Details from NCBI annotation

Gene Symbol Vps28
Gene Name vacuolar protein sorting 28 homolog (S. cerevisiae)
Entrez Gene ID 101718157

Database interlinks

Part of NW_004624735.1 (Scaffold)

For more information consult the page for NW_004624735.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VPS28 ENSCPOG00000005756 (Guinea pig)

Gene Details

vacuolar protein sorting 28 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005190, Guinea pig)

Protein Percentage 99.55%
CDS Percentage 94.42%
Ka/Ks Ratio 0.00666 (Ka = 0.002, Ks = 0.2965)

VPS28 ENSG00000160948 (Human)

Gene Details

vacuolar protein sorting 28 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000366565, Human)

Protein Percentage 83.26%
CDS Percentage 81.9%
Ka/Ks Ratio 0.09177 (Ka = 0.1013, Ks = 1.104)

Vps28 ENSMUSG00000062381 (Mouse)

Gene Details

vacuolar protein sorting 28 (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000077856, Mouse)

Protein Percentage 98.64%
CDS Percentage 88.84%
Ka/Ks Ratio 0.00681 (Ka = 0.0059, Ks = 0.8655)

Vps28 ENSRNOG00000014633 (Rat)

Gene Details

vacuolar protein sorting 28 homolog (S. cerevisiae) (Vps28), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019707, Rat)

Protein Percentage 99.1%
CDS Percentage 89.74%
Ka/Ks Ratio 0.00542 (Ka = 0.0039, Ks = 0.7266)

Genome Location

Sequence Coding sequence

Length: 666 bp    Location: 12426709..12430698   Strand: +
>XM_004837711.1
ATGTTTCACGGGATCCCAGCCACTCCGGGTATGGGAGTCCCGGGGAACAAGCCAGAACTGTATGAGGAAGTGAAGTTGTATAAGAACGCCCGGGAGCGGGAGAAGTATGACAACATGGCAGAGCTGTTTGCAGTGGTGAAGACGATGCAGGCACTGGAGAAAGCATACATAAAGGACTGCGTCACCCCCAACGAGTACACTGCGGCCTGCTCTCGTCTCCTGGTCCAGTACAAAGCCGCCTTCCGGCAAGTTCAAGGCTCAGAAATCAGCTCCATTGATGAATTCTGCCGCAAGTTCCGACTGGACTGCCCACTGGCCATGGAAAGGATTAAAGAGGACCGACCCATCACCATCAAGGATGACAAGGGCAACCTCAACCGCTGCATTGCAGATGTGGTCTCGCTCTTCATCACAGTCATGGACAAGCTGCGCCTGGAGATTCGAGCCATGGATGAGATCCAGCCTGACCTGAGGGAGCTGATGGAGACCATGCACCGCATGAGCCACCTGCCCCCAGACTTTGAGGGCCGCCAGACAGTCAGCCAATGGCTGCAGACCCTGAGTGGCATGTCGGCCTCTGACGAGCTGGACGACTCCCAGGTACGCCAGATGCTCTTCGACCTGGAGTCAGCCTACAATGCTTTCAATCGCTTCCTGCACTCCTGA

Related Sequences

XP_004837768.1 Protein

Vps28 PREDICTED: vacuolar protein sorting-associated protein 28 homolog [Heterocephalus glaber]

Length: 221 aa      View alignments
>XP_004837768.1
MFHGIPATPGMGVPGNKPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVTPNEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAFNRFLHS