCTGGCAGCCCAAGCAGCCCCATGAGGGCTCCCGCACCGACCTGGTAGCCGAAGAGAGCCCGGAGCTACTGCATCCGGAGCCCCGGAGGCTGAACCCAGACCTGAGGCTGCTGCCATACCTGATCACGCTGGGCGACGCCGTGCACAACTTTGCTGATGGGCTGGCCGTGGGCGCGGCCTTTGCATCCTCCTGGAAGACGGGGCTGGCCACCTCGCTGGCTGTGTTCTTCCACGAGCTGCCACACGAGCTGGGGGACTTCGCCGCTTTGCTGCACGCGGGTCTGTCGGTGCGGCGCGCTCTACTTCTGAACCTAGCTTCGGCGCTCACGGCCTTTGCCGGTCTCTACGTGGCACTCGGGGTCGGAATCGGCCAGGAGAGCGAGGCCTGGATCCTGGCGGTGGCCACTGGCCTCTTCCTCTACGTGGCGCTTTGTGACATGCTGCCGGCTATGCTGAACGTGCAGGACCAGCGCCCCTGGCTCCTCTTTCTGCTCCACAACGTGGGCCTGCTAGGCGGCTGGACTATCCTGCTGCTCCTGTCGCTGTACGAGGACAACATCGCCTTCTCATAG

Related Sequences

XP_004837771.1 Protein

Slc39a4 PREDICTED: zinc transporter ZIP4 isoform X3 [Heterocephalus glaber]

Length: 664 aa      View alignments
>XP_004837771.1
MVILVRLTPGLLLPMLLVSVTMAQPTHLLSLLTSGQGVLDLEALSSLLNTLADRVHCFNGPCGKCLSVEDALALGKPDKPDLTPATVLPSRFIVRLSAAMALYLSNPEGTCADIQAGRWASCADNFLHLLESPEAMTPGLNQLLQRIEAHAVRKLTREKTCIEVPQLLQEVVGAGAPSSPGPVLAALLDHVKSGACFHALPSPQYFVDFVFRQHSSEAPNMTLAELEALMQHLGVGGEAHGDHHDHDDRSQLGREANHQDPVPLDALNNSSSVWDTVCLSARDVMAVYGLSEQAGVSPEAWAQISPALLQQQLSGACNPQPKSPTQDQLSQAERYLYGSLATLLICLCAVFGLLLLTCTSCSTVTHYVMQTFLSLAVGALTGDALLHLTPKVLGLHTHGHGAEDHEHQEGVGAQVTWRLLAILGGLYLFFLFESLFSLLLPRDQDPEKARPCTHSSHSHGGHSHSTSLQLAPRELWQPKQPHEGSRTDLVAEESPELLHPEPRRLNPDLRLLPYLITLGDAVHNFADGLAVGAAFASSWKTGLATSLAVFFHELPHELGDFAALLHAGLSVRRALLLNLASALTAFAGLYVALGVGIGQESEAWILAVATGLFLYVALCDMLPAMLNVQDQRPWLLFLLHNVGLLGGWTILLLLSLYEDNIAFS